Protein–RNA interactions for Protein: Q96PN7

TRERF1, Transcriptional-regulating factor 1, humanhuman

Predictions only

Length 1,200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1Q96PN7 RNU6-1051P-201ENST00000365471 102 ntBASIC2.34□□□□□ -2.03
TRERF1Q96PN7 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
TRERF1Q96PN7 MIR942-201ENST00000401111 86 ntBASIC2.34□□□□□ -2.03
TRERF1Q96PN7 AL161935.2-201ENST00000414627 60 ntBASIC2.34□□□□□ -2.03
TRERF1Q96PN7 RNU7-195P-201ENST00000458793 62 ntBASIC2.34□□□□□ -2.03
TRERF1Q96PN7 RPL23AP42-201ENST00000471152 471 ntBASIC2.34□□□□□ -2.03
TRERF1Q96PN7 TRAJ51-201ENST00000504127 63 ntBASIC2.34□□□□□ -2.03
TRERF1Q96PN7 MIR5002-201ENST00000584713 97 ntBASIC2.34□□□□□ -2.03
TRERF1Q96PN7 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.34□□□□□ -2.04
TRERF1Q96PN7 Y_RNA.207-201ENST00000364142 106 ntBASIC2.33□□□□□ -2.04
TRERF1Q96PN7 RNA5SP160-201ENST00000364866 120 ntBASIC2.33□□□□□ -2.04
TRERF1Q96PN7 Y_RNA.371-201ENST00000365591 113 ntBASIC2.33□□□□□ -2.04
TRERF1Q96PN7 RNU6-471P-201ENST00000383944 106 ntBASIC2.33□□□□□ -2.04
TRERF1Q96PN7 MIR9-2-201ENST00000384838 87 ntBASIC2.33□□□□□ -2.04
TRERF1Q96PN7 MIR513A1-201ENST00000385138 129 ntBASIC2.33□□□□□ -2.04
TRERF1Q96PN7 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
TRERF1Q96PN7 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.33□□□□□ -2.04
TRERF1Q96PN7 RNU11-2P-201ENST00000516898 142 ntBASIC2.33□□□□□ -2.04
TRERF1Q96PN7 MIR3140-201ENST00000583685 90 ntBASIC2.33□□□□□ -2.04
TRERF1Q96PN7 AC005520.4-201ENST00000604337 90 ntBASIC2.33□□□□□ -2.04
TRERF1Q96PN7 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
TRERF1Q96PN7 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.33□□□□□ -2.04
TRERF1Q96PN7 ZNF355P-201ENST00000427301 3216 ntBASIC2.32□□□□□ -2.04
TRERF1Q96PN7 RNU6-291P-201ENST00000384720 107 ntBASIC2.32□□□□□ -2.04
TRERF1Q96PN7 SNORD100-201ENST00000408573 76 ntBASIC2.32□□□□□ -2.04
TRERF1Q96PN7 RNA5SP95-201ENST00000410319 137 ntBASIC2.32□□□□□ -2.04
TRERF1Q96PN7 RNU6-295P-201ENST00000516901 104 ntBASIC2.32□□□□□ -2.04
TRERF1Q96PN7 MIR6516-201ENST00000630554 81 ntBASIC2.32□□□□□ -2.04
TRERF1Q96PN7 VPS35-212ENST00000640313 141 ntTSL 5 BASIC2.32□□□□□ -2.04
TRERF1Q96PN7 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
TRERF1Q96PN7 MIR337-201ENST00000362281 93 ntBASIC2.31□□□□□ -2.04
TRERF1Q96PN7 Y_RNA.42-201ENST00000362660 108 ntBASIC2.31□□□□□ -2.04
TRERF1Q96PN7 RNU4-58P-201ENST00000363192 141 ntBASIC2.31□□□□□ -2.04
TRERF1Q96PN7 RNU6-340P-201ENST00000364005 107 ntBASIC2.31□□□□□ -2.04
TRERF1Q96PN7 RNA5SP37-201ENST00000365420 130 ntBASIC2.31□□□□□ -2.04
TRERF1Q96PN7 MT-TF-201ENST00000387314 71 ntBASIC2.31□□□□□ -2.04
TRERF1Q96PN7 RNU6-654P-201ENST00000364373 107 ntBASIC2.3□□□□□ -2.04
TRERF1Q96PN7 RPL30P7-201ENST00000479312 323 ntBASIC2.3□□□□□ -2.04
TRERF1Q96PN7 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.3□□□□□ -2.04
TRERF1Q96PN7 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.3□□□□□ -2.04
TRERF1Q96PN7 MIR4287-201ENST00000579398 78 ntBASIC2.3□□□□□ -2.04
TRERF1Q96PN7 TRDV1-202ENST00000621643 102 ntBASIC2.3□□□□□ -2.04
TRERF1Q96PN7 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
TRERF1Q96PN7 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
TRERF1Q96PN7 RNA5SP99-201ENST00000364020 114 ntBASIC2.29□□□□□ -2.04
TRERF1Q96PN7 Y_RNA.536-201ENST00000384621 113 ntBASIC2.29□□□□□ -2.04
TRERF1Q96PN7 SNORD93-201ENST00000408813 74 ntBASIC2.29□□□□□ -2.04
TRERF1Q96PN7 HMGN2P23-201ENST00000456759 269 ntBASIC2.29□□□□□ -2.04
TRERF1Q96PN7 RN7SL274P-201ENST00000492268 272 ntBASIC2.29□□□□□ -2.04
TRERF1Q96PN7 MIR2115-201ENST00000516657 100 ntBASIC2.29□□□□□ -2.04
TRERF1Q96PN7 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2.29□□□□□ -2.04
TRERF1Q96PN7 U6.100-201ENST00000636230 99 ntBASIC2.29□□□□□ -2.04
TRERF1Q96PN7 RNU6-403P-201ENST00000363163 104 ntBASIC2.28□□□□□ -2.04
TRERF1Q96PN7 MT-TN-201ENST00000387400 73 ntBASIC2.28□□□□□ -2.04
TRERF1Q96PN7 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.28□□□□□ -2.04
TRERF1Q96PN7 MIR1185-1-201ENST00000408598 86 ntBASIC2.28□□□□□ -2.04
TRERF1Q96PN7 RNU6-548P-201ENST00000517083 115 ntBASIC2.28□□□□□ -2.04
TRERF1Q96PN7 MIR5089-201ENST00000580047 84 ntBASIC2.28□□□□□ -2.04
TRERF1Q96PN7 AC013244.2-201ENST00000603396 103 ntBASIC2.28□□□□□ -2.04
TRERF1Q96PN7 MIR6845-201ENST00000613182 61 ntBASIC2.28□□□□□ -2.04
TRERF1Q96PN7 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
TRERF1Q96PN7 RNU1-36P-201ENST00000365130 165 ntBASIC2.27□□□□□ -2.05
TRERF1Q96PN7 SNORD45A-201ENST00000384512 84 ntBASIC2.27□□□□□ -2.05
TRERF1Q96PN7 MIR583-201ENST00000384846 75 ntBASIC2.27□□□□□ -2.05
TRERF1Q96PN7 RNU6-482P-201ENST00000391068 107 ntBASIC2.27□□□□□ -2.05
TRERF1Q96PN7 SNORA26.9-201ENST00000391322 122 ntBASIC2.27□□□□□ -2.05
TRERF1Q96PN7 RNU1-40P-201ENST00000516816 164 ntBASIC2.27□□□□□ -2.05
TRERF1Q96PN7 RNU1-97P-201ENST00000516872 164 ntBASIC2.27□□□□□ -2.05
TRERF1Q96PN7 AP003716.2-201ENST00000528260 108 ntBASIC2.27□□□□□ -2.05
TRERF1Q96PN7 MIR4696-201ENST00000581431 70 ntBASIC2.27□□□□□ -2.05
TRERF1Q96PN7 SNRPGP19-201ENST00000603826 189 ntBASIC2.27□□□□□ -2.05
TRERF1Q96PN7 AL627230.6-201ENST00000611129 280 ntBASIC2.27□□□□□ -2.05
TRERF1Q96PN7 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.27□□□□□ -2.05
TRERF1Q96PN7 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
TRERF1Q96PN7 RNU6-53P-201ENST00000365367 106 ntBASIC2.26□□□□□ -2.05
TRERF1Q96PN7 RNU6-499P-201ENST00000365615 107 ntBASIC2.26□□□□□ -2.05
TRERF1Q96PN7 RNA5SP182-201ENST00000516064 82 ntBASIC2.26□□□□□ -2.05
TRERF1Q96PN7 RNU6-947P-201ENST00000516264 106 ntBASIC2.26□□□□□ -2.05
TRERF1Q96PN7 AL353997.5-201ENST00000618886 171 ntBASIC2.26□□□□□ -2.05
TRERF1Q96PN7 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.26□□□□□ -2.05
TRERF1Q96PN7 Y_RNA.239-201ENST00000364444 113 ntBASIC2.25□□□□□ -2.05
TRERF1Q96PN7 RNU6-630P-201ENST00000391258 106 ntBASIC2.25□□□□□ -2.05
TRERF1Q96PN7 AC092628.1-201ENST00000436250 252 ntBASIC2.25□□□□□ -2.05
TRERF1Q96PN7 Y_RNA.809-201ENST00000516058 95 ntBASIC2.25□□□□□ -2.05
TRERF1Q96PN7 MIR4299-201ENST00000577899 72 ntBASIC2.25□□□□□ -2.05
TRERF1Q96PN7 AL773524.1-201ENST00000614065 229 ntBASIC2.25□□□□□ -2.05
TRERF1Q96PN7 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
TRERF1Q96PN7 RNU6-664P-201ENST00000362381 107 ntBASIC2.24□□□□□ -2.05
TRERF1Q96PN7 RNU6-1054P-201ENST00000411293 104 ntBASIC2.24□□□□□ -2.05
TRERF1Q96PN7 AL356379.1-201ENST00000414105 126 ntBASIC2.24□□□□□ -2.05
TRERF1Q96PN7 AC244636.1-201ENST00000421152 228 ntBASIC2.24□□□□□ -2.05
TRERF1Q96PN7 AC093423.1-201ENST00000440817 142 ntBASIC2.24□□□□□ -2.05
TRERF1Q96PN7 JTBP1-201ENST00000441314 247 ntBASIC2.24□□□□□ -2.05
TRERF1Q96PN7 snoU13.21-201ENST00000459368 105 ntBASIC2.24□□□□□ -2.05
TRERF1Q96PN7 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC2.24□□□□□ -2.05
TRERF1Q96PN7 5S_rRNA.15-201ENST00000611169 127 ntBASIC2.24□□□□□ -2.05
TRERF1Q96PN7 DLEU2_3.1-201ENST00000620005 73 ntBASIC2.24□□□□□ -2.05
TRERF1Q96PN7 RNU6-824P-201ENST00000363724 104 ntBASIC2.23□□□□□ -2.05
TRERF1Q96PN7 SNORD101-201ENST00000384027 73 ntBASIC2.23□□□□□ -2.05
TRERF1Q96PN7 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms