Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 SNORD127-201ENST00000458892 86 ntBASIC-0.39□□□□□ -2.47
ZNF140P52738 RNU7-13P-201ENST00000516413 62 ntBASIC-0.39□□□□□ -2.47
ZNF140P52738 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.39□□□□□ -2.47
ZNF140P52738 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.39□□□□□ -2.47
ZNF140P52738 MIR4473-201ENST00000583731 91 ntBASIC-0.39□□□□□ -2.47
ZNF140P52738 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.39□□□□□ -2.47
ZNF140P52738 SNORD114-11-201ENST00000363738 75 ntBASIC-0.4□□□□□ -2.47
ZNF140P52738 SNORD14C-201ENST00000365382 88 ntBASIC-0.4□□□□□ -2.47
ZNF140P52738 MIR539-201ENST00000365690 78 ntBASIC-0.4□□□□□ -2.47
ZNF140P52738 RNU6-571P-201ENST00000384128 107 ntBASIC-0.4□□□□□ -2.47
ZNF140P52738 MIR181B2-201ENST00000385004 89 ntBASIC-0.4□□□□□ -2.47
ZNF140P52738 MT-TI-201ENST00000387365 69 ntBASIC-0.4□□□□□ -2.47
ZNF140P52738 AL117351.2-201ENST00000513571 157 ntBASIC-0.4□□□□□ -2.47
ZNF140P52738 IGHVII-40-1-201ENST00000517316 58 ntBASIC-0.4□□□□□ -2.47
ZNF140P52738 AC108081.1-201ENST00000604358 221 ntBASIC-0.4□□□□□ -2.47
ZNF140P52738 AC069503.3-201ENST00000618674 145 ntBASIC-0.4□□□□□ -2.47
ZNF140P52738 AC087741.2-201ENST00000619415 172 ntBASIC-0.4□□□□□ -2.47
ZNF140P52738 U4.1-201ENST00000620349 87 ntBASIC-0.4□□□□□ -2.47
ZNF140P52738 RNU6-867P-201ENST00000364956 107 ntBASIC-0.41□□□□□ -2.48
ZNF140P52738 Y_RNA.299-201ENST00000364973 94 ntBASIC-0.41□□□□□ -2.48
ZNF140P52738 SNORD115-35-201ENST00000365122 82 ntBASIC-0.41□□□□□ -2.48
ZNF140P52738 RNU6-1227P-201ENST00000383981 107 ntBASIC-0.41□□□□□ -2.48
ZNF140P52738 Y_RNA.521-201ENST00000384560 114 ntBASIC-0.41□□□□□ -2.48
ZNF140P52738 MIR34C-201ENST00000384831 77 ntBASIC-0.41□□□□□ -2.48
ZNF140P52738 AC096531.1-201ENST00000419107 107 ntBASIC-0.41□□□□□ -2.48
ZNF140P52738 MTND4LP11-201ENST00000422184 280 ntBASIC-0.41□□□□□ -2.48
ZNF140P52738 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.41□□□□□ -2.48
ZNF140P52738 SNORD126-201ENST00000459475 77 ntBASIC-0.41□□□□□ -2.48
ZNF140P52738 RNU6-850P-201ENST00000516934 103 ntBASIC-0.41□□□□□ -2.48
ZNF140P52738 Y_RNA.720-201ENST00000517166 92 ntBASIC-0.41□□□□□ -2.48
ZNF140P52738 AL162726.3-218ENST00000636401 95 ntBASIC-0.41□□□□□ -2.48
ZNF140P52738 MIR4788-201ENST00000639104 80 ntBASIC-0.41□□□□□ -2.48
ZNF140P52738 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.42□□□□□ -2.48
ZNF140P52738 RNA5SP275-201ENST00000363936 118 ntBASIC-0.42□□□□□ -2.48
ZNF140P52738 RNU6-309P-201ENST00000364573 106 ntBASIC-0.42□□□□□ -2.48
ZNF140P52738 RNU6-818P-201ENST00000364837 108 ntBASIC-0.42□□□□□ -2.48
ZNF140P52738 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.42□□□□□ -2.48
ZNF140P52738 Y_RNA.435-201ENST00000384095 112 ntBASIC-0.42□□□□□ -2.48
ZNF140P52738 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.42□□□□□ -2.48
ZNF140P52738 MIR516A2-201ENST00000384888 90 ntBASIC-0.42□□□□□ -2.48
ZNF140P52738 MIR617-201ENST00000385030 97 ntBASIC-0.42□□□□□ -2.48
ZNF140P52738 MIR516A1-201ENST00000385033 90 ntBASIC-0.42□□□□□ -2.48
ZNF140P52738 MIR196A2-201ENST00000385189 110 ntBASIC-0.42□□□□□ -2.48
ZNF140P52738 RNY4P20-201ENST00000516678 93 ntBASIC-0.42□□□□□ -2.48
ZNF140P52738 YWHAEP2-201ENST00000580066 112 ntBASIC-0.42□□□□□ -2.48
ZNF140P52738 Y_RNA.20-201ENST00000362479 113 ntBASIC-0.43□□□□□ -2.48
ZNF140P52738 Y_RNA.85-201ENST00000363014 111 ntBASIC-0.43□□□□□ -2.48
ZNF140P52738 Y_RNA.360-201ENST00000365512 102 ntBASIC-0.43□□□□□ -2.48
ZNF140P52738 RNU6-47P-201ENST00000383866 107 ntBASIC-0.43□□□□□ -2.48
ZNF140P52738 SNORA75.5-201ENST00000391291 81 ntBASIC-0.43□□□□□ -2.48
ZNF140P52738 RNU6-588P-201ENST00000410281 105 ntBASIC-0.43□□□□□ -2.48
ZNF140P52738 MIR2113-201ENST00000459007 91 ntBASIC-0.43□□□□□ -2.48
ZNF140P52738 RNU7-74P-201ENST00000459104 62 ntBASIC-0.43□□□□□ -2.48
ZNF140P52738 Y_RNA.680-201ENST00000516441 93 ntBASIC-0.43□□□□□ -2.48
ZNF140P52738 Y_RNA.686-201ENST00000516548 134 ntBASIC-0.43□□□□□ -2.48
ZNF140P52738 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-0.43□□□□□ -2.48
ZNF140P52738 AL117187.1-201ENST00000555482 181 ntBASIC-0.43□□□□□ -2.48
ZNF140P52738 Y_RNA.773-201ENST00000607168 90 ntBASIC-0.43□□□□□ -2.48
ZNF140P52738 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.43□□□□□ -2.48
ZNF140P52738 SNORD27-201ENST00000363981 72 ntBASIC-0.44□□□□□ -2.48
ZNF140P52738 Y_RNA.251-201ENST00000364551 99 ntBASIC-0.44□□□□□ -2.48
ZNF140P52738 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.44□□□□□ -2.48
ZNF140P52738 MIR548H3-201ENST00000408771 118 ntBASIC-0.44□□□□□ -2.48
ZNF140P52738 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-0.44□□□□□ -2.48
ZNF140P52738 IGKV1-22-201ENST00000524313 326 ntBASIC-0.44□□□□□ -2.48
ZNF140P52738 MIR3658-201ENST00000636291 56 ntBASIC-0.44□□□□□ -2.48
ZNF140P52738 Y_RNA.65-201ENST00000362846 100 ntBASIC-0.45□□□□□ -2.48
ZNF140P52738 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.45□□□□□ -2.48
ZNF140P52738 SNORA51.5-201ENST00000384126 131 ntBASIC-0.45□□□□□ -2.48
ZNF140P52738 MT-TY-201ENST00000387409 66 ntBASIC-0.45□□□□□ -2.48
ZNF140P52738 RNU6-287P-201ENST00000516230 98 ntBASIC-0.45□□□□□ -2.48
ZNF140P52738 Y_RNA.668-201ENST00000516233 93 ntBASIC-0.45□□□□□ -2.48
ZNF140P52738 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.45□□□□□ -2.48
ZNF140P52738 uc_338.10-201ENST00000621872 182 ntBASIC-0.45□□□□□ -2.48
ZNF140P52738 U6.100-201ENST00000636230 99 ntBASIC-0.45□□□□□ -2.48
ZNF140P52738 U6.104-201ENST00000637979 90 ntBASIC-0.45□□□□□ -2.48
ZNF140P52738 Y_RNA.47-201ENST00000362697 108 ntBASIC-0.46□□□□□ -2.48
ZNF140P52738 Y_RNA.466-201ENST00000384294 113 ntBASIC-0.46□□□□□ -2.48
ZNF140P52738 RNU6-1160P-201ENST00000384546 104 ntBASIC-0.46□□□□□ -2.48
ZNF140P52738 MIR9-2-201ENST00000384838 87 ntBASIC-0.46□□□□□ -2.48
ZNF140P52738 MIR7-2-201ENST00000384970 110 ntBASIC-0.46□□□□□ -2.48
ZNF140P52738 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.46□□□□□ -2.48
ZNF140P52738 SNORD77B-201ENST00000391112 67 ntBASIC-0.46□□□□□ -2.48
ZNF140P52738 AL161932.1-201ENST00000437408 146 ntBASIC-0.46□□□□□ -2.48
ZNF140P52738 MTATP6P21-201ENST00000440681 189 ntBASIC-0.46□□□□□ -2.48
ZNF140P52738 RNU6-1219P-201ENST00000516143 112 ntBASIC-0.46□□□□□ -2.48
ZNF140P52738 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.46□□□□□ -2.48
ZNF140P52738 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-0.46□□□□□ -2.48
ZNF140P52738 MIR4432-201ENST00000581823 84 ntBASIC-0.46□□□□□ -2.48
ZNF140P52738 AC044792.1-201ENST00000593294 196 ntBASIC-0.46□□□□□ -2.48
ZNF140P52738 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.46□□□□□ -2.48
ZNF140P52738 AC145423.2-201ENST00000610631 239 ntBASIC-0.46□□□□□ -2.48
ZNF140P52738 SNORD36A-201ENST00000362874 73 ntBASIC-0.47□□□□□ -2.48
ZNF140P52738 SNORD115-19-201ENST00000363098 82 ntBASIC-0.47□□□□□ -2.48
ZNF140P52738 RNA5SP98-201ENST00000363158 137 ntBASIC-0.47□□□□□ -2.48
ZNF140P52738 SNORD115-18-201ENST00000363293 82 ntBASIC-0.47□□□□□ -2.48
ZNF140P52738 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.47□□□□□ -2.48
ZNF140P52738 SNORD115-17-201ENST00000364612 82 ntBASIC-0.47□□□□□ -2.48
ZNF140P52738 Y_RNA.326-201ENST00000365176 113 ntBASIC-0.47□□□□□ -2.48
ZNF140P52738 SNORD115-44-201ENST00000365391 82 ntBASIC-0.47□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms