Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 MIR4771-2-201ENST00000577758 74 ntBASIC2.38□□□□□ -2.03
USP46P62068 MIR4771-1-201ENST00000582617 74 ntBASIC2.38□□□□□ -2.03
USP46P62068 ZNF209P-201ENST00000593450 2304 ntBASIC2.38□□□□□ -2.03
USP46P62068 AC103810.8-201ENST00000607347 118 ntBASIC2.38□□□□□ -2.03
USP46P62068 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.38□□□□□ -2.03
USP46P62068 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
USP46P62068 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
USP46P62068 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
USP46P62068 RNU6-1260P-201ENST00000362944 107 ntBASIC2.37□□□□□ -2.03
USP46P62068 RNU6-1051P-201ENST00000365471 102 ntBASIC2.37□□□□□ -2.03
USP46P62068 MIR30A-201ENST00000385092 71 ntBASIC2.37□□□□□ -2.03
USP46P62068 MIR221-201ENST00000385135 110 ntBASIC2.37□□□□□ -2.03
USP46P62068 MIR519A1-201ENST00000385257 85 ntBASIC2.37□□□□□ -2.03
USP46P62068 MIR1273D-201ENST00000577266 86 ntBASIC2.37□□□□□ -2.03
USP46P62068 MIR5694-201ENST00000581190 76 ntBASIC2.37□□□□□ -2.03
USP46P62068 MIR6840-201ENST00000611937 71 ntBASIC2.37□□□□□ -2.03
USP46P62068 MIR6766-201ENST00000622641 72 ntBASIC2.37□□□□□ -2.03
USP46P62068 SNORD33-201ENST00000362761 85 ntBASIC2.36□□□□□ -2.03
USP46P62068 SNORD113.3-201ENST00000364630 78 ntBASIC2.36□□□□□ -2.03
USP46P62068 snoU13.17-201ENST00000458802 104 ntBASIC2.36□□□□□ -2.03
USP46P62068 RNU6-539P-201ENST00000516665 103 ntBASIC2.36□□□□□ -2.03
USP46P62068 RNU6-165P-201ENST00000517170 99 ntBASIC2.36□□□□□ -2.03
USP46P62068 YWHAEP2-201ENST00000580066 112 ntBASIC2.36□□□□□ -2.03
USP46P62068 YWHAEP3-201ENST00000582767 121 ntBASIC2.36□□□□□ -2.03
USP46P62068 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
USP46P62068 Y_RNA.207-201ENST00000364142 106 ntBASIC2.35□□□□□ -2.03
USP46P62068 SNORD101-201ENST00000384027 73 ntBASIC2.35□□□□□ -2.03
USP46P62068 RPS27P16-201ENST00000425758 201 ntBASIC2.35□□□□□ -2.03
USP46P62068 SNORA44.1-201ENST00000517031 108 ntBASIC2.35□□□□□ -2.03
USP46P62068 MIR4648-201ENST00000580107 72 ntBASIC2.35□□□□□ -2.03
USP46P62068 U6.100-201ENST00000636230 99 ntBASIC2.35□□□□□ -2.03
USP46P62068 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
USP46P62068 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
USP46P62068 AC048334.1-201ENST00000477975 159 ntBASIC2.34□□□□□ -2.03
USP46P62068 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.34□□□□□ -2.03
USP46P62068 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.34□□□□□ -2.03
USP46P62068 AP000553.5-201ENST00000641933 54 ntBASIC2.34□□□□□ -2.03
USP46P62068 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
USP46P62068 RNU6-664P-201ENST00000362381 107 ntBASIC2.33□□□□□ -2.04
USP46P62068 RNY4P3-201ENST00000365254 95 ntBASIC2.33□□□□□ -2.04
USP46P62068 Y_RNA.371-201ENST00000365591 113 ntBASIC2.33□□□□□ -2.04
USP46P62068 SNORA64-201ENST00000384674 134 ntBASIC2.33□□□□□ -2.04
USP46P62068 MIR17-201ENST00000385012 84 ntBASIC2.33□□□□□ -2.04
USP46P62068 MIR125B2-201ENST00000385128 89 ntBASIC2.33□□□□□ -2.04
USP46P62068 Y_RNA.596-201ENST00000410462 109 ntBASIC2.33□□□□□ -2.04
USP46P62068 HMGN2P38-201ENST00000423806 265 ntBASIC2.33□□□□□ -2.04
USP46P62068 AC074348.1-201ENST00000426503 132 ntBASIC2.33□□□□□ -2.04
USP46P62068 RNU6-687P-201ENST00000516443 89 ntBASIC2.33□□□□□ -2.04
USP46P62068 RNU6-765P-201ENST00000516916 99 ntBASIC2.33□□□□□ -2.04
USP46P62068 MIR4696-201ENST00000581431 70 ntBASIC2.33□□□□□ -2.04
USP46P62068 MIR6873-201ENST00000622788 63 ntBASIC2.33□□□□□ -2.04
USP46P62068 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
USP46P62068 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
USP46P62068 RNA5SP432-201ENST00000362480 116 ntBASIC2.32□□□□□ -2.04
USP46P62068 SNORA8.1-201ENST00000384250 140 ntBASIC2.32□□□□□ -2.04
USP46P62068 RNU6-587P-201ENST00000391282 106 ntBASIC2.32□□□□□ -2.04
USP46P62068 AC097635.1-201ENST00000450678 155 ntBASIC2.32□□□□□ -2.04
USP46P62068 RNU7-156P-201ENST00000517214 74 ntBASIC2.32□□□□□ -2.04
USP46P62068 AC036111.3-201ENST00000526389 112 ntBASIC2.32□□□□□ -2.04
USP46P62068 AL512310.8-201ENST00000550183 120 ntBASIC2.32□□□□□ -2.04
USP46P62068 MIR3140-201ENST00000583685 90 ntBASIC2.32□□□□□ -2.04
USP46P62068 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.32□□□□□ -2.04
USP46P62068 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.31□□□□□ -2.04
USP46P62068 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
USP46P62068 MIR599-201ENST00000385069 95 ntBASIC2.31□□□□□ -2.04
USP46P62068 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
USP46P62068 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
USP46P62068 AC023827.1-201ENST00000569247 97 ntBASIC2.31□□□□□ -2.04
USP46P62068 RNU4-52P-201ENST00000384209 138 ntBASIC2.3□□□□□ -2.04
USP46P62068 SNORA75.2-201ENST00000391138 150 ntBASIC2.3□□□□□ -2.04
USP46P62068 SNORA75.3-201ENST00000391231 150 ntBASIC2.3□□□□□ -2.04
USP46P62068 RNU6-634P-201ENST00000459134 106 ntBASIC2.3□□□□□ -2.04
USP46P62068 AC138907.6-201ENST00000568401 126 ntBASIC2.3□□□□□ -2.04
USP46P62068 AC138869.1-201ENST00000568623 124 ntBASIC2.3□□□□□ -2.04
USP46P62068 DLEU2_3.1-201ENST00000620005 73 ntBASIC2.3□□□□□ -2.04
USP46P62068 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.3□□□□□ -2.04
USP46P62068 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
USP46P62068 Y_RNA.42-201ENST00000362660 108 ntBASIC2.29□□□□□ -2.04
USP46P62068 RNU6-364P-201ENST00000384387 107 ntBASIC2.29□□□□□ -2.04
USP46P62068 RN7SKP88-201ENST00000516847 250 ntBASIC2.29□□□□□ -2.04
USP46P62068 7SK.8-201ENST00000612110 250 ntBASIC2.29□□□□□ -2.04
USP46P62068 7SK.11-201ENST00000615477 250 ntBASIC2.29□□□□□ -2.04
USP46P62068 7SK.13-201ENST00000622040 250 ntBASIC2.29□□□□□ -2.04
USP46P62068 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.28□□□□□ -2.04
USP46P62068 RNU6-535P-201ENST00000384722 107 ntBASIC2.28□□□□□ -2.04
USP46P62068 MIR154-201ENST00000385243 84 ntBASIC2.28□□□□□ -2.04
USP46P62068 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.28□□□□□ -2.04
USP46P62068 snoU13.15-201ENST00000459407 104 ntBASIC2.28□□□□□ -2.04
USP46P62068 snoU13.26-201ENST00000459452 105 ntBASIC2.28□□□□□ -2.04
USP46P62068 AC125388.1-201ENST00000459631 156 ntBASIC2.28□□□□□ -2.04
USP46P62068 SNORA31.2-201ENST00000516019 134 ntBASIC2.28□□□□□ -2.04
USP46P62068 RNA5SP200-201ENST00000516360 103 ntBASIC2.28□□□□□ -2.04
USP46P62068 RNU7-40P-201ENST00000516397 64 ntBASIC2.28□□□□□ -2.04
USP46P62068 MIR514B-201ENST00000516774 80 ntBASIC2.28□□□□□ -2.04
USP46P62068 MIR4448-201ENST00000584360 86 ntBASIC2.28□□□□□ -2.04
USP46P62068 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.27□□□□□ -2.05
USP46P62068 RNU6-330P-201ENST00000363015 107 ntBASIC2.27□□□□□ -2.05
USP46P62068 Y_RNA.340-201ENST00000365330 92 ntBASIC2.27□□□□□ -2.05
USP46P62068 RNU6-649P-201ENST00000384463 107 ntBASIC2.27□□□□□ -2.05
USP46P62068 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 261.9 ms