Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 RNU6-1260P-201ENST00000362944 107 ntBASIC2.16□□□□□ -2.06
GPC1P35052 RNU6ATAC6P-201ENST00000408132 126 ntBASIC2.16□□□□□ -2.06
GPC1P35052 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.16□□□□□ -2.06
GPC1P35052 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.16□□□□□ -2.06
GPC1P35052 Y_RNA.36-201ENST00000362602 112 ntBASIC2.15□□□□□ -2.07
GPC1P35052 RNU6-154P-201ENST00000384306 106 ntBASIC2.15□□□□□ -2.07
GPC1P35052 SNORA67.3-201ENST00000384366 140 ntBASIC2.15□□□□□ -2.07
GPC1P35052 MIR519A1-201ENST00000385257 85 ntBASIC2.15□□□□□ -2.07
GPC1P35052 MIR1265-201ENST00000408444 86 ntBASIC2.15□□□□□ -2.07
GPC1P35052 MIR3945-201ENST00000581853 98 ntBASIC2.15□□□□□ -2.07
GPC1P35052 MIR4435-1-201ENST00000582552 80 ntBASIC2.15□□□□□ -2.07
GPC1P35052 MIR4713-201ENST00000582691 75 ntBASIC2.15□□□□□ -2.07
GPC1P35052 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.15□□□□□ -2.07
GPC1P35052 DLEU2_3.1-201ENST00000620005 73 ntBASIC2.15□□□□□ -2.07
GPC1P35052 MIR6766-201ENST00000622641 72 ntBASIC2.15□□□□□ -2.07
GPC1P35052 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.15□□□□□ -2.07
GPC1P35052 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
GPC1P35052 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
GPC1P35052 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
GPC1P35052 RNU6-340P-201ENST00000364005 107 ntBASIC2.14□□□□□ -2.07
GPC1P35052 RNU2-59P-201ENST00000410482 191 ntBASIC2.14□□□□□ -2.07
GPC1P35052 RNU6-1052P-201ENST00000411398 104 ntBASIC2.14□□□□□ -2.07
GPC1P35052 RNA5SP233-201ENST00000459153 113 ntBASIC2.14□□□□□ -2.07
GPC1P35052 RNU6-719P-201ENST00000516671 104 ntBASIC2.14□□□□□ -2.07
GPC1P35052 MIR5007-201ENST00000583098 95 ntBASIC2.14□□□□□ -2.07
GPC1P35052 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
GPC1P35052 RNU6-934P-201ENST00000365154 107 ntBASIC2.13□□□□□ -2.07
GPC1P35052 SNORD115-31-201ENST00000365318 82 ntBASIC2.13□□□□□ -2.07
GPC1P35052 RNU6-663P-201ENST00000391105 106 ntBASIC2.13□□□□□ -2.07
GPC1P35052 RNA5SP508-201ENST00000411327 119 ntBASIC2.13□□□□□ -2.07
GPC1P35052 snoU13.9-201ENST00000458927 103 ntBASIC2.13□□□□□ -2.07
GPC1P35052 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.13□□□□□ -2.07
GPC1P35052 AC079804.2-201ENST00000490376 200 ntBASIC2.13□□□□□ -2.07
GPC1P35052 MIR4771-2-201ENST00000577758 74 ntBASIC2.13□□□□□ -2.07
GPC1P35052 MIR5089-201ENST00000580047 84 ntBASIC2.13□□□□□ -2.07
GPC1P35052 MIR3937-201ENST00000580135 106 ntBASIC2.13□□□□□ -2.07
GPC1P35052 MIR4771-1-201ENST00000582617 74 ntBASIC2.13□□□□□ -2.07
GPC1P35052 U6.111-201ENST00000636093 83 ntBASIC2.13□□□□□ -2.07
GPC1P35052 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
GPC1P35052 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
GPC1P35052 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.12□□□□□ -2.07
GPC1P35052 U8.2-201ENST00000363156 134 ntBASIC2.12□□□□□ -2.07
GPC1P35052 Y_RNA.386-201ENST00000383913 105 ntBASIC2.12□□□□□ -2.07
GPC1P35052 RNU6-800P-201ENST00000384473 103 ntBASIC2.12□□□□□ -2.07
GPC1P35052 RNU6-291P-201ENST00000384720 107 ntBASIC2.12□□□□□ -2.07
GPC1P35052 MIR599-201ENST00000385069 95 ntBASIC2.12□□□□□ -2.07
GPC1P35052 MIR942-201ENST00000401111 86 ntBASIC2.12□□□□□ -2.07
GPC1P35052 AC097635.1-201ENST00000450678 155 ntBASIC2.12□□□□□ -2.07
GPC1P35052 AC079140.2-201ENST00000506193 142 ntBASIC2.12□□□□□ -2.07
GPC1P35052 AC008413.1-201ENST00000511864 177 ntBASIC2.12□□□□□ -2.07
GPC1P35052 MIR3664-201ENST00000579074 99 ntBASIC2.12□□□□□ -2.07
GPC1P35052 SNORD53-201ENST00000579969 78 ntBASIC2.12□□□□□ -2.07
GPC1P35052 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
GPC1P35052 AL359851.1-201ENST00000569460 4997 ntBASIC2.11□□□□□ -2.07
GPC1P35052 AL356379.1-201ENST00000414105 126 ntBASIC2.11□□□□□ -2.07
GPC1P35052 HMGN2P38-201ENST00000423806 265 ntBASIC2.11□□□□□ -2.07
GPC1P35052 MIR3124-201ENST00000582636 67 ntBASIC2.11□□□□□ -2.07
GPC1P35052 AL627230.6-201ENST00000611129 280 ntBASIC2.11□□□□□ -2.07
GPC1P35052 MIR6132-201ENST00000622083 109 ntBASIC2.11□□□□□ -2.07
GPC1P35052 RNA5SP289-201ENST00000362332 137 ntBASIC2.1□□□□□ -2.07
GPC1P35052 RNU6-681P-201ENST00000364012 104 ntBASIC2.1□□□□□ -2.07
GPC1P35052 SNORD1A-201ENST00000364968 72 ntBASIC2.1□□□□□ -2.07
GPC1P35052 RNU4-52P-201ENST00000384209 138 ntBASIC2.1□□□□□ -2.07
GPC1P35052 MIR221-201ENST00000385135 110 ntBASIC2.1□□□□□ -2.07
GPC1P35052 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.1□□□□□ -2.07
GPC1P35052 AC104435.1-201ENST00000483483 166 ntBASIC2.1□□□□□ -2.07
GPC1P35052 MIR4299-201ENST00000577899 72 ntBASIC2.1□□□□□ -2.07
GPC1P35052 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
GPC1P35052 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.07
GPC1P35052 Y_RNA.205-201ENST00000364128 113 ntBASIC2.09□□□□□ -2.07
GPC1P35052 SNORD113.3-201ENST00000364630 78 ntBASIC2.09□□□□□ -2.07
GPC1P35052 RNU6-1065P-201ENST00000384513 106 ntBASIC2.09□□□□□ -2.07
GPC1P35052 MIR125B2-201ENST00000385128 89 ntBASIC2.09□□□□□ -2.07
GPC1P35052 MIR676-201ENST00000390702 67 ntBASIC2.09□□□□□ -2.07
GPC1P35052 RNU6-765P-201ENST00000516916 99 ntBASIC2.09□□□□□ -2.07
GPC1P35052 RNU7-156P-201ENST00000517214 74 ntBASIC2.09□□□□□ -2.07
GPC1P35052 AC138907.6-201ENST00000568401 126 ntBASIC2.09□□□□□ -2.07
GPC1P35052 AC138869.1-201ENST00000568623 124 ntBASIC2.09□□□□□ -2.07
GPC1P35052 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.09□□□□□ -2.07
GPC1P35052 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
GPC1P35052 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
GPC1P35052 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
GPC1P35052 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
GPC1P35052 MIR451A-201ENST00000385059 72 ntBASIC2.08□□□□□ -2.08
GPC1P35052 RNU6-935P-201ENST00000410371 100 ntBASIC2.08□□□□□ -2.08
GPC1P35052 HMGN2P19-201ENST00000425149 265 ntBASIC2.08□□□□□ -2.08
GPC1P35052 HMGN2P23-201ENST00000456759 269 ntBASIC2.08□□□□□ -2.08
GPC1P35052 MIR3675-201ENST00000583661 73 ntBASIC2.08□□□□□ -2.08
GPC1P35052 AP000553.5-201ENST00000641933 54 ntBASIC2.08□□□□□ -2.08
GPC1P35052 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
GPC1P35052 MIR1261-201ENST00000408659 82 ntBASIC2.07□□□□□ -2.08
GPC1P35052 RNU6-165P-201ENST00000517170 99 ntBASIC2.07□□□□□ -2.08
GPC1P35052 MIR6873-201ENST00000622788 63 ntBASIC2.07□□□□□ -2.08
GPC1P35052 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
GPC1P35052 MIR302D-201ENST00000362275 68 ntBASIC2.06□□□□□ -2.08
GPC1P35052 MIR337-201ENST00000362281 93 ntBASIC2.06□□□□□ -2.08
GPC1P35052 RNU6-895P-201ENST00000384125 103 ntBASIC2.06□□□□□ -2.08
GPC1P35052 RNU6-535P-201ENST00000384722 107 ntBASIC2.06□□□□□ -2.08
GPC1P35052 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
GPC1P35052 AC097510.1-201ENST00000510945 133 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 181.7 ms