Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 AP003327.1-201ENST00000529684 127 ntBASIC0.69□□□□□ -2.3
MMP2P08253 Y_RNA.119-201ENST00000363301 96 ntBASIC0.68□□□□□ -2.3
MMP2P08253 RNY1P2-201ENST00000364820 117 ntBASIC0.68□□□□□ -2.3
MMP2P08253 Y_RNA.549-201ENST00000384657 102 ntBASIC0.68□□□□□ -2.3
MMP2P08253 MIR548A1-201ENST00000385041 97 ntBASIC0.68□□□□□ -2.3
MMP2P08253 MIR548A3-201ENST00000385297 97 ntBASIC0.68□□□□□ -2.3
MMP2P08253 SNORD100-201ENST00000408573 76 ntBASIC0.68□□□□□ -2.3
MMP2P08253 AL353813.1-201ENST00000440700 253 ntBASIC0.68□□□□□ -2.3
MMP2P08253 RNU6-521P-201ENST00000516663 105 ntBASIC0.68□□□□□ -2.3
MMP2P08253 AC007012.1-201ENST00000567192 175 ntBASIC0.68□□□□□ -2.3
MMP2P08253 AC138907.6-201ENST00000568401 126 ntBASIC0.68□□□□□ -2.3
MMP2P08253 MTND5P34-201ENST00000568888 325 ntBASIC0.68□□□□□ -2.3
MMP2P08253 AL670379.3-201ENST00000605040 251 ntBASIC0.68□□□□□ -2.3
MMP2P08253 MIR376B-201ENST00000614515 100 ntBASIC0.68□□□□□ -2.3
MMP2P08253 MIR18A-201ENST00000362310 71 ntBASIC0.67□□□□□ -2.3
MMP2P08253 RNU4-67P-201ENST00000364569 141 ntBASIC0.67□□□□□ -2.3
MMP2P08253 RNU6-865P-201ENST00000364772 107 ntBASIC0.67□□□□□ -2.3
MMP2P08253 RNA5SP117-201ENST00000365294 118 ntBASIC0.67□□□□□ -2.3
MMP2P08253 SNORA19-201ENST00000384737 128 ntBASIC0.67□□□□□ -2.3
MMP2P08253 MIR34C-201ENST00000384831 77 ntBASIC0.67□□□□□ -2.3
MMP2P08253 RNU6-479P-201ENST00000516348 105 ntBASIC0.67□□□□□ -2.3
MMP2P08253 RNU6-62P-201ENST00000516526 102 ntBASIC0.67□□□□□ -2.3
MMP2P08253 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.67□□□□□ -2.3
MMP2P08253 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.67□□□□□ -2.3
MMP2P08253 AP001362.1-201ENST00000625165 124 ntBASIC0.67□□□□□ -2.3
MMP2P08253 RNU4-58P-201ENST00000363192 141 ntBASIC0.66□□□□□ -2.3
MMP2P08253 Y_RNA.205-201ENST00000364128 113 ntBASIC0.66□□□□□ -2.3
MMP2P08253 RNA5SP205-201ENST00000364653 136 ntBASIC0.66□□□□□ -2.3
MMP2P08253 Y_RNA.328-201ENST00000365208 113 ntBASIC0.66□□□□□ -2.3
MMP2P08253 RNY1P8-201ENST00000383970 114 ntBASIC0.66□□□□□ -2.3
MMP2P08253 RNU6-291P-201ENST00000384720 107 ntBASIC0.66□□□□□ -2.3
MMP2P08253 MIR508-201ENST00000384857 115 ntBASIC0.66□□□□□ -2.3
MMP2P08253 MIR216A-201ENST00000385063 110 ntBASIC0.66□□□□□ -2.3
MMP2P08253 RNU6-1154P-201ENST00000391001 104 ntBASIC0.66□□□□□ -2.3
MMP2P08253 SNORA7.5-201ENST00000410672 110 ntBASIC0.66□□□□□ -2.3
MMP2P08253 RNU6-1194P-201ENST00000516208 104 ntBASIC0.66□□□□□ -2.3
MMP2P08253 RNU6-313P-201ENST00000516317 112 ntBASIC0.66□□□□□ -2.3
MMP2P08253 MIR4679-2-201ENST00000578358 77 ntBASIC0.66□□□□□ -2.3
MMP2P08253 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
MMP2P08253 Y_RNA.32-201ENST00000362589 110 ntBASIC0.65□□□□□ -2.31
MMP2P08253 RNU6-363P-201ENST00000362895 105 ntBASIC0.65□□□□□ -2.31
MMP2P08253 RNU4-45P-201ENST00000365469 141 ntBASIC0.65□□□□□ -2.31
MMP2P08253 RNY1P4-201ENST00000384595 115 ntBASIC0.65□□□□□ -2.31
MMP2P08253 RNU6-816P-201ENST00000390914 107 ntBASIC0.65□□□□□ -2.31
MMP2P08253 RNU6-679P-201ENST00000391003 106 ntBASIC0.65□□□□□ -2.31
MMP2P08253 RNU6-1268P-201ENST00000391214 107 ntBASIC0.65□□□□□ -2.31
MMP2P08253 RNU6-1239P-201ENST00000391310 107 ntBASIC0.65□□□□□ -2.31
MMP2P08253 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.65□□□□□ -2.31
MMP2P08253 RNU2-51P-201ENST00000410708 197 ntBASIC0.65□□□□□ -2.31
MMP2P08253 AL606753.1-201ENST00000427435 87 ntBASIC0.65□□□□□ -2.31
MMP2P08253 Y_RNA.697-201ENST00000516776 113 ntBASIC0.65□□□□□ -2.31
MMP2P08253 RN7SL793P-201ENST00000583259 296 ntBASIC0.65□□□□□ -2.31
MMP2P08253 AL590095.2-201ENST00000604136 117 ntBASIC0.65□□□□□ -2.31
MMP2P08253 AL162726.3-218ENST00000636401 95 ntBASIC0.65□□□□□ -2.31
MMP2P08253 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.64□□□□□ -2.31
MMP2P08253 Y_RNA.98-201ENST00000363109 102 ntBASIC0.64□□□□□ -2.31
MMP2P08253 Y_RNA.507-201ENST00000384500 99 ntBASIC0.64□□□□□ -2.31
MMP2P08253 RNU6-880P-201ENST00000384526 107 ntBASIC0.64□□□□□ -2.31
MMP2P08253 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.64□□□□□ -2.31
MMP2P08253 MIR4714-201ENST00000580728 77 ntBASIC0.64□□□□□ -2.31
MMP2P08253 SNORA63.5-201ENST00000363548 123 ntBASIC0.63□□□□□ -2.31
MMP2P08253 RNU6-429P-201ENST00000384582 108 ntBASIC0.63□□□□□ -2.31
MMP2P08253 Y_RNA.536-201ENST00000384621 113 ntBASIC0.63□□□□□ -2.31
MMP2P08253 RNU6-476P-201ENST00000384726 107 ntBASIC0.63□□□□□ -2.31
MMP2P08253 RPL39P34-201ENST00000477141 156 ntBASIC0.63□□□□□ -2.31
MMP2P08253 RNU6-1006P-201ENST00000516998 103 ntBASIC0.63□□□□□ -2.31
MMP2P08253 U2.22-201ENST00000636441 106 ntBASIC0.63□□□□□ -2.31
MMP2P08253 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.63□□□□□ -2.31
MMP2P08253 Y_RNA.35-201ENST00000362601 101 ntBASIC0.62□□□□□ -2.31
MMP2P08253 RNU6-1313P-201ENST00000362622 102 ntBASIC0.62□□□□□ -2.31
MMP2P08253 Y_RNA.85-201ENST00000363014 111 ntBASIC0.62□□□□□ -2.31
MMP2P08253 Y_RNA.155-201ENST00000363632 101 ntBASIC0.62□□□□□ -2.31
MMP2P08253 Y_RNA.360-201ENST00000365512 102 ntBASIC0.62□□□□□ -2.31
MMP2P08253 RNU6-1144P-201ENST00000384247 104 ntBASIC0.62□□□□□ -2.31
MMP2P08253 SNORD116-21-201ENST00000384507 92 ntBASIC0.62□□□□□ -2.31
MMP2P08253 RNU6-535P-201ENST00000384722 107 ntBASIC0.62□□□□□ -2.31
MMP2P08253 MIR140-201ENST00000385282 100 ntBASIC0.62□□□□□ -2.31
MMP2P08253 MIR1912-201ENST00000410389 80 ntBASIC0.62□□□□□ -2.31
MMP2P08253 RNU6-733P-201ENST00000410759 104 ntBASIC0.62□□□□□ -2.31
MMP2P08253 SNORA31.14-201ENST00000516728 116 ntBASIC0.62□□□□□ -2.31
MMP2P08253 uc_338.16-201ENST00000621804 95 ntBASIC0.62□□□□□ -2.31
MMP2P08253 MIR101-2-201ENST00000362195 79 ntBASIC0.61□□□□□ -2.31
MMP2P08253 Y_RNA.281-201ENST00000364774 94 ntBASIC0.61□□□□□ -2.31
MMP2P08253 Y_RNA.309-201ENST00000365046 111 ntBASIC0.61□□□□□ -2.31
MMP2P08253 RNU6-409P-201ENST00000384114 104 ntBASIC0.61□□□□□ -2.31
MMP2P08253 RNU6-1201P-201ENST00000384227 107 ntBASIC0.61□□□□□ -2.31
MMP2P08253 RNU6-1064P-201ENST00000410626 104 ntBASIC0.61□□□□□ -2.31
MMP2P08253 MIR3678-201ENST00000578455 94 ntBASIC0.61□□□□□ -2.31
MMP2P08253 MIR4500-201ENST00000579472 76 ntBASIC0.61□□□□□ -2.31
MMP2P08253 MIR6129-201ENST00000616087 109 ntBASIC0.61□□□□□ -2.31
MMP2P08253 Y_RNA.174-201ENST00000363781 105 ntBASIC0.6□□□□□ -2.31
MMP2P08253 RNA5SP245-201ENST00000364239 121 ntBASIC0.6□□□□□ -2.31
MMP2P08253 Y_RNA.247-201ENST00000364500 92 ntBASIC0.6□□□□□ -2.31
MMP2P08253 MIR644A-201ENST00000385262 94 ntBASIC0.6□□□□□ -2.31
MMP2P08253 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.6□□□□□ -2.31
MMP2P08253 BX276092.1-201ENST00000427368 251 ntBASIC0.6□□□□□ -2.31
MMP2P08253 SNRPGP12-201ENST00000449481 213 ntBASIC0.6□□□□□ -2.31
MMP2P08253 RNU6-469P-201ENST00000516253 101 ntBASIC0.6□□□□□ -2.31
MMP2P08253 RNA5SP121-201ENST00000516537 101 ntBASIC0.6□□□□□ -2.31
MMP2P08253 AC018659.1-201ENST00000551083 169 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 149.5 ms