Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 MIR147A-201ENST00000385079 72 ntBASIC-1.08□□□□□ -2.58
TRAV1-1A0A0B4J248 Y_RNA.581-201ENST00000391017 97 ntBASIC-1.08□□□□□ -2.58
TRAV1-1A0A0B4J248 MIR1468-201ENST00000410600 86 ntBASIC-1.08□□□□□ -2.58
TRAV1-1A0A0B4J248 AL353813.1-201ENST00000440700 253 ntBASIC-1.08□□□□□ -2.58
TRAV1-1A0A0B4J248 AC113139.1-201ENST00000605049 239 ntBASIC-1.08□□□□□ -2.58
TRAV1-1A0A0B4J248 RNU2-4P-201ENST00000606190 192 ntBASIC-1.08□□□□□ -2.58
TRAV1-1A0A0B4J248 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-1.08□□□□□ -2.58
TRAV1-1A0A0B4J248 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-1.09□□□□□ -2.58
TRAV1-1A0A0B4J248 SNORA25.1-201ENST00000362326 128 ntBASIC-1.09□□□□□ -2.58
TRAV1-1A0A0B4J248 RNA5SP192-201ENST00000364404 120 ntBASIC-1.09□□□□□ -2.58
TRAV1-1A0A0B4J248 Y_RNA.252-201ENST00000364556 101 ntBASIC-1.09□□□□□ -2.58
TRAV1-1A0A0B4J248 Y_RNA.279-201ENST00000364763 95 ntBASIC-1.09□□□□□ -2.58
TRAV1-1A0A0B4J248 Y_RNA.445-201ENST00000384168 102 ntBASIC-1.09□□□□□ -2.58
TRAV1-1A0A0B4J248 RNU6-559P-201ENST00000516151 98 ntBASIC-1.09□□□□□ -2.58
TRAV1-1A0A0B4J248 RNU6-720P-201ENST00000516363 108 ntBASIC-1.09□□□□□ -2.58
TRAV1-1A0A0B4J248 MIR3115-201ENST00000577915 68 ntBASIC-1.09□□□□□ -2.58
TRAV1-1A0A0B4J248 Y_RNA.31-201ENST00000362574 102 ntBASIC-1.1□□□□□ -2.59
TRAV1-1A0A0B4J248 Y_RNA.52-201ENST00000362760 96 ntBASIC-1.1□□□□□ -2.59
TRAV1-1A0A0B4J248 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.1□□□□□ -2.59
TRAV1-1A0A0B4J248 RNU6-24P-201ENST00000384440 107 ntBASIC-1.1□□□□□ -2.59
TRAV1-1A0A0B4J248 SNORD116-29-201ENST00000384516 83 ntBASIC-1.1□□□□□ -2.59
TRAV1-1A0A0B4J248 MIR624-201ENST00000385217 97 ntBASIC-1.1□□□□□ -2.59
TRAV1-1A0A0B4J248 RNU6-121P-201ENST00000410525 99 ntBASIC-1.1□□□□□ -2.59
TRAV1-1A0A0B4J248 RNU4-43P-201ENST00000410628 137 ntBASIC-1.1□□□□□ -2.59
TRAV1-1A0A0B4J248 SERF1AP1-201ENST00000514575 187 ntBASIC-1.1□□□□□ -2.59
TRAV1-1A0A0B4J248 RNU7-2P-201ENST00000516096 62 ntBASIC-1.1□□□□□ -2.59
TRAV1-1A0A0B4J248 RNA5SP461-201ENST00000516451 104 ntBASIC-1.1□□□□□ -2.59
TRAV1-1A0A0B4J248 AC092794.1-201ENST00000612734 582 ntBASIC-1.1□□□□□ -2.59
TRAV1-1A0A0B4J248 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-1.1□□□□□ -2.59
TRAV1-1A0A0B4J248 AC112487.2-201ENST00000637950 304 ntBASIC-1.1□□□□□ -2.59
TRAV1-1A0A0B4J248 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.11□□□□□ -2.59
TRAV1-1A0A0B4J248 Y_RNA.117-201ENST00000363294 101 ntBASIC-1.11□□□□□ -2.59
TRAV1-1A0A0B4J248 Y_RNA.183-201ENST00000363882 113 ntBASIC-1.11□□□□□ -2.59
TRAV1-1A0A0B4J248 SNORD74.6-201ENST00000364796 70 ntBASIC-1.11□□□□□ -2.59
TRAV1-1A0A0B4J248 RNU6-290P-201ENST00000365212 101 ntBASIC-1.11□□□□□ -2.59
TRAV1-1A0A0B4J248 RNU6-472P-201ENST00000384299 107 ntBASIC-1.11□□□□□ -2.59
TRAV1-1A0A0B4J248 Y_RNA.521-201ENST00000384560 114 ntBASIC-1.11□□□□□ -2.59
TRAV1-1A0A0B4J248 Y_RNA.596-201ENST00000410462 109 ntBASIC-1.11□□□□□ -2.59
TRAV1-1A0A0B4J248 RNU4-69P-201ENST00000410677 143 ntBASIC-1.11□□□□□ -2.59
TRAV1-1A0A0B4J248 RNU6-592P-201ENST00000411333 103 ntBASIC-1.11□□□□□ -2.59
TRAV1-1A0A0B4J248 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-1.11□□□□□ -2.59
TRAV1-1A0A0B4J248 RNU4-24P-201ENST00000364565 139 ntBASIC-1.12□□□□□ -2.59
TRAV1-1A0A0B4J248 RNU6-690P-201ENST00000365242 106 ntBASIC-1.12□□□□□ -2.59
TRAV1-1A0A0B4J248 Y_RNA.357-201ENST00000365487 109 ntBASIC-1.12□□□□□ -2.59
TRAV1-1A0A0B4J248 RNU6-54P-201ENST00000365563 107 ntBASIC-1.12□□□□□ -2.59
TRAV1-1A0A0B4J248 Y_RNA.516-201ENST00000384541 124 ntBASIC-1.12□□□□□ -2.59
TRAV1-1A0A0B4J248 MIR34C-201ENST00000384831 77 ntBASIC-1.12□□□□□ -2.59
TRAV1-1A0A0B4J248 MIR601-201ENST00000385256 79 ntBASIC-1.12□□□□□ -2.59
TRAV1-1A0A0B4J248 RNY4P36-201ENST00000391116 96 ntBASIC-1.12□□□□□ -2.59
TRAV1-1A0A0B4J248 Y_RNA.601-201ENST00000410500 113 ntBASIC-1.12□□□□□ -2.59
TRAV1-1A0A0B4J248 SNORD18.2-201ENST00000459604 70 ntBASIC-1.12□□□□□ -2.59
TRAV1-1A0A0B4J248 RNU6-718P-201ENST00000516166 105 ntBASIC-1.12□□□□□ -2.59
TRAV1-1A0A0B4J248 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-1.12□□□□□ -2.59
TRAV1-1A0A0B4J248 AC084782.3-201ENST00000612282 578 ntBASIC-1.12□□□□□ -2.59
TRAV1-1A0A0B4J248 MIR548O2-201ENST00000616090 70 ntBASIC-1.12□□□□□ -2.59
TRAV1-1A0A0B4J248 Y_RNA.3-201ENST00000362331 103 ntBASIC-1.13□□□□□ -2.59
TRAV1-1A0A0B4J248 Y_RNA.16-201ENST00000362421 102 ntBASIC-1.13□□□□□ -2.59
TRAV1-1A0A0B4J248 snoU2_19.2-201ENST00000363024 80 ntBASIC-1.13□□□□□ -2.59
TRAV1-1A0A0B4J248 Y_RNA.154-201ENST00000363624 102 ntBASIC-1.13□□□□□ -2.59
TRAV1-1A0A0B4J248 SNORD114-17-201ENST00000364699 75 ntBASIC-1.13□□□□□ -2.59
TRAV1-1A0A0B4J248 RNU6-616P-201ENST00000384353 107 ntBASIC-1.13□□□□□ -2.59
TRAV1-1A0A0B4J248 MIR548F1-201ENST00000408667 84 ntBASIC-1.13□□□□□ -2.59
TRAV1-1A0A0B4J248 RNU7-152P-201ENST00000458982 64 ntBASIC-1.13□□□□□ -2.59
TRAV1-1A0A0B4J248 RNU7-123P-201ENST00000515911 60 ntBASIC-1.13□□□□□ -2.59
TRAV1-1A0A0B4J248 SNORD116-25-201ENST00000516517 92 ntBASIC-1.13□□□□□ -2.59
TRAV1-1A0A0B4J248 AL442663.2-201ENST00000554385 511 ntBASIC-1.13□□□□□ -2.59
TRAV1-1A0A0B4J248 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-1.13□□□□□ -2.59
TRAV1-1A0A0B4J248 Y_RNA.5-201ENST00000362334 102 ntBASIC-1.14□□□□□ -2.59
TRAV1-1A0A0B4J248 Y_RNA.64-201ENST00000362845 102 ntBASIC-1.14□□□□□ -2.59
TRAV1-1A0A0B4J248 Y_RNA.76-201ENST00000362931 109 ntBASIC-1.14□□□□□ -2.59
TRAV1-1A0A0B4J248 RNU6-957P-201ENST00000363652 99 ntBASIC-1.14□□□□□ -2.59
TRAV1-1A0A0B4J248 Y_RNA.187-201ENST00000363918 113 ntBASIC-1.14□□□□□ -2.59
TRAV1-1A0A0B4J248 Y_RNA.353-201ENST00000365440 108 ntBASIC-1.14□□□□□ -2.59
TRAV1-1A0A0B4J248 RNU6-1289P-201ENST00000384431 106 ntBASIC-1.14□□□□□ -2.59
TRAV1-1A0A0B4J248 SNORA79-201ENST00000408376 140 ntBASIC-1.14□□□□□ -2.59
TRAV1-1A0A0B4J248 RNU6-651P-201ENST00000411040 105 ntBASIC-1.14□□□□□ -2.59
TRAV1-1A0A0B4J248 RNU6-240P-201ENST00000516098 97 ntBASIC-1.14□□□□□ -2.59
TRAV1-1A0A0B4J248 RNA5SP236-201ENST00000516169 116 ntBASIC-1.14□□□□□ -2.59
TRAV1-1A0A0B4J248 Y_RNA.718-201ENST00000517110 102 ntBASIC-1.14□□□□□ -2.59
TRAV1-1A0A0B4J248 MIR3165-201ENST00000579874 75 ntBASIC-1.14□□□□□ -2.59
TRAV1-1A0A0B4J248 SNORD36A-201ENST00000362874 73 ntBASIC-1.15□□□□□ -2.59
TRAV1-1A0A0B4J248 Y_RNA.259-201ENST00000364619 101 ntBASIC-1.15□□□□□ -2.59
TRAV1-1A0A0B4J248 RNU6-728P-201ENST00000365375 104 ntBASIC-1.15□□□□□ -2.59
TRAV1-1A0A0B4J248 Y_RNA.360-201ENST00000365512 102 ntBASIC-1.15□□□□□ -2.59
TRAV1-1A0A0B4J248 MIR124-2-201ENST00000385081 109 ntBASIC-1.15□□□□□ -2.59
TRAV1-1A0A0B4J248 RNU6-381P-201ENST00000391259 108 ntBASIC-1.15□□□□□ -2.59
TRAV1-1A0A0B4J248 AC138393.2-201ENST00000414742 246 ntBASIC-1.15□□□□□ -2.59
TRAV1-1A0A0B4J248 MIR6773-201ENST00000612812 74 ntBASIC-1.15□□□□□ -2.59
TRAV1-1A0A0B4J248 SNORD27-201ENST00000363981 72 ntBASIC-1.16□□□□□ -2.6
TRAV1-1A0A0B4J248 SNORD115-23-201ENST00000364461 82 ntBASIC-1.16□□□□□ -2.6
TRAV1-1A0A0B4J248 SNORA63.7-201ENST00000365579 123 ntBASIC-1.16□□□□□ -2.6
TRAV1-1A0A0B4J248 RNU6-337P-201ENST00000391243 106 ntBASIC-1.16□□□□□ -2.6
TRAV1-1A0A0B4J248 RNU6-1254P-201ENST00000391266 104 ntBASIC-1.16□□□□□ -2.6
TRAV1-1A0A0B4J248 MIR1302-11-201ENST00000408051 138 ntBASIC-1.16□□□□□ -2.6
TRAV1-1A0A0B4J248 MIR1302-9-201ENST00000408365 138 ntBASIC-1.16□□□□□ -2.6
TRAV1-1A0A0B4J248 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-1.16□□□□□ -2.6
TRAV1-1A0A0B4J248 MIR1302-10-201ENST00000408734 138 ntBASIC-1.16□□□□□ -2.6
TRAV1-1A0A0B4J248 SNORD42B-201ENST00000458893 67 ntBASIC-1.16□□□□□ -2.6
TRAV1-1A0A0B4J248 RNU7-164P-201ENST00000459221 62 ntBASIC-1.16□□□□□ -2.6
TRAV1-1A0A0B4J248 RN7SKP19-201ENST00000516016 252 ntBASIC-1.16□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms