Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 RNU7-185P-201ENST00000459215 60 ntBASIC2.54□□□□□ -2
ACTN4O43707 RPL23AP94-201ENST00000512518 302 ntBASIC2.54□□□□□ -2
ACTN4O43707 MIR514B-201ENST00000516774 80 ntBASIC2.54□□□□□ -2
ACTN4O43707 AC015688.6-201ENST00000577737 104 ntBASIC2.54□□□□□ -2
ACTN4O43707 MIR4435-1-201ENST00000582552 80 ntBASIC2.54□□□□□ -2
ACTN4O43707 U6.81-201ENST00000612550 106 ntBASIC2.54□□□□□ -2
ACTN4O43707 RNU1-52P-201ENST00000384190 164 ntBASIC2.53□□□□□ -2
ACTN4O43707 RNU6-935P-201ENST00000410371 100 ntBASIC2.53□□□□□ -2
ACTN4O43707 RNU6-1052P-201ENST00000411398 104 ntBASIC2.53□□□□□ -2
ACTN4O43707 AC097635.1-201ENST00000450678 155 ntBASIC2.53□□□□□ -2
ACTN4O43707 AC104435.1-201ENST00000483483 166 ntBASIC2.53□□□□□ -2
ACTN4O43707 RNU6-719P-201ENST00000516671 104 ntBASIC2.53□□□□□ -2
ACTN4O43707 MIR4672-201ENST00000583126 81 ntBASIC2.53□□□□□ -2
ACTN4O43707 RNA5SP276-201ENST00000362580 94 ntBASIC2.52□□□□□ -2.01
ACTN4O43707 SNORA24B-201ENST00000384176 131 ntBASIC2.52□□□□□ -2.01
ACTN4O43707 MTRNR2L2-201ENST00000604882 87 ntBASIC2.52□□□□□ -2.01
ACTN4O43707 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
ACTN4O43707 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.52□□□□□ -2.01
ACTN4O43707 RNU6-824P-201ENST00000363724 104 ntBASIC2.51□□□□□ -2.01
ACTN4O43707 RNA5SP212-201ENST00000391223 107 ntBASIC2.51□□□□□ -2.01
ACTN4O43707 MIR2113-201ENST00000459007 91 ntBASIC2.51□□□□□ -2.01
ACTN4O43707 RNA5SP24-201ENST00000516478 95 ntBASIC2.51□□□□□ -2.01
ACTN4O43707 MIR5694-201ENST00000581190 76 ntBASIC2.51□□□□□ -2.01
ACTN4O43707 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.5□□□□□ -2.01
ACTN4O43707 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
ACTN4O43707 MIRLET7G-201ENST00000362280 84 ntBASIC2.5□□□□□ -2.01
ACTN4O43707 SNORD115-22-201ENST00000364456 82 ntBASIC2.5□□□□□ -2.01
ACTN4O43707 MIR451A-201ENST00000385059 72 ntBASIC2.5□□□□□ -2.01
ACTN4O43707 MIR599-201ENST00000385069 95 ntBASIC2.5□□□□□ -2.01
ACTN4O43707 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
ACTN4O43707 DLEU2_3.2-201ENST00000612883 73 ntBASIC2.5□□□□□ -2.01
ACTN4O43707 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
ACTN4O43707 ZNF658B-202ENST00000615961 3375 ntBASIC2.5□□□□□ -2.01
ACTN4O43707 RNU6-1216P-201ENST00000362590 107 ntBASIC2.49□□□□□ -2.01
ACTN4O43707 RNU6-765P-201ENST00000516916 99 ntBASIC2.49□□□□□ -2.01
ACTN4O43707 AC138907.6-201ENST00000568401 126 ntBASIC2.49□□□□□ -2.01
ACTN4O43707 AC138869.1-201ENST00000568623 124 ntBASIC2.49□□□□□ -2.01
ACTN4O43707 SNORA77B-201ENST00000578179 125 ntBASIC2.49□□□□□ -2.01
ACTN4O43707 MIR5002-201ENST00000584713 97 ntBASIC2.49□□□□□ -2.01
ACTN4O43707 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
ACTN4O43707 MIR221-201ENST00000385135 110 ntBASIC2.48□□□□□ -2.01
ACTN4O43707 MIR524-201ENST00000385242 87 ntBASIC2.48□□□□□ -2.01
ACTN4O43707 RNU6ATAC6P-201ENST00000408132 126 ntBASIC2.48□□□□□ -2.01
ACTN4O43707 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
ACTN4O43707 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
ACTN4O43707 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.48□□□□□ -2.01
ACTN4O43707 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
ACTN4O43707 SNORD83.1-201ENST00000411362 77 ntBASIC2.47□□□□□ -2.01
ACTN4O43707 snoU13.21-201ENST00000459368 105 ntBASIC2.47□□□□□ -2.01
ACTN4O43707 AC055731.1-201ENST00000474387 401 ntBASIC2.47□□□□□ -2.01
ACTN4O43707 RNU6-1057P-201ENST00000517162 102 ntBASIC2.47□□□□□ -2.01
ACTN4O43707 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
ACTN4O43707 SNORD113.1-201ENST00000363280 73 ntBASIC2.46□□□□□ -2.02
ACTN4O43707 RNU6-604P-201ENST00000390917 100 ntBASIC2.46□□□□□ -2.02
ACTN4O43707 IST1-227ENST00000626438 126 ntTSL 5 BASIC2.46□□□□□ -2.02
ACTN4O43707 AC103706.3-201ENST00000636297 85 ntBASIC2.46□□□□□ -2.02
ACTN4O43707 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
ACTN4O43707 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
ACTN4O43707 RNA5SP126-201ENST00000365092 109 ntBASIC2.45□□□□□ -2.02
ACTN4O43707 RNU6-301P-201ENST00000384277 107 ntBASIC2.45□□□□□ -2.02
ACTN4O43707 MIR4773-1-201ENST00000637203 78 ntBASIC2.45□□□□□ -2.02
ACTN4O43707 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
ACTN4O43707 MIR449A-201ENST00000362113 91 ntBASIC2.44□□□□□ -2.02
ACTN4O43707 SNORD116-24-201ENST00000384549 92 ntBASIC2.44□□□□□ -2.02
ACTN4O43707 RNU6-1177P-201ENST00000391058 104 ntBASIC2.44□□□□□ -2.02
ACTN4O43707 RNU6-274P-201ENST00000459566 107 ntBASIC2.44□□□□□ -2.02
ACTN4O43707 RNA5SP200-201ENST00000516360 103 ntBASIC2.44□□□□□ -2.02
ACTN4O43707 MIR4511-201ENST00000582784 87 ntBASIC2.44□□□□□ -2.02
ACTN4O43707 MIR6840-201ENST00000611937 71 ntBASIC2.44□□□□□ -2.02
ACTN4O43707 MIR8074-201ENST00000615081 81 ntBASIC2.44□□□□□ -2.02
ACTN4O43707 MIR8063-201ENST00000621930 81 ntBASIC2.44□□□□□ -2.02
ACTN4O43707 AL359851.1-201ENST00000569460 4997 ntBASIC2.44□□□□□ -2.02
ACTN4O43707 RNU6-934P-201ENST00000365154 107 ntBASIC2.43□□□□□ -2.02
ACTN4O43707 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
ACTN4O43707 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.42□□□□□ -2.02
ACTN4O43707 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
ACTN4O43707 U8.2-201ENST00000363156 134 ntBASIC2.42□□□□□ -2.02
ACTN4O43707 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
ACTN4O43707 SNORA48.3-201ENST00000391081 134 ntBASIC2.42□□□□□ -2.02
ACTN4O43707 RNA5SP508-201ENST00000411327 119 ntBASIC2.42□□□□□ -2.02
ACTN4O43707 AC079804.2-201ENST00000490376 200 ntBASIC2.42□□□□□ -2.02
ACTN4O43707 RNU6-1265P-201ENST00000516342 103 ntBASIC2.42□□□□□ -2.02
ACTN4O43707 MIR125B2-201ENST00000385128 89 ntBASIC2.41□□□□□ -2.02
ACTN4O43707 RN7SL429P-201ENST00000479090 223 ntBASIC2.41□□□□□ -2.02
ACTN4O43707 RN7SL489P-201ENST00000486185 223 ntBASIC2.41□□□□□ -2.02
ACTN4O43707 RN7SL327P-201ENST00000488659 223 ntBASIC2.41□□□□□ -2.02
ACTN4O43707 RNU6-752P-201ENST00000516376 102 ntBASIC2.41□□□□□ -2.02
ACTN4O43707 RN7SL853P-201ENST00000617250 223 ntBASIC2.41□□□□□ -2.02
ACTN4O43707 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
ACTN4O43707 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
ACTN4O43707 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
ACTN4O43707 SNORA67.3-201ENST00000384366 140 ntBASIC2.4□□□□□ -2.03
ACTN4O43707 U3.27-201ENST00000391237 200 ntBASIC2.4□□□□□ -2.03
ACTN4O43707 SNORD23.1-201ENST00000408212 104 ntBASIC2.4□□□□□ -2.03
ACTN4O43707 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC2.4□□□□□ -2.03
ACTN4O43707 MIR4771-2-201ENST00000577758 74 ntBASIC2.4□□□□□ -2.03
ACTN4O43707 MIR3664-201ENST00000579074 99 ntBASIC2.4□□□□□ -2.03
ACTN4O43707 MIR4771-1-201ENST00000582617 74 ntBASIC2.4□□□□□ -2.03
ACTN4O43707 AL773524.1-201ENST00000614065 229 ntBASIC2.4□□□□□ -2.03
ACTN4O43707 AC245884.12-201ENST00000615364 59 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 229.2 ms