Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 RNU6-1313P-201ENST00000362622 102 ntBASIC1.04□□□□□ -2.24
PIF1Q9H611 Y_RNA.119-201ENST00000363301 96 ntBASIC1.04□□□□□ -2.24
PIF1Q9H611 Y_RNA.338-201ENST00000365320 114 ntBASIC1.04□□□□□ -2.24
PIF1Q9H611 RNU6-106P-201ENST00000384405 107 ntBASIC1.04□□□□□ -2.24
PIF1Q9H611 SNORD38.2-201ENST00000384470 69 ntBASIC1.04□□□□□ -2.24
PIF1Q9H611 MIR577-201ENST00000385196 96 ntBASIC1.04□□□□□ -2.24
PIF1Q9H611 RNU6-554P-201ENST00000410466 106 ntBASIC1.04□□□□□ -2.24
PIF1Q9H611 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.04□□□□□ -2.24
PIF1Q9H611 RNU6-392P-201ENST00000364926 101 ntBASIC1.03□□□□□ -2.24
PIF1Q9H611 RNU6-1201P-201ENST00000384227 107 ntBASIC1.03□□□□□ -2.24
PIF1Q9H611 RPL39P28-201ENST00000465655 155 ntBASIC1.03□□□□□ -2.24
PIF1Q9H611 PSMC1P5-201ENST00000512850 177 ntBASIC1.03□□□□□ -2.24
PIF1Q9H611 AC141557.1-201ENST00000540982 400 ntBASIC1.03□□□□□ -2.24
PIF1Q9H611 MIR4694-201ENST00000578534 80 ntBASIC1.03□□□□□ -2.24
PIF1Q9H611 MIR4500-201ENST00000579472 76 ntBASIC1.03□□□□□ -2.24
PIF1Q9H611 MIR101-2-201ENST00000362195 79 ntBASIC1.02□□□□□ -2.25
PIF1Q9H611 RNY3P2-201ENST00000362918 102 ntBASIC1.02□□□□□ -2.25
PIF1Q9H611 Y_RNA.81-201ENST00000362997 102 ntBASIC1.02□□□□□ -2.25
PIF1Q9H611 RNU6-755P-201ENST00000364400 103 ntBASIC1.02□□□□□ -2.25
PIF1Q9H611 AC002350.1-201ENST00000490759 375 ntBASIC1.02□□□□□ -2.25
PIF1Q9H611 RNU6-531P-201ENST00000516694 104 ntBASIC1.02□□□□□ -2.25
PIF1Q9H611 AL442128.1-201ENST00000615151 90 ntBASIC1.02□□□□□ -2.25
PIF1Q9H611 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.02□□□□□ -2.25
PIF1Q9H611 RNU6-832P-201ENST00000363319 107 ntBASIC1.01□□□□□ -2.25
PIF1Q9H611 Y_RNA.327-201ENST00000365201 102 ntBASIC1.01□□□□□ -2.25
PIF1Q9H611 SNORA51.5-201ENST00000384126 131 ntBASIC1.01□□□□□ -2.25
PIF1Q9H611 AL031737.1-201ENST00000450125 223 ntBASIC1.01□□□□□ -2.25
PIF1Q9H611 RNU6-469P-201ENST00000516253 101 ntBASIC1.01□□□□□ -2.25
PIF1Q9H611 Y_RNA.697-201ENST00000516776 113 ntBASIC1.01□□□□□ -2.25
PIF1Q9H611 MIR3612-201ENST00000579753 87 ntBASIC1.01□□□□□ -2.25
PIF1Q9H611 AC008608.1-201ENST00000603910 127 ntBASIC1.01□□□□□ -2.25
PIF1Q9H611 SNORD114-21-201ENST00000606412 72 ntBASIC1.01□□□□□ -2.25
PIF1Q9H611 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
PIF1Q9H611 MIR450A1-201ENST00000362262 91 ntBASIC1□□□□□ -2.25
PIF1Q9H611 RNY1P10-201ENST00000363268 113 ntBASIC1□□□□□ -2.25
PIF1Q9H611 RNU6-1099P-201ENST00000363533 107 ntBASIC1□□□□□ -2.25
PIF1Q9H611 RNU4-36P-201ENST00000364294 144 ntBASIC1□□□□□ -2.25
PIF1Q9H611 Y_RNA.247-201ENST00000364500 92 ntBASIC1□□□□□ -2.25
PIF1Q9H611 RNU6-756P-201ENST00000383997 107 ntBASIC1□□□□□ -2.25
PIF1Q9H611 SNORA19.1-201ENST00000410656 129 ntBASIC1□□□□□ -2.25
PIF1Q9H611 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.99□□□□□ -2.25
PIF1Q9H611 Y_RNA.536-201ENST00000384621 113 ntBASIC0.99□□□□□ -2.25
PIF1Q9H611 RNU6-1006P-201ENST00000516998 103 ntBASIC0.99□□□□□ -2.25
PIF1Q9H611 MTND5P40-201ENST00000559945 246 ntBASIC0.99□□□□□ -2.25
PIF1Q9H611 AC013244.2-201ENST00000603396 103 ntBASIC0.99□□□□□ -2.25
PIF1Q9H611 AC096720.1-201ENST00000604441 183 ntBASIC0.99□□□□□ -2.25
PIF1Q9H611 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
PIF1Q9H611 HSBP1P2-201ENST00000299671 229 ntBASIC0.98□□□□□ -2.25
PIF1Q9H611 MIR337-201ENST00000362281 93 ntBASIC0.98□□□□□ -2.25
PIF1Q9H611 SNORD38.1-201ENST00000363863 68 ntBASIC0.98□□□□□ -2.25
PIF1Q9H611 Y_RNA.377-201ENST00000365644 108 ntBASIC0.98□□□□□ -2.25
PIF1Q9H611 RNU6-1113P-201ENST00000384348 107 ntBASIC0.98□□□□□ -2.25
PIF1Q9H611 RNA5SP222-201ENST00000411039 105 ntBASIC0.98□□□□□ -2.25
PIF1Q9H611 SPINT5P-201ENST00000448174 155 ntBASIC0.98□□□□□ -2.25
PIF1Q9H611 Y_RNA.659-201ENST00000515994 113 ntBASIC0.98□□□□□ -2.25
PIF1Q9H611 MIR548H5-201ENST00000580314 60 ntBASIC0.98□□□□□ -2.25
PIF1Q9H611 MIR4295-201ENST00000585286 85 ntBASIC0.98□□□□□ -2.25
PIF1Q9H611 Y_RNA.56-201ENST00000362798 112 ntBASIC0.97□□□□□ -2.25
PIF1Q9H611 Y_RNA.78-201ENST00000362970 110 ntBASIC0.97□□□□□ -2.25
PIF1Q9H611 RNU6-321P-201ENST00000410912 106 ntBASIC0.97□□□□□ -2.25
PIF1Q9H611 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.97□□□□□ -2.25
PIF1Q9H611 BX276092.1-201ENST00000427368 251 ntBASIC0.97□□□□□ -2.25
PIF1Q9H611 AC087343.1-201ENST00000477341 475 ntBASIC0.97□□□□□ -2.25
PIF1Q9H611 RNU6-1053P-201ENST00000515930 101 ntBASIC0.97□□□□□ -2.25
PIF1Q9H611 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.97□□□□□ -2.25
PIF1Q9H611 MIR3613-201ENST00000579844 87 ntBASIC0.97□□□□□ -2.25
PIF1Q9H611 uc_338.16-201ENST00000621804 95 ntBASIC0.97□□□□□ -2.25
PIF1Q9H611 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
PIF1Q9H611 RNU6-766P-201ENST00000362478 107 ntBASIC0.96□□□□□ -2.26
PIF1Q9H611 MIR590-201ENST00000385008 97 ntBASIC0.96□□□□□ -2.26
PIF1Q9H611 TRMT112P2-201ENST00000512910 132 ntBASIC0.96□□□□□ -2.26
PIF1Q9H611 RNU6-904P-201ENST00000516206 101 ntBASIC0.96□□□□□ -2.26
PIF1Q9H611 RNU6-90P-201ENST00000606352 106 ntBASIC0.96□□□□□ -2.26
PIF1Q9H611 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.96□□□□□ -2.26
PIF1Q9H611 MIR18A-201ENST00000362310 71 ntBASIC0.95□□□□□ -2.26
PIF1Q9H611 Y_RNA.10-201ENST00000362371 110 ntBASIC0.95□□□□□ -2.26
PIF1Q9H611 RNU6-147P-201ENST00000383983 107 ntBASIC0.95□□□□□ -2.26
PIF1Q9H611 RNU6-535P-201ENST00000384722 107 ntBASIC0.95□□□□□ -2.26
PIF1Q9H611 MIR548G-201ENST00000408442 89 ntBASIC0.95□□□□□ -2.26
PIF1Q9H611 Y_RNA.601-201ENST00000410500 113 ntBASIC0.95□□□□□ -2.26
PIF1Q9H611 RNU6-153P-201ENST00000364422 104 ntBASIC0.94□□□□□ -2.26
PIF1Q9H611 SCARNA23-201ENST00000516060 130 ntBASIC0.94□□□□□ -2.26
PIF1Q9H611 SNORD45B-201ENST00000364617 72 ntBASIC0.93□□□□□ -2.26
PIF1Q9H611 RNU6-109P-201ENST00000516364 107 ntBASIC0.93□□□□□ -2.26
PIF1Q9H611 RNU6-184P-201ENST00000516514 107 ntBASIC0.93□□□□□ -2.26
PIF1Q9H611 AL590095.2-201ENST00000604136 117 ntBASIC0.93□□□□□ -2.26
PIF1Q9H611 AC103810.9-201ENST00000606688 112 ntBASIC0.93□□□□□ -2.26
PIF1Q9H611 AC091304.10-201ENST00000641554 121 ntBASIC0.93□□□□□ -2.26
PIF1Q9H611 RNU6-291P-201ENST00000384720 107 ntBASIC0.92□□□□□ -2.26
PIF1Q9H611 MIR140-201ENST00000385282 100 ntBASIC0.92□□□□□ -2.26
PIF1Q9H611 SNRPGP12-201ENST00000449481 213 ntBASIC0.92□□□□□ -2.26
PIF1Q9H611 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.92□□□□□ -2.26
PIF1Q9H611 RNU6-795P-201ENST00000516323 103 ntBASIC0.92□□□□□ -2.26
PIF1Q9H611 AC138907.6-201ENST00000568401 126 ntBASIC0.92□□□□□ -2.26
PIF1Q9H611 AC138869.1-201ENST00000568623 124 ntBASIC0.92□□□□□ -2.26
PIF1Q9H611 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.92□□□□□ -2.26
PIF1Q9H611 RNU4-38P-201ENST00000364472 129 ntBASIC0.91□□□□□ -2.26
PIF1Q9H611 SNORA36.2-201ENST00000384004 127 ntBASIC0.91□□□□□ -2.26
PIF1Q9H611 RNU6-571P-201ENST00000384128 107 ntBASIC0.91□□□□□ -2.26
PIF1Q9H611 Y_RNA.567-201ENST00000384736 106 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 170.8 ms