Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.29□□□□□ -2.04
PCDHGC3Q9UN70 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
PCDHGC3Q9UN70 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.29□□□□□ -2.04
PCDHGC3Q9UN70 RNU6-664P-201ENST00000362381 107 ntBASIC2.29□□□□□ -2.04
PCDHGC3Q9UN70 Y_RNA.42-201ENST00000362660 108 ntBASIC2.29□□□□□ -2.04
PCDHGC3Q9UN70 Y_RNA.330-201ENST00000365230 109 ntBASIC2.29□□□□□ -2.04
PCDHGC3Q9UN70 SNORD101-201ENST00000384027 73 ntBASIC2.29□□□□□ -2.04
PCDHGC3Q9UN70 Y_RNA.532-201ENST00000384590 113 ntBASIC2.29□□□□□ -2.04
PCDHGC3Q9UN70 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
PCDHGC3Q9UN70 SNORD111-201ENST00000408139 94 ntBASIC2.29□□□□□ -2.04
PCDHGC3Q9UN70 SNORD83.1-201ENST00000411362 77 ntBASIC2.29□□□□□ -2.04
PCDHGC3Q9UN70 RNU6-1015P-201ENST00000517121 99 ntBASIC2.29□□□□□ -2.04
PCDHGC3Q9UN70 RNU6-165P-201ENST00000517170 99 ntBASIC2.29□□□□□ -2.04
PCDHGC3Q9UN70 AL512310.8-201ENST00000550183 120 ntBASIC2.29□□□□□ -2.04
PCDHGC3Q9UN70 Y_RNA.500-201ENST00000384466 111 ntBASIC2.28□□□□□ -2.04
PCDHGC3Q9UN70 SNORD53-201ENST00000579969 78 ntBASIC2.28□□□□□ -2.04
PCDHGC3Q9UN70 RNU6-681P-201ENST00000364012 104 ntBASIC2.27□□□□□ -2.05
PCDHGC3Q9UN70 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.27□□□□□ -2.05
PCDHGC3Q9UN70 AC036111.3-201ENST00000526389 112 ntBASIC2.27□□□□□ -2.05
PCDHGC3Q9UN70 AL627230.6-201ENST00000611129 280 ntBASIC2.27□□□□□ -2.05
PCDHGC3Q9UN70 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
PCDHGC3Q9UN70 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
PCDHGC3Q9UN70 Y_RNA.596-201ENST00000410462 109 ntBASIC2.26□□□□□ -2.05
PCDHGC3Q9UN70 RNU6-634P-201ENST00000459134 106 ntBASIC2.26□□□□□ -2.05
PCDHGC3Q9UN70 RNA5SP233-201ENST00000459153 113 ntBASIC2.26□□□□□ -2.05
PCDHGC3Q9UN70 snoU13.21-201ENST00000459368 105 ntBASIC2.26□□□□□ -2.05
PCDHGC3Q9UN70 MIR4771-2-201ENST00000577758 74 ntBASIC2.26□□□□□ -2.05
PCDHGC3Q9UN70 MIR4696-201ENST00000581431 70 ntBASIC2.26□□□□□ -2.05
PCDHGC3Q9UN70 MIR4771-1-201ENST00000582617 74 ntBASIC2.26□□□□□ -2.05
PCDHGC3Q9UN70 Y_RNA.207-201ENST00000364142 106 ntBASIC2.25□□□□□ -2.05
PCDHGC3Q9UN70 RNU6-587P-201ENST00000391282 106 ntBASIC2.25□□□□□ -2.05
PCDHGC3Q9UN70 RNU6-687P-201ENST00000516443 89 ntBASIC2.25□□□□□ -2.05
PCDHGC3Q9UN70 RNU7-156P-201ENST00000517214 74 ntBASIC2.25□□□□□ -2.05
PCDHGC3Q9UN70 MIR1273D-201ENST00000577266 86 ntBASIC2.25□□□□□ -2.05
PCDHGC3Q9UN70 MIR6840-201ENST00000611937 71 ntBASIC2.25□□□□□ -2.05
PCDHGC3Q9UN70 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
PCDHGC3Q9UN70 MIR599-201ENST00000385069 95 ntBASIC2.24□□□□□ -2.05
PCDHGC3Q9UN70 SNORA3.2-201ENST00000408221 125 ntBASIC2.24□□□□□ -2.05
PCDHGC3Q9UN70 RPS26P5-201ENST00000418544 335 ntBASIC2.24□□□□□ -2.05
PCDHGC3Q9UN70 MIR4513-201ENST00000581077 86 ntBASIC2.24□□□□□ -2.05
PCDHGC3Q9UN70 MTRNR2L2-201ENST00000604882 87 ntBASIC2.24□□□□□ -2.05
PCDHGC3Q9UN70 AC106800.4-201ENST00000614905 153 ntBASIC2.24□□□□□ -2.05
PCDHGC3Q9UN70 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
PCDHGC3Q9UN70 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
PCDHGC3Q9UN70 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
PCDHGC3Q9UN70 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
PCDHGC3Q9UN70 SNORD90-201ENST00000391145 111 ntBASIC2.23□□□□□ -2.05
PCDHGC3Q9UN70 RNU1-78P-201ENST00000391248 165 ntBASIC2.23□□□□□ -2.05
PCDHGC3Q9UN70 AC008413.1-201ENST00000511864 177 ntBASIC2.23□□□□□ -2.05
PCDHGC3Q9UN70 RN7SKP88-201ENST00000516847 250 ntBASIC2.23□□□□□ -2.05
PCDHGC3Q9UN70 7SK.8-201ENST00000612110 250 ntBASIC2.23□□□□□ -2.05
PCDHGC3Q9UN70 7SK.11-201ENST00000615477 250 ntBASIC2.23□□□□□ -2.05
PCDHGC3Q9UN70 DLEU2_3.1-201ENST00000620005 73 ntBASIC2.23□□□□□ -2.05
PCDHGC3Q9UN70 7SK.13-201ENST00000622040 250 ntBASIC2.23□□□□□ -2.05
PCDHGC3Q9UN70 MIR6873-201ENST00000622788 63 ntBASIC2.23□□□□□ -2.05
PCDHGC3Q9UN70 Y_RNA.36-201ENST00000362602 112 ntBASIC2.22□□□□□ -2.05
PCDHGC3Q9UN70 SNORA8.1-201ENST00000384250 140 ntBASIC2.22□□□□□ -2.05
PCDHGC3Q9UN70 RNU6-364P-201ENST00000384387 107 ntBASIC2.22□□□□□ -2.05
PCDHGC3Q9UN70 RNA5SP425-201ENST00000410336 112 ntBASIC2.22□□□□□ -2.05
PCDHGC3Q9UN70 RN7SKP223-201ENST00000410582 62 ntBASIC2.22□□□□□ -2.05
PCDHGC3Q9UN70 AL591704.2-201ENST00000421658 181 ntBASIC2.22□□□□□ -2.05
PCDHGC3Q9UN70 AL606490.4-201ENST00000423117 127 ntBASIC2.22□□□□□ -2.05
PCDHGC3Q9UN70 AC048334.1-201ENST00000477975 159 ntBASIC2.22□□□□□ -2.05
PCDHGC3Q9UN70 MIR4422-201ENST00000581938 83 ntBASIC2.22□□□□□ -2.05
PCDHGC3Q9UN70 U6.100-201ENST00000636230 99 ntBASIC2.22□□□□□ -2.05
PCDHGC3Q9UN70 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
PCDHGC3Q9UN70 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
PCDHGC3Q9UN70 MIR942-201ENST00000401111 86 ntBASIC2.21□□□□□ -2.06
PCDHGC3Q9UN70 RNU6-935P-201ENST00000410371 100 ntBASIC2.21□□□□□ -2.06
PCDHGC3Q9UN70 snoU13.17-201ENST00000458802 104 ntBASIC2.21□□□□□ -2.06
PCDHGC3Q9UN70 AC125388.1-201ENST00000459631 156 ntBASIC2.21□□□□□ -2.06
PCDHGC3Q9UN70 MIR4435-1-201ENST00000582552 80 ntBASIC2.21□□□□□ -2.06
PCDHGC3Q9UN70 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
PCDHGC3Q9UN70 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.21□□□□□ -2.06
PCDHGC3Q9UN70 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
PCDHGC3Q9UN70 RNU6-340P-201ENST00000364005 107 ntBASIC2.2□□□□□ -2.06
PCDHGC3Q9UN70 RNA5SP37-201ENST00000365420 130 ntBASIC2.2□□□□□ -2.06
PCDHGC3Q9UN70 RNU6-535P-201ENST00000384722 107 ntBASIC2.2□□□□□ -2.06
PCDHGC3Q9UN70 MIR938-201ENST00000401216 83 ntBASIC2.2□□□□□ -2.06
PCDHGC3Q9UN70 RNA5SP508-201ENST00000411327 119 ntBASIC2.2□□□□□ -2.06
PCDHGC3Q9UN70 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.2□□□□□ -2.06
PCDHGC3Q9UN70 SNORA31.2-201ENST00000516019 134 ntBASIC2.2□□□□□ -2.06
PCDHGC3Q9UN70 AL645939.4-201ENST00000604495 135 ntBASIC2.2□□□□□ -2.06
PCDHGC3Q9UN70 MIR219B-201ENST00000637023 88 ntBASIC2.2□□□□□ -2.06
PCDHGC3Q9UN70 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
PCDHGC3Q9UN70 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.2□□□□□ -2.06
PCDHGC3Q9UN70 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.19□□□□□ -2.06
PCDHGC3Q9UN70 RNU6-649P-201ENST00000384463 107 ntBASIC2.19□□□□□ -2.06
PCDHGC3Q9UN70 SNORA64-201ENST00000384674 134 ntBASIC2.19□□□□□ -2.06
PCDHGC3Q9UN70 SNORA75.2-201ENST00000391138 150 ntBASIC2.19□□□□□ -2.06
PCDHGC3Q9UN70 SNORA75.3-201ENST00000391231 150 ntBASIC2.19□□□□□ -2.06
PCDHGC3Q9UN70 RNU2-59P-201ENST00000410482 191 ntBASIC2.19□□□□□ -2.06
PCDHGC3Q9UN70 Y_RNA.606-201ENST00000410579 103 ntBASIC2.19□□□□□ -2.06
PCDHGC3Q9UN70 AC025033.1-201ENST00000463883 194 ntBASIC2.19□□□□□ -2.06
PCDHGC3Q9UN70 AC079804.2-201ENST00000490376 200 ntBASIC2.19□□□□□ -2.06
PCDHGC3Q9UN70 RNU6-1057P-201ENST00000517162 102 ntBASIC2.19□□□□□ -2.06
PCDHGC3Q9UN70 MIR4676-201ENST00000583078 72 ntBASIC2.19□□□□□ -2.06
PCDHGC3Q9UN70 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
PCDHGC3Q9UN70 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
PCDHGC3Q9UN70 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms