Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 Y_RNA.56-201ENST00000362798 112 ntBASIC2.73□□□□□ -1.97
LRCH3Q96II8 RNU6-1187P-201ENST00000364771 110 ntBASIC2.73□□□□□ -1.97
LRCH3Q96II8 RNA5SP95-201ENST00000410319 137 ntBASIC2.73□□□□□ -1.97
LRCH3Q96II8 AL161935.2-201ENST00000414627 60 ntBASIC2.73□□□□□ -1.97
LRCH3Q96II8 MIR4658-201ENST00000584344 65 ntBASIC2.73□□□□□ -1.97
LRCH3Q96II8 RNU6-654P-201ENST00000364373 107 ntBASIC2.72□□□□□ -1.97
LRCH3Q96II8 AC108667.1-201ENST00000428618 249 ntBASIC2.72□□□□□ -1.97
LRCH3Q96II8 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.72□□□□□ -1.97
LRCH3Q96II8 Y_RNA.697-201ENST00000516776 113 ntBASIC2.72□□□□□ -1.97
LRCH3Q96II8 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
LRCH3Q96II8 RNU6-829P-201ENST00000363700 112 ntBASIC2.71□□□□□ -1.98
LRCH3Q96II8 AC097635.1-201ENST00000450678 155 ntBASIC2.71□□□□□ -1.98
LRCH3Q96II8 MIR18B-201ENST00000454574 71 ntBASIC2.71□□□□□ -1.98
LRCH3Q96II8 RNU6-295P-201ENST00000516901 104 ntBASIC2.71□□□□□ -1.98
LRCH3Q96II8 snoU13.31-201ENST00000607291 104 ntBASIC2.71□□□□□ -1.98
LRCH3Q96II8 MIR6873-201ENST00000622788 63 ntBASIC2.71□□□□□ -1.98
LRCH3Q96II8 MIR4773-1-201ENST00000637203 78 ntBASIC2.71□□□□□ -1.98
LRCH3Q96II8 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
LRCH3Q96II8 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
LRCH3Q96II8 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
LRCH3Q96II8 RNU6-321P-201ENST00000410912 106 ntBASIC2.7□□□□□ -1.98
LRCH3Q96II8 RNA5SP450-201ENST00000411206 102 ntBASIC2.7□□□□□ -1.98
LRCH3Q96II8 AP003716.2-201ENST00000528260 108 ntBASIC2.7□□□□□ -1.98
LRCH3Q96II8 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.7□□□□□ -1.98
LRCH3Q96II8 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.7□□□□□ -1.98
LRCH3Q96II8 5S_rRNA.15-201ENST00000611169 127 ntBASIC2.7□□□□□ -1.98
LRCH3Q96II8 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
LRCH3Q96II8 Y_RNA.13-201ENST00000362403 112 ntBASIC2.69□□□□□ -1.98
LRCH3Q96II8 Y_RNA.236-201ENST00000364427 111 ntBASIC2.69□□□□□ -1.98
LRCH3Q96II8 Y_RNA.258-201ENST00000364613 105 ntBASIC2.69□□□□□ -1.98
LRCH3Q96II8 RNU6-1177P-201ENST00000391058 104 ntBASIC2.69□□□□□ -1.98
LRCH3Q96II8 MIR1185-1-201ENST00000408598 86 ntBASIC2.69□□□□□ -1.98
LRCH3Q96II8 RNU6-274P-201ENST00000459566 107 ntBASIC2.69□□□□□ -1.98
LRCH3Q96II8 MIR3605-201ENST00000583214 100 ntBASIC2.69□□□□□ -1.98
LRCH3Q96II8 MIR4635-201ENST00000583759 79 ntBASIC2.69□□□□□ -1.98
LRCH3Q96II8 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.69□□□□□ -1.98
LRCH3Q96II8 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
LRCH3Q96II8 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
LRCH3Q96II8 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
LRCH3Q96II8 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
LRCH3Q96II8 RNU6-580P-201ENST00000365159 107 ntBASIC2.68□□□□□ -1.98
LRCH3Q96II8 RNU6-382P-201ENST00000365181 106 ntBASIC2.68□□□□□ -1.98
LRCH3Q96II8 RNU6ATAC33P-201ENST00000408647 126 ntBASIC2.68□□□□□ -1.98
LRCH3Q96II8 RNA5SP270-201ENST00000411361 118 ntBASIC2.68□□□□□ -1.98
LRCH3Q96II8 RNU6-982P-201ENST00000516216 102 ntBASIC2.68□□□□□ -1.98
LRCH3Q96II8 MIR6082-201ENST00000613604 109 ntBASIC2.68□□□□□ -1.98
LRCH3Q96II8 AC023934.1-201ENST00000574529 2389 ntBASIC2.68□□□□□ -1.98
LRCH3Q96II8 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
LRCH3Q96II8 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
LRCH3Q96II8 MIR26A1-201ENST00000362205 77 ntBASIC2.67□□□□□ -1.98
LRCH3Q96II8 AL359511.1-201ENST00000402970 211 ntBASIC2.67□□□□□ -1.98
LRCH3Q96II8 RNU6-1265P-201ENST00000516342 103 ntBASIC2.67□□□□□ -1.98
LRCH3Q96II8 RNU6-752P-201ENST00000516376 102 ntBASIC2.67□□□□□ -1.98
LRCH3Q96II8 SNRPGP19-201ENST00000603826 189 ntBASIC2.67□□□□□ -1.98
LRCH3Q96II8 MIR599-201ENST00000385069 95 ntBASIC2.66□□□□□ -1.98
LRCH3Q96II8 SNORA26.9-201ENST00000391322 122 ntBASIC2.66□□□□□ -1.98
LRCH3Q96II8 AC244098.3-201ENST00000424803 96 ntBASIC2.66□□□□□ -1.98
LRCH3Q96II8 RNU6-947P-201ENST00000516264 106 ntBASIC2.66□□□□□ -1.98
LRCH3Q96II8 MIR514B-201ENST00000516774 80 ntBASIC2.66□□□□□ -1.98
LRCH3Q96II8 RNU6-250P-201ENST00000516958 103 ntBASIC2.66□□□□□ -1.98
LRCH3Q96II8 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
LRCH3Q96II8 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.65□□□□□ -1.98
LRCH3Q96II8 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.65□□□□□ -1.98
LRCH3Q96II8 RNA5SP492-201ENST00000411330 114 ntBASIC2.65□□□□□ -1.99
LRCH3Q96II8 RNU7-185P-201ENST00000459215 60 ntBASIC2.65□□□□□ -1.99
LRCH3Q96II8 GHRLOS.1-201ENST00000610995 70 ntBASIC2.65□□□□□ -1.99
LRCH3Q96II8 MIR103A2-201ENST00000362154 78 ntBASIC2.64□□□□□ -1.99
LRCH3Q96II8 SNORA17.3-201ENST00000391159 129 ntBASIC2.64□□□□□ -1.99
LRCH3Q96II8 AL691482.2-201ENST00000457453 84 ntBASIC2.64□□□□□ -1.99
LRCH3Q96II8 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.64□□□□□ -1.99
LRCH3Q96II8 Y_RNA.540-201ENST00000384638 111 ntBASIC2.63□□□□□ -1.99
LRCH3Q96II8 JTBP1-201ENST00000441314 247 ntBASIC2.63□□□□□ -1.99
LRCH3Q96II8 snoU13.21-201ENST00000459368 105 ntBASIC2.63□□□□□ -1.99
LRCH3Q96II8 RNU6-1079P-201ENST00000362861 110 ntBASIC2.62□□□□□ -1.99
LRCH3Q96II8 SNORA67.3-201ENST00000384366 140 ntBASIC2.62□□□□□ -1.99
LRCH3Q96II8 MIR1257-201ENST00000408490 117 ntBASIC2.62□□□□□ -1.99
LRCH3Q96II8 AL133373.1-201ENST00000497098 94 ntBASIC2.62□□□□□ -1.99
LRCH3Q96II8 RNA5SP264-201ENST00000363115 107 ntBASIC2.61□□□□□ -1.99
LRCH3Q96II8 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
LRCH3Q96II8 RNU6-765P-201ENST00000516916 99 ntBASIC2.61□□□□□ -1.99
LRCH3Q96II8 AC138907.6-201ENST00000568401 126 ntBASIC2.61□□□□□ -1.99
LRCH3Q96II8 AC138869.1-201ENST00000568623 124 ntBASIC2.61□□□□□ -1.99
LRCH3Q96II8 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
LRCH3Q96II8 RNA5SP325-201ENST00000363756 130 ntBASIC2.6□□□□□ -1.99
LRCH3Q96II8 RNU6-439P-201ENST00000384188 106 ntBASIC2.6□□□□□ -1.99
LRCH3Q96II8 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC2.6□□□□□ -1.99
LRCH3Q96II8 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.6□□□□□ -1.99
LRCH3Q96II8 RNU6-1057P-201ENST00000517162 102 ntBASIC2.6□□□□□ -1.99
LRCH3Q96II8 SNORA31.25-201ENST00000517242 134 ntBASIC2.6□□□□□ -1.99
LRCH3Q96II8 AC092634.7-201ENST00000621022 103 ntBASIC2.6□□□□□ -1.99
LRCH3Q96II8 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
LRCH3Q96II8 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
LRCH3Q96II8 AL596028.1-201ENST00000326971 197 ntBASIC2.59□□□□□ -1.99
LRCH3Q96II8 MIR378A-201ENST00000362177 66 ntBASIC2.59□□□□□ -1.99
LRCH3Q96II8 Y_RNA.224-201ENST00000364308 111 ntBASIC2.59□□□□□ -1.99
LRCH3Q96II8 U3.27-201ENST00000391237 200 ntBASIC2.59□□□□□ -1.99
LRCH3Q96II8 AL078603.1-201ENST00000603824 313 ntBASIC2.59□□□□□ -1.99
LRCH3Q96II8 MIR6845-201ENST00000613182 61 ntBASIC2.59□□□□□ -1.99
LRCH3Q96II8 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
LRCH3Q96II8 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 287.1 ms