Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 SNORD42B-201ENST00000458893 67 ntBASIC-1.7□□□□□ -2.68
TRAV27A0A087WT01 Y_RNA.688-201ENST00000516565 95 ntBASIC-1.7□□□□□ -2.68
TRAV27A0A087WT01 MIR3908-201ENST00000579798 126 ntBASIC-1.7□□□□□ -2.68
TRAV27A0A087WT01 U4.5-201ENST00000617137 123 ntBASIC-1.7□□□□□ -2.68
TRAV27A0A087WT01 Y_RNA.275-201ENST00000364726 110 ntBASIC-1.71□□□□□ -2.68
TRAV27A0A087WT01 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.71□□□□□ -2.68
TRAV27A0A087WT01 Y_RNA.16-201ENST00000362421 102 ntBASIC-1.72□□□□□ -2.68
TRAV27A0A087WT01 Y_RNA.173-201ENST00000363776 113 ntBASIC-1.72□□□□□ -2.68
TRAV27A0A087WT01 SNORA63.6-201ENST00000364921 119 ntBASIC-1.72□□□□□ -2.68
TRAV27A0A087WT01 Y_RNA.298-201ENST00000364960 107 ntBASIC-1.72□□□□□ -2.68
TRAV27A0A087WT01 SNORD116-1-201ENST00000384335 95 ntBASIC-1.72□□□□□ -2.68
TRAV27A0A087WT01 RNU6-718P-201ENST00000516166 105 ntBASIC-1.72□□□□□ -2.68
TRAV27A0A087WT01 RNU6-479P-201ENST00000516348 105 ntBASIC-1.72□□□□□ -2.68
TRAV27A0A087WT01 AC090574.1-201ENST00000623186 233 ntBASIC-1.72□□□□□ -2.68
TRAV27A0A087WT01 RNU6-208P-201ENST00000362431 107 ntBASIC-1.73□□□□□ -2.69
TRAV27A0A087WT01 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.73□□□□□ -2.69
TRAV27A0A087WT01 MIR451A-201ENST00000385059 72 ntBASIC-1.73□□□□□ -2.69
TRAV27A0A087WT01 Y_RNA.677-201ENST00000516401 85 ntBASIC-1.73□□□□□ -2.69
TRAV27A0A087WT01 Y_RNA.718-201ENST00000517110 102 ntBASIC-1.73□□□□□ -2.69
TRAV27A0A087WT01 AL627230.5-201ENST00000619807 58 ntBASIC-1.73□□□□□ -2.69
TRAV27A0A087WT01 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-1.73□□□□□ -2.69
TRAV27A0A087WT01 Y_RNA.5-201ENST00000362334 102 ntBASIC-1.74□□□□□ -2.69
TRAV27A0A087WT01 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.74□□□□□ -2.69
TRAV27A0A087WT01 Y_RNA.194-201ENST00000363985 102 ntBASIC-1.74□□□□□ -2.69
TRAV27A0A087WT01 MIR601-201ENST00000385256 79 ntBASIC-1.74□□□□□ -2.69
TRAV27A0A087WT01 RNU6-466P-201ENST00000391224 103 ntBASIC-1.74□□□□□ -2.69
TRAV27A0A087WT01 MIR548F1-201ENST00000408667 84 ntBASIC-1.74□□□□□ -2.69
TRAV27A0A087WT01 Y_RNA.700-201ENST00000516806 100 ntBASIC-1.74□□□□□ -2.69
TRAV27A0A087WT01 AC092794.1-201ENST00000612734 582 ntBASIC-1.74□□□□□ -2.69
TRAV27A0A087WT01 RNU6-235P-201ENST00000362644 107 ntBASIC-1.75□□□□□ -2.69
TRAV27A0A087WT01 RNU6-103P-201ENST00000363686 107 ntBASIC-1.75□□□□□ -2.69
TRAV27A0A087WT01 RNU4-24P-201ENST00000364565 139 ntBASIC-1.75□□□□□ -2.69
TRAV27A0A087WT01 SNORA63.7-201ENST00000365579 123 ntBASIC-1.75□□□□□ -2.69
TRAV27A0A087WT01 RNU4-17P-201ENST00000365598 141 ntBASIC-1.75□□□□□ -2.69
TRAV27A0A087WT01 MIR1302-11-201ENST00000408051 138 ntBASIC-1.75□□□□□ -2.69
TRAV27A0A087WT01 MIR1302-9-201ENST00000408365 138 ntBASIC-1.75□□□□□ -2.69
TRAV27A0A087WT01 MIR1302-10-201ENST00000408734 138 ntBASIC-1.75□□□□□ -2.69
TRAV27A0A087WT01 MIR1302-2-201ENST00000607096 138 ntBASIC-1.75□□□□□ -2.69
TRAV27A0A087WT01 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-1.75□□□□□ -2.69
TRAV27A0A087WT01 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.75□□□□□ -2.69
TRAV27A0A087WT01 MIR198-201ENST00000637333 62 ntBASIC-1.75□□□□□ -2.69
TRAV27A0A087WT01 Y_RNA.187-201ENST00000363918 113 ntBASIC-1.76□□□□□ -2.69
TRAV27A0A087WT01 Y_RNA.279-201ENST00000364763 95 ntBASIC-1.76□□□□□ -2.69
TRAV27A0A087WT01 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.76□□□□□ -2.69
TRAV27A0A087WT01 RNU6-1104P-201ENST00000384723 104 ntBASIC-1.76□□□□□ -2.69
TRAV27A0A087WT01 RNU6-651P-201ENST00000411040 105 ntBASIC-1.76□□□□□ -2.69
TRAV27A0A087WT01 RNU7-134P-201ENST00000458997 64 ntBASIC-1.76□□□□□ -2.69
TRAV27A0A087WT01 RNU6-521P-201ENST00000516663 105 ntBASIC-1.76□□□□□ -2.69
TRAV27A0A087WT01 AC068339.1-201ENST00000526965 141 ntBASIC-1.76□□□□□ -2.69
TRAV27A0A087WT01 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-1.76□□□□□ -2.69
TRAV27A0A087WT01 AP002392.1-201ENST00000537692 208 ntBASIC-1.76□□□□□ -2.69
TRAV27A0A087WT01 AL365265.1-201ENST00000621045 234 ntBASIC-1.76□□□□□ -2.69
TRAV27A0A087WT01 SNORD2.1-201ENST00000458762 69 ntBASIC-1.77□□□□□ -2.69
TRAV27A0A087WT01 SCARNA24.2-201ENST00000516968 130 ntBASIC-1.77□□□□□ -2.69
TRAV27A0A087WT01 MIR4464-201ENST00000580818 92 ntBASIC-1.77□□□□□ -2.69
TRAV27A0A087WT01 AC138207.3-201ENST00000585289 166 ntBASIC-1.77□□□□□ -2.69
TRAV27A0A087WT01 Y_RNA.387-201ENST00000383918 102 ntBASIC-1.78□□□□□ -2.69
TRAV27A0A087WT01 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-1.78□□□□□ -2.69
TRAV27A0A087WT01 MIR4744-201ENST00000581563 82 ntBASIC-1.78□□□□□ -2.69
TRAV27A0A087WT01 YWHAEP3-201ENST00000582767 121 ntBASIC-1.78□□□□□ -2.69
TRAV27A0A087WT01 Y_RNA.160-201ENST00000363677 92 ntBASIC-1.79□□□□□ -2.7
TRAV27A0A087WT01 RNU6-647P-201ENST00000364243 107 ntBASIC-1.79□□□□□ -2.7
TRAV27A0A087WT01 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.79□□□□□ -2.7
TRAV27A0A087WT01 Y_RNA.516-201ENST00000384541 124 ntBASIC-1.79□□□□□ -2.7
TRAV27A0A087WT01 RNU7-152P-201ENST00000458982 64 ntBASIC-1.79□□□□□ -2.7
TRAV27A0A087WT01 RNU6-643P-201ENST00000384018 107 ntBASIC-1.8□□□□□ -2.7
TRAV27A0A087WT01 RNU6-576P-201ENST00000390854 102 ntBASIC-1.8□□□□□ -2.7
TRAV27A0A087WT01 U3.27-201ENST00000391237 200 ntBASIC-1.8□□□□□ -2.7
TRAV27A0A087WT01 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-1.8□□□□□ -2.7
TRAV27A0A087WT01 RNU6-976P-201ENST00000516086 111 ntBASIC-1.8□□□□□ -2.7
TRAV27A0A087WT01 AL353803.5-201ENST00000599815 141 ntBASIC-1.8□□□□□ -2.7
TRAV27A0A087WT01 Y_RNA.3-201ENST00000362331 103 ntBASIC-1.81□□□□□ -2.7
TRAV27A0A087WT01 MIR8485-201ENST00000401372 91 ntBASIC-1.81□□□□□ -2.7
TRAV27A0A087WT01 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-1.81□□□□□ -2.7
TRAV27A0A087WT01 MTND3P22-201ENST00000510932 243 ntBASIC-1.81□□□□□ -2.7
TRAV27A0A087WT01 SNORA40.15-201ENST00000516884 107 ntBASIC-1.81□□□□□ -2.7
TRAV27A0A087WT01 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-1.81□□□□□ -2.7
TRAV27A0A087WT01 AL445584.3-201ENST00000617173 78 ntBASIC-1.81□□□□□ -2.7
TRAV27A0A087WT01 MIR6888-201ENST00000621977 67 ntBASIC-1.81□□□□□ -2.7
TRAV27A0A087WT01 RNU6-450P-201ENST00000364654 107 ntBASIC-1.82□□□□□ -2.7
TRAV27A0A087WT01 RNU6-746P-201ENST00000384112 109 ntBASIC-1.82□□□□□ -2.7
TRAV27A0A087WT01 MIR29B1-201ENST00000385015 81 ntBASIC-1.82□□□□□ -2.7
TRAV27A0A087WT01 RNU6-578P-201ENST00000390980 103 ntBASIC-1.82□□□□□ -2.7
TRAV27A0A087WT01 MIR1285-2-201ENST00000408311 88 ntBASIC-1.82□□□□□ -2.7
TRAV27A0A087WT01 Y_RNA.793-201ENST00000411222 111 ntBASIC-1.82□□□□□ -2.7
TRAV27A0A087WT01 RNU4-61P-201ENST00000411243 107 ntBASIC-1.82□□□□□ -2.7
TRAV27A0A087WT01 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.82□□□□□ -2.7
TRAV27A0A087WT01 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-1.82□□□□□ -2.7
TRAV27A0A087WT01 RNA5SP180-201ENST00000516181 101 ntBASIC-1.82□□□□□ -2.7
TRAV27A0A087WT01 RNU6-719P-201ENST00000516671 104 ntBASIC-1.82□□□□□ -2.7
TRAV27A0A087WT01 RNY4P20-201ENST00000516678 93 ntBASIC-1.82□□□□□ -2.7
TRAV27A0A087WT01 MIR4308-201ENST00000580634 81 ntBASIC-1.82□□□□□ -2.7
TRAV27A0A087WT01 Y_RNA.773-201ENST00000607168 90 ntBASIC-1.82□□□□□ -2.7
TRAV27A0A087WT01 MIR6818-201ENST00000621576 65 ntBASIC-1.82□□□□□ -2.7
TRAV27A0A087WT01 U6.96-201ENST00000636425 70 ntBASIC-1.82□□□□□ -2.7
TRAV27A0A087WT01 Y_RNA.44-201ENST00000362676 108 ntBASIC-1.83□□□□□ -2.7
TRAV27A0A087WT01 Y_RNA.82-201ENST00000363000 102 ntBASIC-1.83□□□□□ -2.7
TRAV27A0A087WT01 Y_RNA.92-201ENST00000363043 102 ntBASIC-1.83□□□□□ -2.7
TRAV27A0A087WT01 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.83□□□□□ -2.7
TRAV27A0A087WT01 Y_RNA.235-201ENST00000364412 102 ntBASIC-1.83□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 235.9 ms