Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 RNU7-164P-201ENST00000459221 62 ntBASIC-1.08□□□□□ -2.58
FOXA3P55318 RNY1P9-201ENST00000532431 109 ntBASIC-1.08□□□□□ -2.58
FOXA3P55318 AL442663.2-201ENST00000554385 511 ntBASIC-1.08□□□□□ -2.58
FOXA3P55318 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-1.08□□□□□ -2.58
FOXA3P55318 AC021443.1-201ENST00000604478 211 ntBASIC-1.08□□□□□ -2.58
FOXA3P55318 AC113139.1-201ENST00000605049 239 ntBASIC-1.08□□□□□ -2.58
FOXA3P55318 AC025253.1-201ENST00000613623 543 ntBASIC-1.08□□□□□ -2.58
FOXA3P55318 Y_RNA.76-201ENST00000362931 109 ntBASIC-1.09□□□□□ -2.58
FOXA3P55318 RNU6-957P-201ENST00000363652 99 ntBASIC-1.09□□□□□ -2.58
FOXA3P55318 Y_RNA.183-201ENST00000363882 113 ntBASIC-1.09□□□□□ -2.58
FOXA3P55318 RNU6-54P-201ENST00000365563 107 ntBASIC-1.09□□□□□ -2.58
FOXA3P55318 Y_RNA.474-201ENST00000384341 102 ntBASIC-1.09□□□□□ -2.58
FOXA3P55318 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.09□□□□□ -2.58
FOXA3P55318 SNORD116-29-201ENST00000384516 83 ntBASIC-1.09□□□□□ -2.58
FOXA3P55318 MIR34C-201ENST00000384831 77 ntBASIC-1.09□□□□□ -2.58
FOXA3P55318 RNU6-240P-201ENST00000516098 97 ntBASIC-1.09□□□□□ -2.58
FOXA3P55318 RNU6-1057P-201ENST00000517162 102 ntBASIC-1.09□□□□□ -2.58
FOXA3P55318 MIR6086-201ENST00000638065 55 ntBASIC-1.09□□□□□ -2.58
FOXA3P55318 Y_RNA.28-201ENST00000362554 111 ntBASIC-1.1□□□□□ -2.59
FOXA3P55318 SNORD36A-201ENST00000362874 73 ntBASIC-1.1□□□□□ -2.59
FOXA3P55318 Y_RNA.194-201ENST00000363985 102 ntBASIC-1.1□□□□□ -2.59
FOXA3P55318 RNU1-115P-201ENST00000365329 160 ntBASIC-1.1□□□□□ -2.59
FOXA3P55318 Y_RNA.353-201ENST00000365440 108 ntBASIC-1.1□□□□□ -2.59
FOXA3P55318 Y_RNA.556-201ENST00000384677 113 ntBASIC-1.1□□□□□ -2.59
FOXA3P55318 RNY4P36-201ENST00000391116 96 ntBASIC-1.1□□□□□ -2.59
FOXA3P55318 MIR1277-201ENST00000408536 78 ntBASIC-1.1□□□□□ -2.59
FOXA3P55318 MIR548F1-201ENST00000408667 84 ntBASIC-1.1□□□□□ -2.59
FOXA3P55318 RNU6-121P-201ENST00000410525 99 ntBASIC-1.1□□□□□ -2.59
FOXA3P55318 RNU4-43P-201ENST00000410628 137 ntBASIC-1.1□□□□□ -2.59
FOXA3P55318 RNU6-592P-201ENST00000411333 103 ntBASIC-1.1□□□□□ -2.59
FOXA3P55318 AL121914.1-201ENST00000450188 156 ntBASIC-1.1□□□□□ -2.59
FOXA3P55318 RNU7-123P-201ENST00000515911 60 ntBASIC-1.1□□□□□ -2.59
FOXA3P55318 RN7SKP19-201ENST00000516016 252 ntBASIC-1.1□□□□□ -2.59
FOXA3P55318 IGHVII-40-1-201ENST00000517316 58 ntBASIC-1.1□□□□□ -2.59
FOXA3P55318 AC138907.4-201ENST00000570107 226 ntBASIC-1.1□□□□□ -2.59
FOXA3P55318 AC084782.3-201ENST00000612282 578 ntBASIC-1.1□□□□□ -2.59
FOXA3P55318 MIR6738-201ENST00000619620 64 ntBASIC-1.1□□□□□ -2.59
FOXA3P55318 Y_RNA.16-201ENST00000362421 102 ntBASIC-1.11□□□□□ -2.59
FOXA3P55318 snoU13.19-201ENST00000459148 104 ntBASIC-1.11□□□□□ -2.59
FOXA3P55318 Y_RNA.718-201ENST00000517110 102 ntBASIC-1.11□□□□□ -2.59
FOXA3P55318 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-1.11□□□□□ -2.59
FOXA3P55318 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-1.11□□□□□ -2.59
FOXA3P55318 MIR6773-201ENST00000612812 74 ntBASIC-1.11□□□□□ -2.59
FOXA3P55318 U4.5-201ENST00000617137 123 ntBASIC-1.11□□□□□ -2.59
FOXA3P55318 Y_RNA.52-201ENST00000362760 96 ntBASIC-1.12□□□□□ -2.59
FOXA3P55318 Y_RNA.64-201ENST00000362845 102 ntBASIC-1.12□□□□□ -2.59
FOXA3P55318 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.12□□□□□ -2.59
FOXA3P55318 SNORD101-201ENST00000384027 73 ntBASIC-1.12□□□□□ -2.59
FOXA3P55318 RNU6-24P-201ENST00000384440 107 ntBASIC-1.12□□□□□ -2.59
FOXA3P55318 SNORD116-6-201ENST00000384711 96 ntBASIC-1.12□□□□□ -2.59
FOXA3P55318 MIR587-201ENST00000384845 96 ntBASIC-1.12□□□□□ -2.59
FOXA3P55318 MIR216B-201ENST00000390186 82 ntBASIC-1.12□□□□□ -2.59
FOXA3P55318 RNU6-1109P-201ENST00000391187 107 ntBASIC-1.12□□□□□ -2.59
FOXA3P55318 RNU6-381P-201ENST00000391259 108 ntBASIC-1.12□□□□□ -2.59
FOXA3P55318 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-1.12□□□□□ -2.59
FOXA3P55318 MIR4324-201ENST00000584846 72 ntBASIC-1.12□□□□□ -2.59
FOXA3P55318 Y_RNA.5-201ENST00000362334 102 ntBASIC-1.13□□□□□ -2.59
FOXA3P55318 Y_RNA.166-201ENST00000363730 102 ntBASIC-1.13□□□□□ -2.59
FOXA3P55318 SNORD114-4-201ENST00000363962 75 ntBASIC-1.13□□□□□ -2.59
FOXA3P55318 Y_RNA.252-201ENST00000364556 101 ntBASIC-1.13□□□□□ -2.59
FOXA3P55318 Y_RNA.518-201ENST00000384552 113 ntBASIC-1.13□□□□□ -2.59
FOXA3P55318 Y_RNA.521-201ENST00000384560 114 ntBASIC-1.13□□□□□ -2.59
FOXA3P55318 RNU6-651P-201ENST00000411040 105 ntBASIC-1.13□□□□□ -2.59
FOXA3P55318 AC138393.2-201ENST00000414742 246 ntBASIC-1.13□□□□□ -2.59
FOXA3P55318 RNA5SP236-201ENST00000516169 116 ntBASIC-1.13□□□□□ -2.59
FOXA3P55318 SCARNA24.2-201ENST00000516968 130 ntBASIC-1.13□□□□□ -2.59
FOXA3P55318 MIR4696-201ENST00000581431 70 ntBASIC-1.13□□□□□ -2.59
FOXA3P55318 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-1.13□□□□□ -2.59
FOXA3P55318 AC090574.1-201ENST00000623186 233 ntBASIC-1.13□□□□□ -2.59
FOXA3P55318 RNU6-664P-201ENST00000362381 107 ntBASIC-1.14□□□□□ -2.59
FOXA3P55318 Y_RNA.57-201ENST00000362806 113 ntBASIC-1.14□□□□□ -2.59
FOXA3P55318 Y_RNA.187-201ENST00000363918 113 ntBASIC-1.14□□□□□ -2.59
FOXA3P55318 Y_RNA.275-201ENST00000364726 110 ntBASIC-1.14□□□□□ -2.59
FOXA3P55318 Y_RNA.390-201ENST00000383932 102 ntBASIC-1.14□□□□□ -2.59
FOXA3P55318 MIRLET7B-201ENST00000385140 83 ntBASIC-1.14□□□□□ -2.59
FOXA3P55318 RNU6-337P-201ENST00000391243 106 ntBASIC-1.14□□□□□ -2.59
FOXA3P55318 SNORD42B-201ENST00000458893 67 ntBASIC-1.14□□□□□ -2.59
FOXA3P55318 snoU13.11-201ENST00000459219 104 ntBASIC-1.14□□□□□ -2.59
FOXA3P55318 MIR4306-201ENST00000583390 91 ntBASIC-1.14□□□□□ -2.59
FOXA3P55318 Y_RNA.3-201ENST00000362331 103 ntBASIC-1.15□□□□□ -2.59
FOXA3P55318 Y_RNA.78-201ENST00000362970 110 ntBASIC-1.15□□□□□ -2.59
FOXA3P55318 Y_RNA.160-201ENST00000363677 92 ntBASIC-1.15□□□□□ -2.59
FOXA3P55318 SNORD115-23-201ENST00000364461 82 ntBASIC-1.15□□□□□ -2.59
FOXA3P55318 Y_RNA.387-201ENST00000383918 102 ntBASIC-1.15□□□□□ -2.59
FOXA3P55318 SNORD38.2-201ENST00000384470 69 ntBASIC-1.15□□□□□ -2.59
FOXA3P55318 Y_RNA.516-201ENST00000384541 124 ntBASIC-1.15□□□□□ -2.59
FOXA3P55318 RNU6-30P-201ENST00000384561 107 ntBASIC-1.15□□□□□ -2.59
FOXA3P55318 Y_RNA.568-201ENST00000384742 113 ntBASIC-1.15□□□□□ -2.59
FOXA3P55318 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-1.15□□□□□ -2.59
FOXA3P55318 RNU6-588P-201ENST00000410281 105 ntBASIC-1.15□□□□□ -2.59
FOXA3P55318 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-1.15□□□□□ -2.59
FOXA3P55318 AC092794.1-201ENST00000612734 582 ntBASIC-1.15□□□□□ -2.59
FOXA3P55318 AL365265.1-201ENST00000621045 234 ntBASIC-1.15□□□□□ -2.59
FOXA3P55318 AC073869.6-201ENST00000640656 341 ntBASIC-1.15□□□□□ -2.59
FOXA3P55318 Y_RNA.173-201ENST00000363776 113 ntBASIC-1.16□□□□□ -2.6
FOXA3P55318 Y_RNA.279-201ENST00000364763 95 ntBASIC-1.16□□□□□ -2.6
FOXA3P55318 Y_RNA.298-201ENST00000364960 107 ntBASIC-1.16□□□□□ -2.6
FOXA3P55318 RNU6-10P-201ENST00000384036 107 ntBASIC-1.16□□□□□ -2.6
FOXA3P55318 RNU6-1104P-201ENST00000384723 104 ntBASIC-1.16□□□□□ -2.6
FOXA3P55318 MIR1302-11-201ENST00000408051 138 ntBASIC-1.16□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms