Protein–RNA interactions for Protein: Q9Y6H5

SNCAIP, Synphilin-1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIPQ9Y6H5 SEPT14P17-201ENST00000617978 177 ntBASIC1.93□□□□□ -2.1
SNCAIPQ9Y6H5 Y_RNA.17-201ENST00000362433 111 ntBASIC1.92□□□□□ -2.1
SNCAIPQ9Y6H5 RNU1-42P-201ENST00000364033 160 ntBASIC1.92□□□□□ -2.1
SNCAIPQ9Y6H5 MIR563-201ENST00000385080 79 ntBASIC1.92□□□□□ -2.1
SNCAIPQ9Y6H5 RNU6-1165P-201ENST00000410119 107 ntBASIC1.92□□□□□ -2.1
SNCAIPQ9Y6H5 RPL30P7-201ENST00000479312 323 ntBASIC1.92□□□□□ -2.1
SNCAIPQ9Y6H5 AP003716.2-201ENST00000528260 108 ntBASIC1.92□□□□□ -2.1
SNCAIPQ9Y6H5 MIR3664-201ENST00000579074 99 ntBASIC1.92□□□□□ -2.1
SNCAIPQ9Y6H5 SNORA4-201ENST00000584302 138 ntBASIC1.92□□□□□ -2.1
SNCAIPQ9Y6H5 AC012676.2-201ENST00000619258 186 ntBASIC1.92□□□□□ -2.1
SNCAIPQ9Y6H5 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.91□□□□□ -2.1
SNCAIPQ9Y6H5 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
SNCAIPQ9Y6H5 RNU6-654P-201ENST00000364373 107 ntBASIC1.91□□□□□ -2.1
SNCAIPQ9Y6H5 RNU6-392P-201ENST00000364926 101 ntBASIC1.91□□□□□ -2.1
SNCAIPQ9Y6H5 MT-TN-201ENST00000387400 73 ntBASIC1.91□□□□□ -2.1
SNCAIPQ9Y6H5 RNA5SP95-201ENST00000410319 137 ntBASIC1.91□□□□□ -2.1
SNCAIPQ9Y6H5 RNU1-98P-201ENST00000458992 160 ntBASIC1.91□□□□□ -2.1
SNCAIPQ9Y6H5 RNU11-2P-201ENST00000516898 142 ntBASIC1.91□□□□□ -2.1
SNCAIPQ9Y6H5 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.91□□□□□ -2.1
SNCAIPQ9Y6H5 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
SNCAIPQ9Y6H5 MIR30D-201ENST00000362283 70 ntBASIC1.9□□□□□ -2.11
SNCAIPQ9Y6H5 Y_RNA.327-201ENST00000365201 102 ntBASIC1.9□□□□□ -2.11
SNCAIPQ9Y6H5 SNORD58A-201ENST00000383875 65 ntBASIC1.9□□□□□ -2.11
SNCAIPQ9Y6H5 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.9□□□□□ -2.11
SNCAIPQ9Y6H5 AC012493.3-201ENST00000604494 112 ntBASIC1.9□□□□□ -2.11
SNCAIPQ9Y6H5 RNY1P2-201ENST00000364820 117 ntBASIC1.89□□□□□ -2.11
SNCAIPQ9Y6H5 RNU6-820P-201ENST00000384273 107 ntBASIC1.89□□□□□ -2.11
SNCAIPQ9Y6H5 Y_RNA.593-201ENST00000410292 98 ntBASIC1.89□□□□□ -2.11
SNCAIPQ9Y6H5 AC245517.4-201ENST00000448601 281 ntBASIC1.89□□□□□ -2.11
SNCAIPQ9Y6H5 RN7SKP12-201ENST00000516275 143 ntBASIC1.89□□□□□ -2.11
SNCAIPQ9Y6H5 RNU6-165P-201ENST00000517170 99 ntBASIC1.89□□□□□ -2.11
SNCAIPQ9Y6H5 AL512310.8-201ENST00000550183 120 ntBASIC1.89□□□□□ -2.11
SNCAIPQ9Y6H5 SNORD53B-201ENST00000577887 78 ntBASIC1.89□□□□□ -2.11
SNCAIPQ9Y6H5 MIR4500-201ENST00000579472 76 ntBASIC1.89□□□□□ -2.11
SNCAIPQ9Y6H5 IGLL4P-201ENST00000614590 133 ntBASIC1.89□□□□□ -2.11
SNCAIPQ9Y6H5 U6.109-201ENST00000636749 87 ntBASIC1.89□□□□□ -2.11
SNCAIPQ9Y6H5 Y_RNA.168-201ENST00000363740 102 ntBASIC1.88□□□□□ -2.11
SNCAIPQ9Y6H5 MIR1276-201ENST00000408707 83 ntBASIC1.88□□□□□ -2.11
SNCAIPQ9Y6H5 RNU6-613P-201ENST00000410412 108 ntBASIC1.88□□□□□ -2.11
SNCAIPQ9Y6H5 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.88□□□□□ -2.11
SNCAIPQ9Y6H5 uc_338.6-201ENST00000613544 171 ntBASIC1.88□□□□□ -2.11
SNCAIPQ9Y6H5 SNORD116-10-201ENST00000363791 102 ntBASIC1.87□□□□□ -2.11
SNCAIPQ9Y6H5 RNY1P1-201ENST00000364372 112 ntBASIC1.87□□□□□ -2.11
SNCAIPQ9Y6H5 RNA5SP173-201ENST00000364857 136 ntBASIC1.87□□□□□ -2.11
SNCAIPQ9Y6H5 SNORD48-201ENST00000364953 64 ntBASIC1.87□□□□□ -2.11
SNCAIPQ9Y6H5 SNORD116-22-201ENST00000384430 92 ntBASIC1.87□□□□□ -2.11
SNCAIPQ9Y6H5 MIR489-201ENST00000384923 84 ntBASIC1.87□□□□□ -2.11
SNCAIPQ9Y6H5 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
SNCAIPQ9Y6H5 MIR1323-201ENST00000408090 73 ntBASIC1.87□□□□□ -2.11
SNCAIPQ9Y6H5 AC138749.4-201ENST00000563970 127 ntBASIC1.87□□□□□ -2.11
SNCAIPQ9Y6H5 AC090897.1-201ENST00000580909 226 ntBASIC1.87□□□□□ -2.11
SNCAIPQ9Y6H5 MIR4285-201ENST00000581001 85 ntBASIC1.87□□□□□ -2.11
SNCAIPQ9Y6H5 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.87□□□□□ -2.11
SNCAIPQ9Y6H5 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
SNCAIPQ9Y6H5 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
SNCAIPQ9Y6H5 RNA5SP133-201ENST00000363368 119 ntBASIC1.86□□□□□ -2.11
SNCAIPQ9Y6H5 RNU6-1244P-201ENST00000363614 108 ntBASIC1.86□□□□□ -2.11
SNCAIPQ9Y6H5 Y_RNA.173-201ENST00000363776 113 ntBASIC1.86□□□□□ -2.11
SNCAIPQ9Y6H5 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.86□□□□□ -2.11
SNCAIPQ9Y6H5 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
SNCAIPQ9Y6H5 Y_RNA.330-201ENST00000365230 109 ntBASIC1.85□□□□□ -2.11
SNCAIPQ9Y6H5 MIR518E-201ENST00000385252 88 ntBASIC1.85□□□□□ -2.11
SNCAIPQ9Y6H5 MT-TF-201ENST00000387314 71 ntBASIC1.85□□□□□ -2.11
SNCAIPQ9Y6H5 RNU1-78P-201ENST00000391248 165 ntBASIC1.85□□□□□ -2.11
SNCAIPQ9Y6H5 RN7SKP88-201ENST00000516847 250 ntBASIC1.85□□□□□ -2.11
SNCAIPQ9Y6H5 MIR4422-201ENST00000581938 83 ntBASIC1.85□□□□□ -2.11
SNCAIPQ9Y6H5 7SK.8-201ENST00000612110 250 ntBASIC1.85□□□□□ -2.11
SNCAIPQ9Y6H5 7SK.11-201ENST00000615477 250 ntBASIC1.85□□□□□ -2.11
SNCAIPQ9Y6H5 7SK.13-201ENST00000622040 250 ntBASIC1.85□□□□□ -2.11
SNCAIPQ9Y6H5 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.85□□□□□ -2.11
SNCAIPQ9Y6H5 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
SNCAIPQ9Y6H5 MIR377-201ENST00000362145 69 ntBASIC1.84□□□□□ -2.11
SNCAIPQ9Y6H5 Y_RNA.119-201ENST00000363301 96 ntBASIC1.84□□□□□ -2.11
SNCAIPQ9Y6H5 RNU6-573P-201ENST00000383938 106 ntBASIC1.84□□□□□ -2.11
SNCAIPQ9Y6H5 SNORA2B-201ENST00000384583 137 ntBASIC1.84□□□□□ -2.11
SNCAIPQ9Y6H5 MIR181B2-201ENST00000385004 89 ntBASIC1.84□□□□□ -2.11
SNCAIPQ9Y6H5 SNORA67.6-201ENST00000391093 99 ntBASIC1.84□□□□□ -2.11
SNCAIPQ9Y6H5 SNORD93-201ENST00000408813 74 ntBASIC1.84□□□□□ -2.11
SNCAIPQ9Y6H5 RNU6-402P-201ENST00000410678 103 ntBASIC1.84□□□□□ -2.11
SNCAIPQ9Y6H5 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.84□□□□□ -2.11
SNCAIPQ9Y6H5 AC048334.1-201ENST00000477975 159 ntBASIC1.84□□□□□ -2.11
SNCAIPQ9Y6H5 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.84□□□□□ -2.11
SNCAIPQ9Y6H5 RNU6-1125P-201ENST00000363601 107 ntBASIC1.83□□□□□ -2.12
SNCAIPQ9Y6H5 SNORA7.1-201ENST00000363750 139 ntBASIC1.83□□□□□ -2.12
SNCAIPQ9Y6H5 RNU6-480P-201ENST00000384332 107 ntBASIC1.83□□□□□ -2.12
SNCAIPQ9Y6H5 RPS27P16-201ENST00000425758 201 ntBASIC1.83□□□□□ -2.12
SNCAIPQ9Y6H5 AC024614.2-201ENST00000577584 372 ntBASIC1.83□□□□□ -2.12
SNCAIPQ9Y6H5 MIR4421-201ENST00000578133 69 ntBASIC1.83□□□□□ -2.12
SNCAIPQ9Y6H5 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.83□□□□□ -2.12
SNCAIPQ9Y6H5 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.82□□□□□ -2.12
SNCAIPQ9Y6H5 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.82□□□□□ -2.12
SNCAIPQ9Y6H5 HSBP1P2-201ENST00000299671 229 ntBASIC1.82□□□□□ -2.12
SNCAIPQ9Y6H5 RNU6-580P-201ENST00000365159 107 ntBASIC1.82□□□□□ -2.12
SNCAIPQ9Y6H5 RNY1P4-201ENST00000384595 115 ntBASIC1.82□□□□□ -2.12
SNCAIPQ9Y6H5 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.82□□□□□ -2.12
SNCAIPQ9Y6H5 RNU6-592P-201ENST00000411333 103 ntBASIC1.82□□□□□ -2.12
SNCAIPQ9Y6H5 Y_RNA.224-201ENST00000364308 111 ntBASIC1.81□□□□□ -2.12
SNCAIPQ9Y6H5 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
SNCAIPQ9Y6H5 MIR18B-201ENST00000454574 71 ntBASIC1.81□□□□□ -2.12
SNCAIPQ9Y6H5 RNU6-267P-201ENST00000516714 103 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 7.8 ms