Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 Y_RNA.475-201ENST00000384345 101 ntBASIC-2.05□□□□□ -2.74
TRAV1-2A0A0B4J238 SNORD38.2-201ENST00000384470 69 ntBASIC-2.05□□□□□ -2.74
TRAV1-2A0A0B4J238 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-2.05□□□□□ -2.74
TRAV1-2A0A0B4J238 SNORA79-201ENST00000408376 140 ntBASIC-2.05□□□□□ -2.74
TRAV1-2A0A0B4J238 FGF7P6-202ENST00000451282 293 ntBASIC-2.05□□□□□ -2.74
TRAV1-2A0A0B4J238 HSPE1P25-201ENST00000455484 251 ntBASIC-2.05□□□□□ -2.74
TRAV1-2A0A0B4J238 SNORD116-25-201ENST00000516517 92 ntBASIC-2.05□□□□□ -2.74
TRAV1-2A0A0B4J238 RNU6-1233P-201ENST00000362922 102 ntBASIC-2.06□□□□□ -2.74
TRAV1-2A0A0B4J238 RNY1P11-201ENST00000363759 113 ntBASIC-2.06□□□□□ -2.74
TRAV1-2A0A0B4J238 Y_RNA.250-201ENST00000364542 110 ntBASIC-2.06□□□□□ -2.74
TRAV1-2A0A0B4J238 RNU6-662P-201ENST00000384253 104 ntBASIC-2.06□□□□□ -2.74
TRAV1-2A0A0B4J238 MIR507-201ENST00000385234 94 ntBASIC-2.06□□□□□ -2.74
TRAV1-2A0A0B4J238 RNU4-43P-201ENST00000410628 137 ntBASIC-2.06□□□□□ -2.74
TRAV1-2A0A0B4J238 AL353691.2-201ENST00000443795 59 ntBASIC-2.06□□□□□ -2.74
TRAV1-2A0A0B4J238 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC-2.06□□□□□ -2.74
TRAV1-2A0A0B4J238 RNA5SP236-201ENST00000516169 116 ntBASIC-2.06□□□□□ -2.74
TRAV1-2A0A0B4J238 AC048344.4-201ENST00000619744 527 ntBASIC-2.06□□□□□ -2.74
TRAV1-2A0A0B4J238 Y_RNA.173-201ENST00000363776 113 ntBASIC-2.07□□□□□ -2.74
TRAV1-2A0A0B4J238 RNU6-312P-201ENST00000364629 107 ntBASIC-2.07□□□□□ -2.74
TRAV1-2A0A0B4J238 RNU4-17P-201ENST00000365598 141 ntBASIC-2.07□□□□□ -2.74
TRAV1-2A0A0B4J238 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-2.07□□□□□ -2.74
TRAV1-2A0A0B4J238 Y_RNA.646-201ENST00000410980 101 ntBASIC-2.07□□□□□ -2.74
TRAV1-2A0A0B4J238 Y_RNA.639-201ENST00000458981 102 ntBASIC-2.07□□□□□ -2.74
TRAV1-2A0A0B4J238 U8.20-201ENST00000459445 131 ntBASIC-2.07□□□□□ -2.74
TRAV1-2A0A0B4J238 RNU7-123P-201ENST00000515911 60 ntBASIC-2.07□□□□□ -2.74
TRAV1-2A0A0B4J238 RNU6-1247P-201ENST00000516622 98 ntBASIC-2.07□□□□□ -2.74
TRAV1-2A0A0B4J238 AC015540.1-201ENST00000615828 501 ntBASIC-2.07□□□□□ -2.74
TRAV1-2A0A0B4J238 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-2.07□□□□□ -2.74
TRAV1-2A0A0B4J238 SNORD113-8-201ENST00000363497 74 ntBASIC-2.08□□□□□ -2.74
TRAV1-2A0A0B4J238 Y_RNA.359-201ENST00000365498 102 ntBASIC-2.08□□□□□ -2.74
TRAV1-2A0A0B4J238 RNU6-259P-201ENST00000383999 107 ntBASIC-2.08□□□□□ -2.74
TRAV1-2A0A0B4J238 AC099799.1-201ENST00000439809 192 ntBASIC-2.08□□□□□ -2.74
TRAV1-2A0A0B4J238 RNU7-164P-201ENST00000459221 62 ntBASIC-2.08□□□□□ -2.74
TRAV1-2A0A0B4J238 Y_RNA.684-201ENST00000516510 99 ntBASIC-2.08□□□□□ -2.74
TRAV1-2A0A0B4J238 MIR4272-201ENST00000635924 64 ntBASIC-2.08□□□□□ -2.74
TRAV1-2A0A0B4J238 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-2.08□□□□□ -2.74
TRAV1-2A0A0B4J238 RNU6-495P-201ENST00000362995 107 ntBASIC-2.09□□□□□ -2.74
TRAV1-2A0A0B4J238 RNU6-990P-201ENST00000364385 104 ntBASIC-2.09□□□□□ -2.74
TRAV1-2A0A0B4J238 RNU6-310P-201ENST00000384655 107 ntBASIC-2.09□□□□□ -2.74
TRAV1-2A0A0B4J238 SNORD75.2-201ENST00000408784 58 ntBASIC-2.09□□□□□ -2.74
TRAV1-2A0A0B4J238 Y_RNA.613-201ENST00000410726 97 ntBASIC-2.09□□□□□ -2.74
TRAV1-2A0A0B4J238 RNU6-1333P-201ENST00000516162 93 ntBASIC-2.09□□□□□ -2.74
TRAV1-2A0A0B4J238 RNU6-720P-201ENST00000516363 108 ntBASIC-2.09□□□□□ -2.74
TRAV1-2A0A0B4J238 Y_RNA.678-201ENST00000516408 96 ntBASIC-2.09□□□□□ -2.74
TRAV1-2A0A0B4J238 RNU6-118P-201ENST00000516552 102 ntBASIC-2.09□□□□□ -2.74
TRAV1-2A0A0B4J238 AC021443.1-201ENST00000604478 211 ntBASIC-2.09□□□□□ -2.74
TRAV1-2A0A0B4J238 UBE2WP1-201ENST00000362030 340 ntBASIC-2.1□□□□□ -2.75
TRAV1-2A0A0B4J238 RNU6-80P-201ENST00000384195 107 ntBASIC-2.1□□□□□ -2.75
TRAV1-2A0A0B4J238 Y_RNA.461-201ENST00000384263 103 ntBASIC-2.1□□□□□ -2.75
TRAV1-2A0A0B4J238 MIR496-201ENST00000385226 102 ntBASIC-2.1□□□□□ -2.75
TRAV1-2A0A0B4J238 RNU6-130P-201ENST00000411112 103 ntBASIC-2.1□□□□□ -2.75
TRAV1-2A0A0B4J238 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-2.1□□□□□ -2.75
TRAV1-2A0A0B4J238 Y_RNA.679-201ENST00000516416 91 ntBASIC-2.1□□□□□ -2.75
TRAV1-2A0A0B4J238 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-2.1□□□□□ -2.75
TRAV1-2A0A0B4J238 AC119751.7-201ENST00000600494 245 ntBASIC-2.1□□□□□ -2.75
TRAV1-2A0A0B4J238 RNU6-890P-201ENST00000384121 107 ntBASIC-2.11□□□□□ -2.75
TRAV1-2A0A0B4J238 DEFB108C-201ENST00000400154 252 ntBASIC-2.11□□□□□ -2.75
TRAV1-2A0A0B4J238 AC108019.1-201ENST00000512540 175 ntBASIC-2.11□□□□□ -2.75
TRAV1-2A0A0B4J238 AC138907.4-201ENST00000570107 226 ntBASIC-2.11□□□□□ -2.75
TRAV1-2A0A0B4J238 RPS29P30-201ENST00000600975 111 ntBASIC-2.11□□□□□ -2.75
TRAV1-2A0A0B4J238 DLEU2_3.1-201ENST00000620005 73 ntBASIC-2.11□□□□□ -2.75
TRAV1-2A0A0B4J238 RNU4-90P-201ENST00000362773 141 ntBASIC-2.12□□□□□ -2.75
TRAV1-2A0A0B4J238 Y_RNA.346-201ENST00000365385 112 ntBASIC-2.12□□□□□ -2.75
TRAV1-2A0A0B4J238 RNU6-211P-201ENST00000384047 107 ntBASIC-2.12□□□□□ -2.75
TRAV1-2A0A0B4J238 Y_RNA.553-201ENST00000384670 102 ntBASIC-2.12□□□□□ -2.75
TRAV1-2A0A0B4J238 AC113618.1-201ENST00000416747 285 ntBASIC-2.12□□□□□ -2.75
TRAV1-2A0A0B4J238 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC-2.12□□□□□ -2.75
TRAV1-2A0A0B4J238 RNU6-240P-201ENST00000516098 97 ntBASIC-2.12□□□□□ -2.75
TRAV1-2A0A0B4J238 RNU6-168P-201ENST00000516189 101 ntBASIC-2.12□□□□□ -2.75
TRAV1-2A0A0B4J238 FAS-AS1.1-201ENST00000615327 126 ntBASIC-2.12□□□□□ -2.75
TRAV1-2A0A0B4J238 Y_RNA.10-201ENST00000362371 110 ntBASIC-2.13□□□□□ -2.75
TRAV1-2A0A0B4J238 Y_RNA.64-201ENST00000362845 102 ntBASIC-2.13□□□□□ -2.75
TRAV1-2A0A0B4J238 SNORD115-27-201ENST00000364430 82 ntBASIC-2.13□□□□□ -2.75
TRAV1-2A0A0B4J238 Y_RNA.441-201ENST00000384123 112 ntBASIC-2.13□□□□□ -2.75
TRAV1-2A0A0B4J238 RNU6-510P-201ENST00000391239 108 ntBASIC-2.13□□□□□ -2.75
TRAV1-2A0A0B4J238 MIR1255B2-201ENST00000408618 67 ntBASIC-2.13□□□□□ -2.75
TRAV1-2A0A0B4J238 RNU6-1052P-201ENST00000411398 104 ntBASIC-2.13□□□□□ -2.75
TRAV1-2A0A0B4J238 MTND4LP30-201ENST00000454092 297 ntBASIC-2.13□□□□□ -2.75
TRAV1-2A0A0B4J238 RNU6-719P-201ENST00000516671 104 ntBASIC-2.13□□□□□ -2.75
TRAV1-2A0A0B4J238 MIR4756-201ENST00000577874 78 ntBASIC-2.13□□□□□ -2.75
TRAV1-2A0A0B4J238 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-2.13□□□□□ -2.75
TRAV1-2A0A0B4J238 SNORD115-19-201ENST00000363098 82 ntBASIC-2.14□□□□□ -2.75
TRAV1-2A0A0B4J238 SNORD115-18-201ENST00000363293 82 ntBASIC-2.14□□□□□ -2.75
TRAV1-2A0A0B4J238 Y_RNA.190-201ENST00000363964 101 ntBASIC-2.14□□□□□ -2.75
TRAV1-2A0A0B4J238 SNORD115-17-201ENST00000364612 82 ntBASIC-2.14□□□□□ -2.75
TRAV1-2A0A0B4J238 RNU6-119P-201ENST00000364882 107 ntBASIC-2.14□□□□□ -2.75
TRAV1-2A0A0B4J238 Y_RNA.528-201ENST00000384575 108 ntBASIC-2.14□□□□□ -2.75
TRAV1-2A0A0B4J238 MIR559-201ENST00000385188 96 ntBASIC-2.14□□□□□ -2.75
TRAV1-2A0A0B4J238 RNU4-14P-201ENST00000410858 122 ntBASIC-2.14□□□□□ -2.75
TRAV1-2A0A0B4J238 RNU6-521P-201ENST00000516663 105 ntBASIC-2.14□□□□□ -2.75
TRAV1-2A0A0B4J238 Y_RNA.298-201ENST00000364960 107 ntBASIC-2.15□□□□□ -2.75
TRAV1-2A0A0B4J238 Y_RNA.394-201ENST00000383942 103 ntBASIC-2.15□□□□□ -2.75
TRAV1-2A0A0B4J238 Y_RNA.541-201ENST00000384640 113 ntBASIC-2.15□□□□□ -2.75
TRAV1-2A0A0B4J238 Y_RNA.602-201ENST00000410535 92 ntBASIC-2.15□□□□□ -2.75
TRAV1-2A0A0B4J238 AC090616.4-201ENST00000448026 115 ntBASIC-2.15□□□□□ -2.75
TRAV1-2A0A0B4J238 RNU6-75P-201ENST00000515944 104 ntBASIC-2.15□□□□□ -2.75
TRAV1-2A0A0B4J238 AC109635.3-201ENST00000529536 185 ntBASIC-2.15□□□□□ -2.75
TRAV1-2A0A0B4J238 AP002795.1-201ENST00000534879 84 ntBASIC-2.15□□□□□ -2.75
TRAV1-2A0A0B4J238 Y_RNA.804-201ENST00000615262 101 ntBASIC-2.15□□□□□ -2.75
TRAV1-2A0A0B4J238 AP000720.1-201ENST00000625091 483 ntBASIC-2.15□□□□□ -2.75
Retrieved 100 of 98,524 protein–RNA pairs in 140.5 ms