Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 AC138749.4-201ENST00000563970 127 ntBASIC1.26□□□□□ -2.21
PROM1O43490 MIR548Z-201ENST00000584743 97 ntBASIC1.26□□□□□ -2.21
PROM1O43490 MIR6078-201ENST00000611069 100 ntBASIC1.26□□□□□ -2.21
PROM1O43490 MIR2052-201ENST00000636055 55 ntBASIC1.26□□□□□ -2.21
PROM1O43490 AC008163.1-202ENST00000636004 2889 ntBASIC1.26□□□□□ -2.21
PROM1O43490 Y_RNA.95-201ENST00000363079 95 ntBASIC1.25□□□□□ -2.21
PROM1O43490 RNY1P2-201ENST00000364820 117 ntBASIC1.25□□□□□ -2.21
PROM1O43490 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.25□□□□□ -2.21
PROM1O43490 SNORD111-201ENST00000408139 94 ntBASIC1.25□□□□□ -2.21
PROM1O43490 MIR1257-201ENST00000408490 117 ntBASIC1.25□□□□□ -2.21
PROM1O43490 AC004941.2-201ENST00000427009 228 ntBASIC1.25□□□□□ -2.21
PROM1O43490 AC109327.2-201ENST00000448339 378 ntBASIC1.25□□□□□ -2.21
PROM1O43490 RNU7-61P-201ENST00000515897 61 ntBASIC1.25□□□□□ -2.21
PROM1O43490 SNORD79.1-201ENST00000516069 84 ntBASIC1.25□□□□□ -2.21
PROM1O43490 RNU6-1006P-201ENST00000516998 103 ntBASIC1.25□□□□□ -2.21
PROM1O43490 MIR4771-2-201ENST00000577758 74 ntBASIC1.25□□□□□ -2.21
PROM1O43490 MIR4500-201ENST00000579472 76 ntBASIC1.25□□□□□ -2.21
PROM1O43490 MIR4771-1-201ENST00000582617 74 ntBASIC1.25□□□□□ -2.21
PROM1O43490 RNU1-36P-201ENST00000365130 165 ntBASIC1.24□□□□□ -2.21
PROM1O43490 Y_RNA.467-201ENST00000384297 102 ntBASIC1.24□□□□□ -2.21
PROM1O43490 RNU6-644P-201ENST00000391155 98 ntBASIC1.24□□□□□ -2.21
PROM1O43490 MIR548G-201ENST00000408442 89 ntBASIC1.24□□□□□ -2.21
PROM1O43490 RNU7-185P-201ENST00000459215 60 ntBASIC1.24□□□□□ -2.21
PROM1O43490 AC090897.1-201ENST00000580909 226 ntBASIC1.24□□□□□ -2.21
PROM1O43490 RNU6-90P-201ENST00000606352 106 ntBASIC1.24□□□□□ -2.21
PROM1O43490 AC106800.4-201ENST00000614905 153 ntBASIC1.24□□□□□ -2.21
PROM1O43490 Y_RNA.119-201ENST00000363301 96 ntBASIC1.23□□□□□ -2.21
PROM1O43490 RNU6-1131P-201ENST00000364955 107 ntBASIC1.23□□□□□ -2.21
PROM1O43490 AC004223.1-201ENST00000479840 271 ntBASIC1.23□□□□□ -2.21
PROM1O43490 RNU6-158P-201ENST00000517104 100 ntBASIC1.23□□□□□ -2.21
PROM1O43490 AC068338.1-201ENST00000565567 176 ntBASIC1.23□□□□□ -2.21
PROM1O43490 MIR5582-201ENST00000579697 68 ntBASIC1.23□□□□□ -2.21
PROM1O43490 MIR4491-201ENST00000581087 68 ntBASIC1.23□□□□□ -2.21
PROM1O43490 RNU6-86P-201ENST00000606534 107 ntBASIC1.23□□□□□ -2.21
PROM1O43490 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.23□□□□□ -2.21
PROM1O43490 MIR6779-201ENST00000617283 64 ntBASIC1.23□□□□□ -2.21
PROM1O43490 MIR96-201ENST00000362288 78 ntBASIC1.22□□□□□ -2.21
PROM1O43490 Y_RNA.43-201ENST00000362670 111 ntBASIC1.22□□□□□ -2.21
PROM1O43490 RNU6-1255P-201ENST00000363434 112 ntBASIC1.22□□□□□ -2.21
PROM1O43490 RNU4-83P-201ENST00000410863 133 ntBASIC1.22□□□□□ -2.21
PROM1O43490 AC096949.1-201ENST00000412047 152 ntBASIC1.22□□□□□ -2.21
PROM1O43490 RNU6-162P-201ENST00000516228 103 ntBASIC1.22□□□□□ -2.21
PROM1O43490 RNU7-40P-201ENST00000516397 64 ntBASIC1.22□□□□□ -2.21
PROM1O43490 MIR4777-201ENST00000583710 86 ntBASIC1.22□□□□□ -2.21
PROM1O43490 MIR6515-201ENST00000619843 57 ntBASIC1.22□□□□□ -2.21
PROM1O43490 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
PROM1O43490 RNA5SP325-201ENST00000363756 130 ntBASIC1.21□□□□□ -2.22
PROM1O43490 Y_RNA.567-201ENST00000384736 106 ntBASIC1.21□□□□□ -2.22
PROM1O43490 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
PROM1O43490 SNORA40.6-201ENST00000391153 128 ntBASIC1.21□□□□□ -2.22
PROM1O43490 RNU6-531P-201ENST00000516694 104 ntBASIC1.21□□□□□ -2.22
PROM1O43490 SNORA25.16-201ENST00000516741 121 ntBASIC1.21□□□□□ -2.22
PROM1O43490 MIR3660-201ENST00000584845 100 ntBASIC1.21□□□□□ -2.22
PROM1O43490 AC022709.1-201ENST00000615967 87 ntBASIC1.21□□□□□ -2.22
PROM1O43490 MALAT1.1-201ENST00000618249 95 ntBASIC1.21□□□□□ -2.22
PROM1O43490 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
PROM1O43490 Y_RNA.96-201ENST00000363092 109 ntBASIC1.2□□□□□ -2.22
PROM1O43490 RNU4-58P-201ENST00000363192 141 ntBASIC1.2□□□□□ -2.22
PROM1O43490 RNU1-124P-201ENST00000363861 145 ntBASIC1.2□□□□□ -2.22
PROM1O43490 Y_RNA.220-201ENST00000364244 109 ntBASIC1.2□□□□□ -2.22
PROM1O43490 MIR488-201ENST00000365739 83 ntBASIC1.2□□□□□ -2.22
PROM1O43490 SNORA25-201ENST00000384384 134 ntBASIC1.2□□□□□ -2.22
PROM1O43490 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
PROM1O43490 BX276092.1-201ENST00000427368 251 ntBASIC1.2□□□□□ -2.22
PROM1O43490 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.2□□□□□ -2.22
PROM1O43490 Y_RNA.705-201ENST00000516862 110 ntBASIC1.2□□□□□ -2.22
PROM1O43490 MIR4439-201ENST00000583746 80 ntBASIC1.2□□□□□ -2.22
PROM1O43490 AC006254.2-201ENST00000603259 279 ntBASIC1.2□□□□□ -2.22
PROM1O43490 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.2□□□□□ -2.22
PROM1O43490 AC027335.2-201ENST00000624030 375 ntBASIC1.2□□□□□ -2.22
PROM1O43490 RNU6-1163P-201ENST00000364516 107 ntBASIC1.19□□□□□ -2.22
PROM1O43490 Y_RNA.342-201ENST00000365352 113 ntBASIC1.19□□□□□ -2.22
PROM1O43490 RNU6-813P-201ENST00000384691 107 ntBASIC1.19□□□□□ -2.22
PROM1O43490 MIR100-201ENST00000385259 80 ntBASIC1.19□□□□□ -2.22
PROM1O43490 Y_RNA.588-201ENST00000391254 102 ntBASIC1.19□□□□□ -2.22
PROM1O43490 RPS26P5-201ENST00000418544 335 ntBASIC1.19□□□□□ -2.22
PROM1O43490 AC067940.1-201ENST00000458411 300 ntBASIC1.19□□□□□ -2.22
PROM1O43490 RNA5SP404-201ENST00000517118 132 ntBASIC1.19□□□□□ -2.22
PROM1O43490 AC020891.4-201ENST00000605745 93 ntBASIC1.19□□□□□ -2.22
PROM1O43490 U7.3-201ENST00000616123 62 ntBASIC1.19□□□□□ -2.22
PROM1O43490 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.19□□□□□ -2.22
PROM1O43490 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.19□□□□□ -2.22
PROM1O43490 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
PROM1O43490 Y_RNA.13-201ENST00000362403 112 ntBASIC1.18□□□□□ -2.22
PROM1O43490 RNU1-93P-201ENST00000364704 169 ntBASIC1.18□□□□□ -2.22
PROM1O43490 RNY1P7-201ENST00000384743 110 ntBASIC1.18□□□□□ -2.22
PROM1O43490 SNORD12-201ENST00000391002 90 ntBASIC1.18□□□□□ -2.22
PROM1O43490 AC002429.1-201ENST00000437672 148 ntBASIC1.18□□□□□ -2.22
PROM1O43490 RNU6-977P-201ENST00000516411 103 ntBASIC1.18□□□□□ -2.22
PROM1O43490 MIR4676-201ENST00000583078 72 ntBASIC1.18□□□□□ -2.22
PROM1O43490 AC103810.7-201ENST00000607821 91 ntBASIC1.18□□□□□ -2.22
PROM1O43490 HSBP1P2-201ENST00000299671 229 ntBASIC1.17□□□□□ -2.22
PROM1O43490 MIR101-2-201ENST00000362195 79 ntBASIC1.17□□□□□ -2.22
PROM1O43490 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
PROM1O43490 RNU6-49P-201ENST00000384256 107 ntBASIC1.17□□□□□ -2.22
PROM1O43490 RNU6-364P-201ENST00000384387 107 ntBASIC1.17□□□□□ -2.22
PROM1O43490 MIR598-201ENST00000384868 97 ntBASIC1.17□□□□□ -2.22
PROM1O43490 MIR125B2-201ENST00000385128 89 ntBASIC1.17□□□□□ -2.22
PROM1O43490 RNU6-972P-201ENST00000391208 107 ntBASIC1.17□□□□□ -2.22
PROM1O43490 RNU6-887P-201ENST00000410660 100 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 171.4 ms