Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 RNU6-54P-201ENST00000365563 107 ntBASIC-2.74□□□□□ -2.85
CKS1BP61024 RNU6-243P-201ENST00000391140 107 ntBASIC-2.74□□□□□ -2.85
CKS1BP61024 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-2.74□□□□□ -2.85
CKS1BP61024 RNU4-69P-201ENST00000410677 143 ntBASIC-2.74□□□□□ -2.85
CKS1BP61024 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-2.74□□□□□ -2.85
CKS1BP61024 VN1R91P-201ENST00000594377 169 ntBASIC-2.74□□□□□ -2.85
CKS1BP61024 MIR1321-201ENST00000637766 79 ntBASIC-2.74□□□□□ -2.85
CKS1BP61024 RNU6-228P-201ENST00000362700 106 ntBASIC-2.75□□□□□ -2.85
CKS1BP61024 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC-2.75□□□□□ -2.85
CKS1BP61024 AL161932.1-201ENST00000437408 146 ntBASIC-2.75□□□□□ -2.85
CKS1BP61024 AC107399.1-201ENST00000451226 265 ntBASIC-2.75□□□□□ -2.85
CKS1BP61024 RNU6-1006P-201ENST00000516998 103 ntBASIC-2.75□□□□□ -2.85
CKS1BP61024 Y_RNA.713-201ENST00000517013 96 ntBASIC-2.75□□□□□ -2.85
CKS1BP61024 Y_RNA.813-201ENST00000364639 102 ntBASIC-2.76□□□□□ -2.85
CKS1BP61024 SNORA63.6-201ENST00000364921 119 ntBASIC-2.76□□□□□ -2.85
CKS1BP61024 RNU6-746P-201ENST00000384112 109 ntBASIC-2.76□□□□□ -2.85
CKS1BP61024 RNU6-1247P-201ENST00000516622 98 ntBASIC-2.76□□□□□ -2.85
CKS1BP61024 IGHVII-40-1-201ENST00000517316 58 ntBASIC-2.76□□□□□ -2.85
CKS1BP61024 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-2.76□□□□□ -2.85
CKS1BP61024 SNORD115-33-201ENST00000363723 82 ntBASIC-2.77□□□□□ -2.85
CKS1BP61024 Y_RNA.199-201ENST00000364014 102 ntBASIC-2.77□□□□□ -2.85
CKS1BP61024 RNU6-728P-201ENST00000365375 104 ntBASIC-2.77□□□□□ -2.85
CKS1BP61024 SNORD77B-201ENST00000391112 67 ntBASIC-2.77□□□□□ -2.85
CKS1BP61024 AL731563.1-201ENST00000442202 214 ntBASIC-2.77□□□□□ -2.85
CKS1BP61024 MIR4464-201ENST00000580818 92 ntBASIC-2.77□□□□□ -2.85
CKS1BP61024 Y_RNA.314-201ENST00000365114 102 ntBASIC-2.78□□□□□ -2.85
CKS1BP61024 Y_RNA.357-201ENST00000365487 109 ntBASIC-2.78□□□□□ -2.85
CKS1BP61024 Y_RNA.389-201ENST00000383924 113 ntBASIC-2.78□□□□□ -2.85
CKS1BP61024 Y_RNA.475-201ENST00000384345 101 ntBASIC-2.78□□□□□ -2.85
CKS1BP61024 Y_RNA.521-201ENST00000384560 114 ntBASIC-2.78□□□□□ -2.85
CKS1BP61024 Y_RNA.526-201ENST00000384572 110 ntBASIC-2.78□□□□□ -2.85
CKS1BP61024 AC009779.6-201ENST00000603972 165 ntBASIC-2.78□□□□□ -2.85
CKS1BP61024 RNU6-1090P-201ENST00000364065 94 ntBASIC-2.79□□□□□ -2.86
CKS1BP61024 SNORD101-201ENST00000384027 73 ntBASIC-2.79□□□□□ -2.86
CKS1BP61024 SNORA26.4-201ENST00000391188 123 ntBASIC-2.79□□□□□ -2.86
CKS1BP61024 SNORD63.1-201ENST00000516178 80 ntBASIC-2.79□□□□□ -2.86
CKS1BP61024 Y_RNA.677-201ENST00000516401 85 ntBASIC-2.79□□□□□ -2.86
CKS1BP61024 MIR4308-201ENST00000580634 81 ntBASIC-2.79□□□□□ -2.86
CKS1BP61024 RNU6-845P-201ENST00000362578 103 ntBASIC-2.8□□□□□ -2.86
CKS1BP61024 SNORD36A-201ENST00000362874 73 ntBASIC-2.8□□□□□ -2.86
CKS1BP61024 Y_RNA.157-201ENST00000363638 102 ntBASIC-2.8□□□□□ -2.86
CKS1BP61024 MIR624-201ENST00000385217 97 ntBASIC-2.8□□□□□ -2.86
CKS1BP61024 SNORA79-201ENST00000408376 140 ntBASIC-2.8□□□□□ -2.86
CKS1BP61024 Y_RNA.679-201ENST00000516416 91 ntBASIC-2.8□□□□□ -2.86
CKS1BP61024 RNU2-35P-201ENST00000516446 142 ntBASIC-2.8□□□□□ -2.86
CKS1BP61024 Y_RNA.684-201ENST00000516510 99 ntBASIC-2.8□□□□□ -2.86
CKS1BP61024 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-2.8□□□□□ -2.86
CKS1BP61024 Y_RNA.88-201ENST00000363029 99 ntBASIC-2.81□□□□□ -2.86
CKS1BP61024 Y_RNA.143-201ENST00000363520 106 ntBASIC-2.81□□□□□ -2.86
CKS1BP61024 RNU6-164P-201ENST00000364604 103 ntBASIC-2.81□□□□□ -2.86
CKS1BP61024 Y_RNA.339-201ENST00000365325 102 ntBASIC-2.81□□□□□ -2.86
CKS1BP61024 Y_RNA.360-201ENST00000365512 102 ntBASIC-2.81□□□□□ -2.86
CKS1BP61024 MT-TT-201ENST00000387460 66 ntBASIC-2.81□□□□□ -2.86
CKS1BP61024 Y_RNA.678-201ENST00000516408 96 ntBASIC-2.81□□□□□ -2.86
CKS1BP61024 DLEU2_2.2-201ENST00000615474 90 ntBASIC-2.81□□□□□ -2.86
CKS1BP61024 AC048344.4-201ENST00000619744 527 ntBASIC-2.81□□□□□ -2.86
CKS1BP61024 AC022079.1-201ENST00000621546 602 ntBASIC-2.81□□□□□ -2.86
CKS1BP61024 Y_RNA.76-201ENST00000362931 109 ntBASIC-2.82□□□□□ -2.86
CKS1BP61024 Y_RNA.502-201ENST00000384478 113 ntBASIC-2.82□□□□□ -2.86
CKS1BP61024 RNU6-935P-201ENST00000410371 100 ntBASIC-2.82□□□□□ -2.86
CKS1BP61024 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC-2.82□□□□□ -2.86
CKS1BP61024 AC108019.1-201ENST00000512540 175 ntBASIC-2.82□□□□□ -2.86
CKS1BP61024 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-2.82□□□□□ -2.86
CKS1BP61024 SNORD115-27-201ENST00000364430 82 ntBASIC-2.83□□□□□ -2.86
CKS1BP61024 Y_RNA.250-201ENST00000364542 110 ntBASIC-2.83□□□□□ -2.86
CKS1BP61024 MIR487B-201ENST00000385021 84 ntBASIC-2.83□□□□□ -2.86
CKS1BP61024 AC096644.2-201ENST00000429278 159 ntBASIC-2.83□□□□□ -2.86
CKS1BP61024 AC099799.1-201ENST00000439809 192 ntBASIC-2.83□□□□□ -2.86
CKS1BP61024 RNU6-1213P-201ENST00000517075 94 ntBASIC-2.83□□□□□ -2.86
CKS1BP61024 MIR4696-201ENST00000581431 70 ntBASIC-2.83□□□□□ -2.86
CKS1BP61024 RNU6-664P-201ENST00000362381 107 ntBASIC-2.84□□□□□ -2.86
CKS1BP61024 RNU6-957P-201ENST00000363652 99 ntBASIC-2.84□□□□□ -2.86
CKS1BP61024 RNU6-312P-201ENST00000364629 107 ntBASIC-2.84□□□□□ -2.86
CKS1BP61024 RNU6-1042P-201ENST00000384204 107 ntBASIC-2.84□□□□□ -2.86
CKS1BP61024 SNORD38.2-201ENST00000384470 69 ntBASIC-2.84□□□□□ -2.86
CKS1BP61024 RNU6-559P-201ENST00000516151 98 ntBASIC-2.84□□□□□ -2.86
CKS1BP61024 RNA5SP26-201ENST00000362406 119 ntBASIC-2.85□□□□□ -2.87
CKS1BP61024 Y_RNA.176-201ENST00000363815 109 ntBASIC-2.85□□□□□ -2.87
CKS1BP61024 SNORD42B-201ENST00000458893 67 ntBASIC-2.85□□□□□ -2.87
CKS1BP61024 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC-2.85□□□□□ -2.87
CKS1BP61024 AC015540.1-201ENST00000615828 501 ntBASIC-2.85□□□□□ -2.87
CKS1BP61024 MIR664B-201ENST00000626756 61 ntBASIC-2.85□□□□□ -2.87
CKS1BP61024 RNU6-924P-201ENST00000362926 108 ntBASIC-2.86□□□□□ -2.87
CKS1BP61024 RNU6-690P-201ENST00000365242 106 ntBASIC-2.86□□□□□ -2.87
CKS1BP61024 RNU6-259P-201ENST00000383999 107 ntBASIC-2.86□□□□□ -2.87
CKS1BP61024 MIR496-201ENST00000385226 102 ntBASIC-2.86□□□□□ -2.87
CKS1BP61024 U3.27-201ENST00000391237 200 ntBASIC-2.86□□□□□ -2.87
CKS1BP61024 MTND4LP30-201ENST00000454092 297 ntBASIC-2.86□□□□□ -2.87
CKS1BP61024 MIR6888-201ENST00000621977 67 ntBASIC-2.86□□□□□ -2.87
CKS1BP61024 AP000720.1-201ENST00000625091 483 ntBASIC-2.86□□□□□ -2.87
CKS1BP61024 RNU6-1233P-201ENST00000362922 102 ntBASIC-2.87□□□□□ -2.87
CKS1BP61024 RNY1P11-201ENST00000363759 113 ntBASIC-2.87□□□□□ -2.87
CKS1BP61024 Y_RNA.556-201ENST00000384677 113 ntBASIC-2.87□□□□□ -2.87
CKS1BP61024 Y_RNA.569-201ENST00000384749 103 ntBASIC-2.87□□□□□ -2.87
CKS1BP61024 U8.20-201ENST00000459445 131 ntBASIC-2.87□□□□□ -2.87
CKS1BP61024 RNU6-235P-201ENST00000362644 107 ntBASIC-2.88□□□□□ -2.87
CKS1BP61024 SNORD115-19-201ENST00000363098 82 ntBASIC-2.88□□□□□ -2.87
CKS1BP61024 SNORD115-18-201ENST00000363293 82 ntBASIC-2.88□□□□□ -2.87
CKS1BP61024 Y_RNA.152-201ENST00000363578 100 ntBASIC-2.88□□□□□ -2.87
CKS1BP61024 SNORD115-17-201ENST00000364612 82 ntBASIC-2.88□□□□□ -2.87
Retrieved 100 of 98,524 protein–RNA pairs in 175.1 ms