Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 MIR203A-201ENST00000384836 110 ntBASIC3.13□□□□□ -1.91
TRIM35Q9UPQ4 MIR1257-201ENST00000408490 117 ntBASIC3.13□□□□□ -1.91
TRIM35Q9UPQ4 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC3.13□□□□□ -1.91
TRIM35Q9UPQ4 UBBP3-201ENST00000445497 241 ntBASIC3.13□□□□□ -1.91
TRIM35Q9UPQ4 IGLVVI-22-1-201ENST00000521183 211 ntBASIC3.13□□□□□ -1.91
TRIM35Q9UPQ4 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
TRIM35Q9UPQ4 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.13□□□□□ -1.91
TRIM35Q9UPQ4 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TRIM35Q9UPQ4 SNORD60.1-201ENST00000362451 73 ntBASIC3.12□□□□□ -1.91
TRIM35Q9UPQ4 RNU6-753P-201ENST00000363926 107 ntBASIC3.12□□□□□ -1.91
TRIM35Q9UPQ4 RNU6-302P-201ENST00000365249 107 ntBASIC3.12□□□□□ -1.91
TRIM35Q9UPQ4 MIR513A1-201ENST00000385138 129 ntBASIC3.12□□□□□ -1.91
TRIM35Q9UPQ4 RNA5SP95-201ENST00000410319 137 ntBASIC3.12□□□□□ -1.91
TRIM35Q9UPQ4 snoU13.25-201ENST00000458945 104 ntBASIC3.12□□□□□ -1.91
TRIM35Q9UPQ4 AP003716.2-201ENST00000528260 108 ntBASIC3.12□□□□□ -1.91
TRIM35Q9UPQ4 NAMPTP3-201ENST00000569273 224 ntBASIC3.12□□□□□ -1.91
TRIM35Q9UPQ4 SNORA75.1-201ENST00000391130 148 ntBASIC3.11□□□□□ -1.91
TRIM35Q9UPQ4 AC092427.1-202ENST00000430569 476 ntBASIC3.11□□□□□ -1.91
TRIM35Q9UPQ4 MIR1185-1-201ENST00000408598 86 ntBASIC3.1□□□□□ -1.91
TRIM35Q9UPQ4 RN7SL499P-201ENST00000481141 276 ntBASIC3.1□□□□□ -1.91
TRIM35Q9UPQ4 MIR3657-201ENST00000584818 117 ntBASIC3.1□□□□□ -1.91
TRIM35Q9UPQ4 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
TRIM35Q9UPQ4 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
TRIM35Q9UPQ4 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.09□□□□□ -1.91
TRIM35Q9UPQ4 RNA5SP126-201ENST00000365092 109 ntBASIC3.09□□□□□ -1.91
TRIM35Q9UPQ4 SNORA31.26-201ENST00000517250 137 ntBASIC3.09□□□□□ -1.91
TRIM35Q9UPQ4 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
TRIM35Q9UPQ4 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
TRIM35Q9UPQ4 U8.9-201ENST00000365667 134 ntBASIC3.08□□□□□ -1.92
TRIM35Q9UPQ4 MIR7-2-201ENST00000384970 110 ntBASIC3.08□□□□□ -1.92
TRIM35Q9UPQ4 MIR216B-201ENST00000390186 82 ntBASIC3.08□□□□□ -1.92
TRIM35Q9UPQ4 MIR4513-201ENST00000581077 86 ntBASIC3.08□□□□□ -1.92
TRIM35Q9UPQ4 GHRLOS.1-201ENST00000610995 70 ntBASIC3.08□□□□□ -1.92
TRIM35Q9UPQ4 uc_338.10-201ENST00000621872 182 ntBASIC3.08□□□□□ -1.92
TRIM35Q9UPQ4 Z82195.2-201ENST00000612348 18351 ntBASIC3.07□□□□□ -1.92
TRIM35Q9UPQ4 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
TRIM35Q9UPQ4 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
TRIM35Q9UPQ4 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC3.07□□□□□ -1.92
TRIM35Q9UPQ4 SNORD114-30-201ENST00000364448 72 ntBASIC3.07□□□□□ -1.92
TRIM35Q9UPQ4 AL161935.2-201ENST00000414627 60 ntBASIC3.07□□□□□ -1.92
TRIM35Q9UPQ4 AL133373.1-201ENST00000497098 94 ntBASIC3.07□□□□□ -1.92
TRIM35Q9UPQ4 RNU6-1089P-201ENST00000516473 104 ntBASIC3.07□□□□□ -1.92
TRIM35Q9UPQ4 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
TRIM35Q9UPQ4 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.06□□□□□ -1.92
TRIM35Q9UPQ4 MIR103A2-201ENST00000362154 78 ntBASIC3.06□□□□□ -1.92
TRIM35Q9UPQ4 MIR5007-201ENST00000583098 95 ntBASIC3.06□□□□□ -1.92
TRIM35Q9UPQ4 DLEU2_4.2-201ENST00000616613 58 ntBASIC3.06□□□□□ -1.92
TRIM35Q9UPQ4 ZNF658B-202ENST00000615961 3375 ntBASIC3.05□□□□□ -1.92
TRIM35Q9UPQ4 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
TRIM35Q9UPQ4 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
TRIM35Q9UPQ4 RNU6-656P-201ENST00000516785 107 ntBASIC3.04□□□□□ -1.92
TRIM35Q9UPQ4 RNU6-250P-201ENST00000516958 103 ntBASIC3.04□□□□□ -1.92
TRIM35Q9UPQ4 GS1-279B7.1-204ENST00000641809 378 ntBASIC3.04□□□□□ -1.92
TRIM35Q9UPQ4 MIR6073-201ENST00000352083 89 ntBASIC3.03□□□□□ -1.92
TRIM35Q9UPQ4 RNA5SP264-201ENST00000363115 107 ntBASIC3.03□□□□□ -1.92
TRIM35Q9UPQ4 RNA5SP245-201ENST00000364239 121 ntBASIC3.03□□□□□ -1.92
TRIM35Q9UPQ4 RNU6-260P-201ENST00000384092 107 ntBASIC3.03□□□□□ -1.92
TRIM35Q9UPQ4 RNU6-520P-201ENST00000384717 104 ntBASIC3.03□□□□□ -1.92
TRIM35Q9UPQ4 SNORA3.2-201ENST00000408221 125 ntBASIC3.03□□□□□ -1.92
TRIM35Q9UPQ4 RNU4-53P-201ENST00000410828 140 ntBASIC3.03□□□□□ -1.92
TRIM35Q9UPQ4 AC244505.6-201ENST00000452829 130 ntBASIC3.03□□□□□ -1.92
TRIM35Q9UPQ4 MIR548AD-201ENST00000584780 82 ntBASIC3.03□□□□□ -1.92
TRIM35Q9UPQ4 AC106800.4-201ENST00000614905 153 ntBASIC3.03□□□□□ -1.92
TRIM35Q9UPQ4 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
TRIM35Q9UPQ4 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
TRIM35Q9UPQ4 DEFA7P-201ENST00000382676 285 ntBASIC3.02□□□□□ -1.93
TRIM35Q9UPQ4 RNU6-947P-201ENST00000516264 106 ntBASIC3.02□□□□□ -1.93
TRIM35Q9UPQ4 SNORD53-201ENST00000579969 78 ntBASIC3.02□□□□□ -1.93
TRIM35Q9UPQ4 MIR3670-2-201ENST00000582974 65 ntBASIC3.02□□□□□ -1.93
TRIM35Q9UPQ4 MIR3670-1-201ENST00000584160 65 ntBASIC3.02□□□□□ -1.93
TRIM35Q9UPQ4 MIR548V-201ENST00000584165 80 ntBASIC3.02□□□□□ -1.93
TRIM35Q9UPQ4 MIR3670-3-201ENST00000584855 65 ntBASIC3.02□□□□□ -1.93
TRIM35Q9UPQ4 MIR3670-4-201ENST00000612260 65 ntBASIC3.02□□□□□ -1.93
TRIM35Q9UPQ4 AC010297.1-201ENST00000623948 149 ntBASIC3.02□□□□□ -1.93
TRIM35Q9UPQ4 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC3.01□□□□□ -1.93
TRIM35Q9UPQ4 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
TRIM35Q9UPQ4 RNU6-535P-201ENST00000384722 107 ntBASIC3.01□□□□□ -1.93
TRIM35Q9UPQ4 RNU6ATAC6P-201ENST00000408132 126 ntBASIC3.01□□□□□ -1.93
TRIM35Q9UPQ4 snoU13.21-201ENST00000459368 105 ntBASIC3.01□□□□□ -1.93
TRIM35Q9UPQ4 AC008413.1-201ENST00000511864 177 ntBASIC3.01□□□□□ -1.93
TRIM35Q9UPQ4 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC3.01□□□□□ -1.93
TRIM35Q9UPQ4 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
TRIM35Q9UPQ4 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3□□□□□ -1.93
TRIM35Q9UPQ4 SNORA2.1-201ENST00000363089 137 ntBASIC3□□□□□ -1.93
TRIM35Q9UPQ4 RNU7-13P-201ENST00000516413 62 ntBASIC3□□□□□ -1.93
TRIM35Q9UPQ4 RNU6-56P-201ENST00000516986 93 ntBASIC3□□□□□ -1.93
TRIM35Q9UPQ4 RNU6-902P-201ENST00000517212 91 ntBASIC3□□□□□ -1.93
TRIM35Q9UPQ4 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC3□□□□□ -1.93
TRIM35Q9UPQ4 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
TRIM35Q9UPQ4 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
TRIM35Q9UPQ4 MIR125B2-201ENST00000385128 89 ntBASIC2.99□□□□□ -1.93
TRIM35Q9UPQ4 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.99□□□□□ -1.93
TRIM35Q9UPQ4 RNU1-41P-201ENST00000516161 162 ntBASIC2.99□□□□□ -1.93
TRIM35Q9UPQ4 RNU1-48P-201ENST00000516400 162 ntBASIC2.99□□□□□ -1.93
TRIM35Q9UPQ4 AL645939.4-201ENST00000604495 135 ntBASIC2.99□□□□□ -1.93
TRIM35Q9UPQ4 MIR6766-201ENST00000622641 72 ntBASIC2.99□□□□□ -1.93
TRIM35Q9UPQ4 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
TRIM35Q9UPQ4 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
TRIM35Q9UPQ4 RNU6-1126P-201ENST00000384002 107 ntBASIC2.98□□□□□ -1.93
TRIM35Q9UPQ4 AC008608.1-201ENST00000603910 127 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 187.3 ms