Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 SNORA51.5-201ENST00000384126 131 ntBASIC-1.07□□□□□ -2.58
CCDC112Q8NEF3 RNU6-901P-201ENST00000384593 106 ntBASIC-1.07□□□□□ -2.58
CCDC112Q8NEF3 AL121914.1-201ENST00000450188 156 ntBASIC-1.07□□□□□ -2.58
CCDC112Q8NEF3 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-1.07□□□□□ -2.58
CCDC112Q8NEF3 RNU6-287P-201ENST00000516230 98 ntBASIC-1.07□□□□□ -2.58
CCDC112Q8NEF3 RNY3P15-201ENST00000516297 97 ntBASIC-1.07□□□□□ -2.58
CCDC112Q8NEF3 AL442663.2-201ENST00000554385 511 ntBASIC-1.07□□□□□ -2.58
CCDC112Q8NEF3 RNU2-4P-201ENST00000606190 192 ntBASIC-1.07□□□□□ -2.58
CCDC112Q8NEF3 Y_RNA.35-201ENST00000362601 101 ntBASIC-1.08□□□□□ -2.58
CCDC112Q8NEF3 Y_RNA.44-201ENST00000362676 108 ntBASIC-1.08□□□□□ -2.58
CCDC112Q8NEF3 RNU6-103P-201ENST00000363686 107 ntBASIC-1.08□□□□□ -2.58
CCDC112Q8NEF3 Y_RNA.276-201ENST00000364732 109 ntBASIC-1.08□□□□□ -2.58
CCDC112Q8NEF3 RNU6-690P-201ENST00000365242 106 ntBASIC-1.08□□□□□ -2.58
CCDC112Q8NEF3 Y_RNA.389-201ENST00000383924 113 ntBASIC-1.08□□□□□ -2.58
CCDC112Q8NEF3 RNU6-101P-201ENST00000410323 104 ntBASIC-1.08□□□□□ -2.58
CCDC112Q8NEF3 AC244090.1-201ENST00000441884 93 ntBASIC-1.08□□□□□ -2.58
CCDC112Q8NEF3 SNORD38.3-201ENST00000516599 73 ntBASIC-1.08□□□□□ -2.58
CCDC112Q8NEF3 AC009779.6-201ENST00000603972 165 ntBASIC-1.08□□□□□ -2.58
CCDC112Q8NEF3 Y_RNA.52-201ENST00000362760 96 ntBASIC-1.09□□□□□ -2.58
CCDC112Q8NEF3 Y_RNA.299-201ENST00000364973 94 ntBASIC-1.09□□□□□ -2.58
CCDC112Q8NEF3 RNU4-17P-201ENST00000365598 141 ntBASIC-1.09□□□□□ -2.58
CCDC112Q8NEF3 RNU6-472P-201ENST00000384299 107 ntBASIC-1.09□□□□□ -2.58
CCDC112Q8NEF3 RNU7-55P-201ENST00000459426 62 ntBASIC-1.09□□□□□ -2.58
CCDC112Q8NEF3 RNU7-2P-201ENST00000516096 62 ntBASIC-1.09□□□□□ -2.58
CCDC112Q8NEF3 Y_RNA.721-201ENST00000517207 102 ntBASIC-1.09□□□□□ -2.58
CCDC112Q8NEF3 RNU6-86P-201ENST00000606534 107 ntBASIC-1.09□□□□□ -2.58
CCDC112Q8NEF3 AC145423.2-201ENST00000610631 239 ntBASIC-1.09□□□□□ -2.58
CCDC112Q8NEF3 AC093783.1-201ENST00000612976 329 ntBASIC-1.09□□□□□ -2.58
CCDC112Q8NEF3 MIR376B-201ENST00000614515 100 ntBASIC-1.09□□□□□ -2.58
CCDC112Q8NEF3 Y_RNA.58-201ENST00000362807 102 ntBASIC-1.1□□□□□ -2.59
CCDC112Q8NEF3 RNY3P1-201ENST00000365085 102 ntBASIC-1.1□□□□□ -2.59
CCDC112Q8NEF3 Y_RNA.342-201ENST00000365352 113 ntBASIC-1.1□□□□□ -2.59
CCDC112Q8NEF3 RNU6-1062P-201ENST00000383908 107 ntBASIC-1.1□□□□□ -2.59
CCDC112Q8NEF3 Y_RNA.416-201ENST00000384014 113 ntBASIC-1.1□□□□□ -2.59
CCDC112Q8NEF3 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.1□□□□□ -2.59
CCDC112Q8NEF3 RNY1P7-201ENST00000384743 110 ntBASIC-1.1□□□□□ -2.59
CCDC112Q8NEF3 MIR652-201ENST00000385278 98 ntBASIC-1.1□□□□□ -2.59
CCDC112Q8NEF3 MIR196A1-201ENST00000388006 70 ntBASIC-1.1□□□□□ -2.59
CCDC112Q8NEF3 MTND5P22-201ENST00000458380 195 ntBASIC-1.1□□□□□ -2.59
CCDC112Q8NEF3 RNU6-881P-201ENST00000516813 102 ntBASIC-1.1□□□□□ -2.59
CCDC112Q8NEF3 RNU6-850P-201ENST00000516934 103 ntBASIC-1.1□□□□□ -2.59
CCDC112Q8NEF3 IGHVII-40-1-201ENST00000517316 58 ntBASIC-1.1□□□□□ -2.59
CCDC112Q8NEF3 AC007012.1-201ENST00000567192 175 ntBASIC-1.1□□□□□ -2.59
CCDC112Q8NEF3 MIR4744-201ENST00000581563 82 ntBASIC-1.1□□□□□ -2.59
CCDC112Q8NEF3 MIR4282-201ENST00000583613 67 ntBASIC-1.1□□□□□ -2.59
CCDC112Q8NEF3 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.1□□□□□ -2.59
CCDC112Q8NEF3 MIR516A2-201ENST00000384888 90 ntBASIC-1.11□□□□□ -2.59
CCDC112Q8NEF3 MIR516A1-201ENST00000385033 90 ntBASIC-1.11□□□□□ -2.59
CCDC112Q8NEF3 SNORA49-201ENST00000386157 136 ntBASIC-1.11□□□□□ -2.59
CCDC112Q8NEF3 MRPS18CP4-201ENST00000535821 231 ntBASIC-1.11□□□□□ -2.59
CCDC112Q8NEF3 U4.1-201ENST00000620349 87 ntBASIC-1.11□□□□□ -2.59
CCDC112Q8NEF3 RNU6-1163P-201ENST00000364516 107 ntBASIC-1.12□□□□□ -2.59
CCDC112Q8NEF3 SNORA13-201ENST00000458790 133 ntBASIC-1.12□□□□□ -2.59
CCDC112Q8NEF3 snoU13.13-201ENST00000458842 104 ntBASIC-1.12□□□□□ -2.59
CCDC112Q8NEF3 RNU6-1143P-201ENST00000516125 104 ntBASIC-1.12□□□□□ -2.59
CCDC112Q8NEF3 AC087741.2-201ENST00000619415 172 ntBASIC-1.12□□□□□ -2.59
CCDC112Q8NEF3 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.13□□□□□ -2.59
CCDC112Q8NEF3 SNORD115-35-201ENST00000365122 82 ntBASIC-1.13□□□□□ -2.59
CCDC112Q8NEF3 Y_RNA.447-201ENST00000384184 113 ntBASIC-1.13□□□□□ -2.59
CCDC112Q8NEF3 Y_RNA.529-201ENST00000384586 119 ntBASIC-1.13□□□□□ -2.59
CCDC112Q8NEF3 RNU6-578P-201ENST00000390980 103 ntBASIC-1.13□□□□□ -2.59
CCDC112Q8NEF3 RNU6-1109P-201ENST00000391187 107 ntBASIC-1.13□□□□□ -2.59
CCDC112Q8NEF3 RNU7-164P-201ENST00000459221 62 ntBASIC-1.13□□□□□ -2.59
CCDC112Q8NEF3 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.13□□□□□ -2.59
CCDC112Q8NEF3 RNU6-240P-201ENST00000516098 97 ntBASIC-1.13□□□□□ -2.59
CCDC112Q8NEF3 U6atac.1-201ENST00000616025 117 ntBASIC-1.13□□□□□ -2.59
CCDC112Q8NEF3 Y_RNA.215-201ENST00000364204 112 ntBASIC-1.14□□□□□ -2.59
CCDC112Q8NEF3 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.14□□□□□ -2.59
CCDC112Q8NEF3 RNU7-123P-201ENST00000515911 60 ntBASIC-1.14□□□□□ -2.59
CCDC112Q8NEF3 AC138907.4-201ENST00000570107 226 ntBASIC-1.14□□□□□ -2.59
CCDC112Q8NEF3 AC021443.1-201ENST00000604478 211 ntBASIC-1.14□□□□□ -2.59
CCDC112Q8NEF3 SNORD115-25-201ENST00000362619 82 ntBASIC-1.15□□□□□ -2.59
CCDC112Q8NEF3 Y_RNA.210-201ENST00000364161 110 ntBASIC-1.15□□□□□ -2.59
CCDC112Q8NEF3 Y_RNA.785-201ENST00000384290 109 ntBASIC-1.15□□□□□ -2.59
CCDC112Q8NEF3 SNORD77B-201ENST00000391112 67 ntBASIC-1.15□□□□□ -2.59
CCDC112Q8NEF3 Y_RNA.590-201ENST00000410140 107 ntBASIC-1.15□□□□□ -2.59
CCDC112Q8NEF3 RNU6-721P-201ENST00000410155 105 ntBASIC-1.15□□□□□ -2.59
CCDC112Q8NEF3 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.15□□□□□ -2.59
CCDC112Q8NEF3 RNU4-36P-201ENST00000364294 144 ntBASIC-1.16□□□□□ -2.6
CCDC112Q8NEF3 Y_RNA.360-201ENST00000365512 102 ntBASIC-1.16□□□□□ -2.6
CCDC112Q8NEF3 RNU6-643P-201ENST00000384018 107 ntBASIC-1.16□□□□□ -2.6
CCDC112Q8NEF3 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.16□□□□□ -2.6
CCDC112Q8NEF3 Y_RNA.556-201ENST00000384677 113 ntBASIC-1.16□□□□□ -2.6
CCDC112Q8NEF3 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.16□□□□□ -2.6
CCDC112Q8NEF3 RNU6-502P-201ENST00000362419 108 ntBASIC-1.17□□□□□ -2.6
CCDC112Q8NEF3 Y_RNA.207-201ENST00000364142 106 ntBASIC-1.17□□□□□ -2.6
CCDC112Q8NEF3 SNORD42.2-201ENST00000365570 69 ntBASIC-1.17□□□□□ -2.6
CCDC112Q8NEF3 RNU6-616P-201ENST00000384353 107 ntBASIC-1.17□□□□□ -2.6
CCDC112Q8NEF3 Y_RNA.488-201ENST00000384403 102 ntBASIC-1.17□□□□□ -2.6
CCDC112Q8NEF3 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-1.17□□□□□ -2.6
CCDC112Q8NEF3 AC113618.1-201ENST00000416747 285 ntBASIC-1.17□□□□□ -2.6
CCDC112Q8NEF3 SNORA40.17-201ENST00000517256 115 ntBASIC-1.17□□□□□ -2.6
CCDC112Q8NEF3 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-1.17□□□□□ -2.6
CCDC112Q8NEF3 U2.14-201ENST00000615943 113 ntBASIC-1.17□□□□□ -2.6
CCDC112Q8NEF3 TRDV1-202ENST00000621643 102 ntBASIC-1.17□□□□□ -2.6
CCDC112Q8NEF3 U6.100-201ENST00000636230 99 ntBASIC-1.17□□□□□ -2.6
CCDC112Q8NEF3 MIR369-201ENST00000362155 70 ntBASIC-1.18□□□□□ -2.6
CCDC112Q8NEF3 Y_RNA.262-201ENST00000364641 102 ntBASIC-1.18□□□□□ -2.6
CCDC112Q8NEF3 MIR34C-201ENST00000384831 77 ntBASIC-1.18□□□□□ -2.6
CCDC112Q8NEF3 MIR518B-201ENST00000385127 83 ntBASIC-1.18□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 278.9 ms