Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 AL645939.4-201ENST00000604495 135 ntBASIC1.68□□□□□ -2.14
RNF38Q9H0F5 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.68□□□□□ -2.14
RNF38Q9H0F5 MIR378A-201ENST00000362177 66 ntBASIC1.67□□□□□ -2.14
RNF38Q9H0F5 MT-TF-201ENST00000387314 71 ntBASIC1.67□□□□□ -2.14
RNF38Q9H0F5 RNU6-279P-201ENST00000391297 101 ntBASIC1.67□□□□□ -2.14
RNF38Q9H0F5 SNORD93-201ENST00000408813 74 ntBASIC1.67□□□□□ -2.14
RNF38Q9H0F5 Y_RNA.607-201ENST00000410597 98 ntBASIC1.67□□□□□ -2.14
RNF38Q9H0F5 AP1B1P2-201ENST00000416196 106 ntBASIC1.67□□□□□ -2.14
RNF38Q9H0F5 snoU13.21-201ENST00000459368 105 ntBASIC1.67□□□□□ -2.14
RNF38Q9H0F5 RNU6-531P-201ENST00000516694 104 ntBASIC1.67□□□□□ -2.14
RNF38Q9H0F5 SNORA25.16-201ENST00000516741 121 ntBASIC1.67□□□□□ -2.14
RNF38Q9H0F5 RN7SKP88-201ENST00000516847 250 ntBASIC1.67□□□□□ -2.14
RNF38Q9H0F5 7SK.8-201ENST00000612110 250 ntBASIC1.67□□□□□ -2.14
RNF38Q9H0F5 7SK.11-201ENST00000615477 250 ntBASIC1.67□□□□□ -2.14
RNF38Q9H0F5 7SK.13-201ENST00000622040 250 ntBASIC1.67□□□□□ -2.14
RNF38Q9H0F5 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.67□□□□□ -2.14
RNF38Q9H0F5 Y_RNA.221-201ENST00000364248 96 ntBASIC1.66□□□□□ -2.14
RNF38Q9H0F5 Y_RNA.338-201ENST00000365320 114 ntBASIC1.66□□□□□ -2.14
RNF38Q9H0F5 RNU7-153P-201ENST00000516455 62 ntBASIC1.66□□□□□ -2.14
RNF38Q9H0F5 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.66□□□□□ -2.14
RNF38Q9H0F5 MIR4498-201ENST00000577599 66 ntBASIC1.66□□□□□ -2.14
RNF38Q9H0F5 RNU6-403P-201ENST00000363163 104 ntBASIC1.65□□□□□ -2.15
RNF38Q9H0F5 RNU1-42P-201ENST00000364033 160 ntBASIC1.65□□□□□ -2.15
RNF38Q9H0F5 Y_RNA.316-201ENST00000365118 111 ntBASIC1.65□□□□□ -2.15
RNF38Q9H0F5 Y_RNA.330-201ENST00000365230 109 ntBASIC1.65□□□□□ -2.15
RNF38Q9H0F5 RNU6-571P-201ENST00000384128 107 ntBASIC1.65□□□□□ -2.15
RNF38Q9H0F5 RNU6-997P-201ENST00000384725 107 ntBASIC1.65□□□□□ -2.15
RNF38Q9H0F5 AC015818.7-201ENST00000428754 109 ntBASIC1.65□□□□□ -2.15
RNF38Q9H0F5 RNU6-165P-201ENST00000517170 99 ntBASIC1.65□□□□□ -2.15
RNF38Q9H0F5 MIR4491-201ENST00000581087 68 ntBASIC1.65□□□□□ -2.15
RNF38Q9H0F5 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.65□□□□□ -2.15
RNF38Q9H0F5 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
RNF38Q9H0F5 MIR377-201ENST00000362145 69 ntBASIC1.64□□□□□ -2.15
RNF38Q9H0F5 SNORD115-37-201ENST00000363768 82 ntBASIC1.64□□□□□ -2.15
RNF38Q9H0F5 MIR516A2-201ENST00000384888 90 ntBASIC1.64□□□□□ -2.15
RNF38Q9H0F5 MIR516A1-201ENST00000385033 90 ntBASIC1.64□□□□□ -2.15
RNF38Q9H0F5 RNU7-85P-201ENST00000458851 63 ntBASIC1.64□□□□□ -2.15
RNF38Q9H0F5 snoU13.11-201ENST00000459219 104 ntBASIC1.64□□□□□ -2.15
RNF38Q9H0F5 AC093729.1-201ENST00000513074 128 ntBASIC1.64□□□□□ -2.15
RNF38Q9H0F5 RNU11-2P-201ENST00000516898 142 ntBASIC1.64□□□□□ -2.15
RNF38Q9H0F5 AC023934.1-201ENST00000574529 2389 ntBASIC1.63□□□□□ -2.15
RNF38Q9H0F5 Y_RNA.588-201ENST00000391254 102 ntBASIC1.63□□□□□ -2.15
RNF38Q9H0F5 SNORD83.1-201ENST00000411362 77 ntBASIC1.63□□□□□ -2.15
RNF38Q9H0F5 SNORD4B-201ENST00000459083 72 ntBASIC1.63□□□□□ -2.15
RNF38Q9H0F5 SNORD53B-201ENST00000577887 78 ntBASIC1.63□□□□□ -2.15
RNF38Q9H0F5 RNU1-36P-201ENST00000365130 165 ntBASIC1.62□□□□□ -2.15
RNF38Q9H0F5 RNU6-53P-201ENST00000365367 106 ntBASIC1.62□□□□□ -2.15
RNF38Q9H0F5 MIR1323-201ENST00000408090 73 ntBASIC1.62□□□□□ -2.15
RNF38Q9H0F5 RNU7-95P-201ENST00000459222 64 ntBASIC1.62□□□□□ -2.15
RNF38Q9H0F5 AC048334.1-201ENST00000477975 159 ntBASIC1.62□□□□□ -2.15
RNF38Q9H0F5 snoU13.31-201ENST00000607291 104 ntBASIC1.62□□□□□ -2.15
RNF38Q9H0F5 AC008163.1-202ENST00000636004 2889 ntBASIC1.61□□□□□ -2.15
RNF38Q9H0F5 RNU4-58P-201ENST00000363192 141 ntBASIC1.61□□□□□ -2.15
RNF38Q9H0F5 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.61□□□□□ -2.15
RNF38Q9H0F5 AL512598.1-201ENST00000610158 273 ntBASIC1.61□□□□□ -2.15
RNF38Q9H0F5 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.61□□□□□ -2.15
RNF38Q9H0F5 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.61□□□□□ -2.15
RNF38Q9H0F5 RNU6-580P-201ENST00000365159 107 ntBASIC1.6□□□□□ -2.15
RNF38Q9H0F5 RNU6-24P-201ENST00000384440 107 ntBASIC1.6□□□□□ -2.15
RNF38Q9H0F5 MIR18B-201ENST00000454574 71 ntBASIC1.6□□□□□ -2.15
RNF38Q9H0F5 Y_RNA.648-201ENST00000459455 110 ntBASIC1.6□□□□□ -2.15
RNF38Q9H0F5 BX248123.2-201ENST00000606318 124 ntBASIC1.6□□□□□ -2.15
RNF38Q9H0F5 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
RNF38Q9H0F5 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
RNF38Q9H0F5 RNU6-243P-201ENST00000391140 107 ntBASIC1.59□□□□□ -2.15
RNF38Q9H0F5 MIR889-201ENST00000401280 79 ntBASIC1.59□□□□□ -2.15
RNF38Q9H0F5 MIR1236-201ENST00000408340 102 ntBASIC1.59□□□□□ -2.15
RNF38Q9H0F5 MIR1257-201ENST00000408490 117 ntBASIC1.59□□□□□ -2.15
RNF38Q9H0F5 RNU7-185P-201ENST00000459215 60 ntBASIC1.59□□□□□ -2.15
RNF38Q9H0F5 RNU7-106P-201ENST00000459514 67 ntBASIC1.59□□□□□ -2.15
RNF38Q9H0F5 Y_RNA.676-201ENST00000516393 96 ntBASIC1.59□□□□□ -2.15
RNF38Q9H0F5 AC013244.2-201ENST00000603396 103 ntBASIC1.59□□□□□ -2.15
RNF38Q9H0F5 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.16
RNF38Q9H0F5 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
RNF38Q9H0F5 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.58□□□□□ -2.16
RNF38Q9H0F5 Y_RNA.13-201ENST00000362403 112 ntBASIC1.58□□□□□ -2.16
RNF38Q9H0F5 SNORD36A-201ENST00000362874 73 ntBASIC1.58□□□□□ -2.16
RNF38Q9H0F5 Y_RNA.94-201ENST00000363068 106 ntBASIC1.58□□□□□ -2.16
RNF38Q9H0F5 MIR517C-201ENST00000385103 95 ntBASIC1.58□□□□□ -2.16
RNF38Q9H0F5 SNORA67.6-201ENST00000391093 99 ntBASIC1.58□□□□□ -2.16
RNF38Q9H0F5 RNU6-1254P-201ENST00000391266 104 ntBASIC1.58□□□□□ -2.16
RNF38Q9H0F5 SNORD63B-201ENST00000411005 70 ntBASIC1.58□□□□□ -2.16
RNF38Q9H0F5 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.58□□□□□ -2.16
RNF38Q9H0F5 RNU6-1053P-201ENST00000515930 101 ntBASIC1.58□□□□□ -2.16
RNF38Q9H0F5 AC140658.3-201ENST00000567603 271 ntBASIC1.58□□□□□ -2.16
RNF38Q9H0F5 MIR4712-201ENST00000583750 82 ntBASIC1.58□□□□□ -2.16
RNF38Q9H0F5 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.58□□□□□ -2.16
RNF38Q9H0F5 MIR101-2-201ENST00000362195 79 ntBASIC1.57□□□□□ -2.16
RNF38Q9H0F5 Y_RNA.508-201ENST00000384502 114 ntBASIC1.57□□□□□ -2.16
RNF38Q9H0F5 SNORA75.2-201ENST00000391138 150 ntBASIC1.57□□□□□ -2.16
RNF38Q9H0F5 SNORA75.3-201ENST00000391231 150 ntBASIC1.57□□□□□ -2.16
RNF38Q9H0F5 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.57□□□□□ -2.16
RNF38Q9H0F5 RNU6-1054P-201ENST00000411293 104 ntBASIC1.57□□□□□ -2.16
RNF38Q9H0F5 SNORA31.2-201ENST00000516019 134 ntBASIC1.57□□□□□ -2.16
RNF38Q9H0F5 SNORA25.13-201ENST00000516395 103 ntBASIC1.57□□□□□ -2.16
RNF38Q9H0F5 AC023827.1-201ENST00000569247 97 ntBASIC1.57□□□□□ -2.16
RNF38Q9H0F5 MIR4771-2-201ENST00000577758 74 ntBASIC1.57□□□□□ -2.16
RNF38Q9H0F5 MIR4771-1-201ENST00000582617 74 ntBASIC1.57□□□□□ -2.16
RNF38Q9H0F5 MIR4536-1-201ENST00000583537 88 ntBASIC1.57□□□□□ -2.16
RNF38Q9H0F5 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 200.8 ms