Protein–RNA interactions for Protein: Q02388

COL7A1, Collagen alpha-1(VII) chain, humanhuman

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1Q02388 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 RNU2-51P-201ENST00000410708 197 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 MTATP6P19-201ENST00000413797 659 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 SEPT14P3-201ENST00000439401 183 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-0.34□□□□□ -2.46
COL7A1Q02388 AL732372.2-207ENST00000445840 183 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 SEPT14P2-201ENST00000453405 183 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 RNU7-195P-201ENST00000458793 62 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 SEPT14P4-201ENST00000513445 186 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 RNU6-1281P-201ENST00000516223 105 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 RNU6-314P-201ENST00000516574 104 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 FO082796.1-201ENST00000523795 183 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 MIR4662B-201ENST00000579498 81 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 AC090574.1-201ENST00000623186 233 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 AC090617.10-201ENST00000624308 134 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 U6.92-201ENST00000636464 89 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 RNU6-495P-201ENST00000362995 107 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 RNU6-1205P-201ENST00000363625 106 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 RNU6-1059P-201ENST00000363752 98 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 Y_RNA.223-201ENST00000364290 113 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 Y_RNA.241-201ENST00000364470 117 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 Y_RNA.397-201ENST00000383950 98 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 Y_RNA.400-201ENST00000383963 111 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 RNU5A-2P-201ENST00000384337 116 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 MIR516A2-201ENST00000384888 90 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 MIR516A1-201ENST00000385033 90 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 MIR451A-201ENST00000385059 72 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 Y_RNA.584-201ENST00000391090 114 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 RNU6-248P-201ENST00000410720 107 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 Y_RNA.639-201ENST00000458981 102 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 RNU6-561P-201ENST00000516222 102 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 RNU6-397P-201ENST00000516226 104 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 Y_RNA.691-201ENST00000516611 103 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 RNU6-835P-201ENST00000516974 104 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 AL512360.1-201ENST00000555346 234 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 MIR3611-201ENST00000584484 83 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 MIR3942-201ENST00000585264 109 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 AC005014.2-201ENST00000607795 599 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 AC015540.1-201ENST00000615828 501 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 Z69908.1-201ENST00000622603 247 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 U6.106-201ENST00000636360 105 ntBASIC-0.34□□□□□ -2.46
COL7A1Q02388 Y_RNA.41-201ENST00000362646 102 ntBASIC-0.35□□□□□ -2.47
COL7A1Q02388 RNU6-194P-201ENST00000363862 105 ntBASIC-0.35□□□□□ -2.47
COL7A1Q02388 Y_RNA.394-201ENST00000383942 103 ntBASIC-0.35□□□□□ -2.47
COL7A1Q02388 RNU6-308P-201ENST00000390957 107 ntBASIC-0.35□□□□□ -2.47
COL7A1Q02388 Y_RNA.594-201ENST00000410373 140 ntBASIC-0.35□□□□□ -2.47
COL7A1Q02388 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC-0.35□□□□□ -2.47
COL7A1Q02388 MTND1P2-201ENST00000430604 821 ntBASIC-0.35□□□□□ -2.47
COL7A1Q02388 SNORD42B-201ENST00000458893 67 ntBASIC-0.35□□□□□ -2.47
COL7A1Q02388 MTND4P17-201ENST00000470444 350 ntBASIC-0.35□□□□□ -2.47
COL7A1Q02388 Y_RNA.678-201ENST00000516408 96 ntBASIC-0.35□□□□□ -2.47
COL7A1Q02388 Y_RNA.708-201ENST00000516950 96 ntBASIC-0.35□□□□□ -2.47
COL7A1Q02388 SCARNA24.2-201ENST00000516968 130 ntBASIC-0.35□□□□□ -2.47
COL7A1Q02388 AP002795.1-201ENST00000534879 84 ntBASIC-0.35□□□□□ -2.47
COL7A1Q02388 C8orf59P2-201ENST00000603441 271 ntBASIC-0.35□□□□□ -2.47
COL7A1Q02388 MIR6739-201ENST00000622461 75 ntBASIC-0.35□□□□□ -2.47
COL7A1Q02388 AL606534.2-204ENST00000635008 178 ntBASIC-0.35□□□□□ -2.47
COL7A1Q02388 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-0.35□□□□□ -2.47
COL7A1Q02388 RNU6-170P-201ENST00000362832 104 ntBASIC-0.35□□□□□ -2.47
COL7A1Q02388 Y_RNA.182-201ENST00000363880 111 ntBASIC-0.35□□□□□ -2.47
COL7A1Q02388 Y_RNA.222-201ENST00000364264 102 ntBASIC-0.35□□□□□ -2.47
COL7A1Q02388 Y_RNA.373-201ENST00000365600 103 ntBASIC-0.35□□□□□ -2.47
COL7A1Q02388 RNU6-472P-201ENST00000384299 107 ntBASIC-0.35□□□□□ -2.47
COL7A1Q02388 Y_RNA.502-201ENST00000384478 113 ntBASIC-0.35□□□□□ -2.47
COL7A1Q02388 MIR521-2-201ENST00000384818 87 ntBASIC-0.35□□□□□ -2.47
COL7A1Q02388 RNU6-466P-201ENST00000391224 103 ntBASIC-0.35□□□□□ -2.47
COL7A1Q02388 MTATP6P29-201ENST00000415057 132 ntBASIC-0.35□□□□□ -2.47
COL7A1Q02388 AC113618.1-201ENST00000416747 285 ntBASIC-0.35□□□□□ -2.47
COL7A1Q02388 MRPS35P2-201ENST00000508242 191 ntBASIC-0.35□□□□□ -2.47
COL7A1Q02388 RNU7-2P-201ENST00000516096 62 ntBASIC-0.35□□□□□ -2.47
COL7A1Q02388 AC068339.1-201ENST00000526965 141 ntBASIC-0.35□□□□□ -2.47
COL7A1Q02388 Y_RNA.812-201ENST00000610788 101 ntBASIC-0.35□□□□□ -2.47
COL7A1Q02388 Y_RNA.784-201ENST00000613803 101 ntBASIC-0.35□□□□□ -2.47
COL7A1Q02388 MIR548O2-201ENST00000616090 70 ntBASIC-0.35□□□□□ -2.47
COL7A1Q02388 Y_RNA.787-201ENST00000616522 101 ntBASIC-0.35□□□□□ -2.47
COL7A1Q02388 Y_RNA.780-201ENST00000617336 101 ntBASIC-0.35□□□□□ -2.47
COL7A1Q02388 Y_RNA.801-201ENST00000619005 101 ntBASIC-0.35□□□□□ -2.47
COL7A1Q02388 MIR3662-201ENST00000637030 95 ntBASIC-0.35□□□□□ -2.47
COL7A1Q02388 MIR4773-1-201ENST00000637203 78 ntBASIC-0.35□□□□□ -2.47
COL7A1Q02388 RNU6-664P-201ENST00000362381 107 ntBASIC-0.36□□□□□ -2.47
COL7A1Q02388 RNU6-1272P-201ENST00000362776 107 ntBASIC-0.36□□□□□ -2.47
COL7A1Q02388 SNORD115-27-201ENST00000364430 82 ntBASIC-0.36□□□□□ -2.47
COL7A1Q02388 Y_RNA.298-201ENST00000364960 107 ntBASIC-0.36□□□□□ -2.47
COL7A1Q02388 RNU6-996P-201ENST00000365438 107 ntBASIC-0.36□□□□□ -2.47
COL7A1Q02388 SNORA32-201ENST00000384072 121 ntBASIC-0.36□□□□□ -2.47
COL7A1Q02388 Y_RNA.521-201ENST00000384560 114 ntBASIC-0.36□□□□□ -2.47
COL7A1Q02388 Y_RNA.570-201ENST00000384750 101 ntBASIC-0.36□□□□□ -2.47
COL7A1Q02388 RNA5SP86-201ENST00000390869 98 ntBASIC-0.36□□□□□ -2.47
COL7A1Q02388 MIR513C-201ENST00000401352 84 ntBASIC-0.36□□□□□ -2.47
COL7A1Q02388 Y_RNA.591-201ENST00000410228 104 ntBASIC-0.36□□□□□ -2.47
COL7A1Q02388 AL731563.1-201ENST00000442202 214 ntBASIC-0.36□□□□□ -2.47
COL7A1Q02388 SNORD11.1-201ENST00000459482 85 ntBASIC-0.36□□□□□ -2.47
COL7A1Q02388 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-0.36□□□□□ -2.47
COL7A1Q02388 SERF1AP1-201ENST00000514575 187 ntBASIC-0.36□□□□□ -2.47
COL7A1Q02388 SCARNA15-202ENST00000516881 127 ntBASIC-0.36□□□□□ -2.47
COL7A1Q02388 RNU7-110P-201ENST00000516891 62 ntBASIC-0.36□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 309.5 ms