Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 RNU7-171P-201ENST00000459581 62 ntBASIC2.06□□□□□ -2.08
FNDC3AQ9Y2H6 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.06□□□□□ -2.08
FNDC3AQ9Y2H6 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.06□□□□□ -2.08
FNDC3AQ9Y2H6 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.06□□□□□ -2.08
FNDC3AQ9Y2H6 MIR8066-201ENST00000617280 78 ntBASIC2.06□□□□□ -2.08
FNDC3AQ9Y2H6 AC006160.2-201ENST00000637708 154 ntBASIC2.06□□□□□ -2.08
FNDC3AQ9Y2H6 AP000553.5-201ENST00000641933 54 ntBASIC2.06□□□□□ -2.08
FNDC3AQ9Y2H6 RNU1-17P-201ENST00000363022 152 ntBASIC2.05□□□□□ -2.08
FNDC3AQ9Y2H6 Y_RNA.426-201ENST00000384068 113 ntBASIC2.05□□□□□ -2.08
FNDC3AQ9Y2H6 snoU13.21-201ENST00000459368 105 ntBASIC2.05□□□□□ -2.08
FNDC3AQ9Y2H6 AC023790.1-201ENST00000482174 347 ntBASIC2.05□□□□□ -2.08
FNDC3AQ9Y2H6 MIR4491-201ENST00000581087 68 ntBASIC2.05□□□□□ -2.08
FNDC3AQ9Y2H6 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
FNDC3AQ9Y2H6 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
FNDC3AQ9Y2H6 MIR377-201ENST00000362145 69 ntBASIC2.04□□□□□ -2.08
FNDC3AQ9Y2H6 SNORD33-201ENST00000362761 85 ntBASIC2.04□□□□□ -2.08
FNDC3AQ9Y2H6 Y_RNA.164-201ENST00000363709 102 ntBASIC2.04□□□□□ -2.08
FNDC3AQ9Y2H6 MIR583-201ENST00000384846 75 ntBASIC2.04□□□□□ -2.08
FNDC3AQ9Y2H6 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.04□□□□□ -2.08
FNDC3AQ9Y2H6 SNORD93-201ENST00000408813 74 ntBASIC2.04□□□□□ -2.08
FNDC3AQ9Y2H6 AL161932.1-201ENST00000437408 146 ntBASIC2.04□□□□□ -2.08
FNDC3AQ9Y2H6 RNU6-531P-201ENST00000516694 104 ntBASIC2.04□□□□□ -2.08
FNDC3AQ9Y2H6 SNORA25.16-201ENST00000516741 121 ntBASIC2.04□□□□□ -2.08
FNDC3AQ9Y2H6 AL512310.8-201ENST00000550183 120 ntBASIC2.04□□□□□ -2.08
FNDC3AQ9Y2H6 RNU6-580P-201ENST00000365159 107 ntBASIC2.03□□□□□ -2.08
FNDC3AQ9Y2H6 Y_RNA.330-201ENST00000365230 109 ntBASIC2.03□□□□□ -2.08
FNDC3AQ9Y2H6 MIR144-201ENST00000384886 86 ntBASIC2.03□□□□□ -2.08
FNDC3AQ9Y2H6 RNU6-519P-201ENST00000410590 108 ntBASIC2.03□□□□□ -2.08
FNDC3AQ9Y2H6 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.03□□□□□ -2.08
FNDC3AQ9Y2H6 MIR4666B-201ENST00000578142 81 ntBASIC2.03□□□□□ -2.08
FNDC3AQ9Y2H6 MIR5694-201ENST00000581190 76 ntBASIC2.03□□□□□ -2.08
FNDC3AQ9Y2H6 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.02□□□□□ -2.09
FNDC3AQ9Y2H6 SNORA72.6-201ENST00000384520 129 ntBASIC2.02□□□□□ -2.09
FNDC3AQ9Y2H6 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
FNDC3AQ9Y2H6 RNU6-717P-201ENST00000459076 104 ntBASIC2.02□□□□□ -2.09
FNDC3AQ9Y2H6 AC048334.1-201ENST00000477975 159 ntBASIC2.02□□□□□ -2.09
FNDC3AQ9Y2H6 RNU1-40P-201ENST00000516816 164 ntBASIC2.02□□□□□ -2.09
FNDC3AQ9Y2H6 RNU1-97P-201ENST00000516872 164 ntBASIC2.02□□□□□ -2.09
FNDC3AQ9Y2H6 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
FNDC3AQ9Y2H6 RNU6-403P-201ENST00000363163 104 ntBASIC2.01□□□□□ -2.09
FNDC3AQ9Y2H6 RNU6-571P-201ENST00000384128 107 ntBASIC2.01□□□□□ -2.09
FNDC3AQ9Y2H6 RNU6-524P-201ENST00000384270 107 ntBASIC2.01□□□□□ -2.09
FNDC3AQ9Y2H6 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC2.01□□□□□ -2.09
FNDC3AQ9Y2H6 AC008163.1-202ENST00000636004 2889 ntBASIC2□□□□□ -2.09
FNDC3AQ9Y2H6 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2□□□□□ -2.09
FNDC3AQ9Y2H6 RNU1-36P-201ENST00000365130 165 ntBASIC2□□□□□ -2.09
FNDC3AQ9Y2H6 Y_RNA.588-201ENST00000391254 102 ntBASIC2□□□□□ -2.09
FNDC3AQ9Y2H6 AC087499.7-201ENST00000441958 109 ntBASIC2□□□□□ -2.09
FNDC3AQ9Y2H6 MIR18B-201ENST00000454574 71 ntBASIC2□□□□□ -2.09
FNDC3AQ9Y2H6 RNA5SP233-201ENST00000459153 113 ntBASIC2□□□□□ -2.09
FNDC3AQ9Y2H6 AC025033.1-201ENST00000463883 194 ntBASIC2□□□□□ -2.09
FNDC3AQ9Y2H6 AC090255.1-201ENST00000495779 349 ntBASIC2□□□□□ -2.09
FNDC3AQ9Y2H6 AC121758.2-201ENST00000553271 193 ntBASIC2□□□□□ -2.09
FNDC3AQ9Y2H6 5S_rRNA.15-201ENST00000611169 127 ntBASIC2□□□□□ -2.09
FNDC3AQ9Y2H6 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2□□□□□ -2.09
FNDC3AQ9Y2H6 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2□□□□□ -2.09
FNDC3AQ9Y2H6 ZNF355P-201ENST00000427301 3216 ntBASIC1.99□□□□□ -2.09
FNDC3AQ9Y2H6 RNA5SP37-201ENST00000365420 130 ntBASIC1.99□□□□□ -2.09
FNDC3AQ9Y2H6 RNU6-652P-201ENST00000365488 107 ntBASIC1.99□□□□□ -2.09
FNDC3AQ9Y2H6 MIR516A2-201ENST00000384888 90 ntBASIC1.99□□□□□ -2.09
FNDC3AQ9Y2H6 MIR516A1-201ENST00000385033 90 ntBASIC1.99□□□□□ -2.09
FNDC3AQ9Y2H6 SNORA40.18-201ENST00000391200 128 ntBASIC1.99□□□□□ -2.09
FNDC3AQ9Y2H6 RNA5SP338-201ENST00000410495 85 ntBASIC1.99□□□□□ -2.09
FNDC3AQ9Y2H6 SNORD83.1-201ENST00000411362 77 ntBASIC1.99□□□□□ -2.09
FNDC3AQ9Y2H6 RPS27P16-201ENST00000425758 201 ntBASIC1.99□□□□□ -2.09
FNDC3AQ9Y2H6 AC015818.7-201ENST00000428754 109 ntBASIC1.99□□□□□ -2.09
FNDC3AQ9Y2H6 RNA5SP395-201ENST00000516567 118 ntBASIC1.99□□□□□ -2.09
FNDC3AQ9Y2H6 AC023934.1-201ENST00000574529 2389 ntBASIC1.99□□□□□ -2.09
FNDC3AQ9Y2H6 MIR519C-201ENST00000385053 87 ntBASIC1.98□□□□□ -2.09
FNDC3AQ9Y2H6 RN7SKP88-201ENST00000516847 250 ntBASIC1.98□□□□□ -2.09
FNDC3AQ9Y2H6 MIR5089-201ENST00000580047 84 ntBASIC1.98□□□□□ -2.09
FNDC3AQ9Y2H6 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.98□□□□□ -2.09
FNDC3AQ9Y2H6 7SK.8-201ENST00000612110 250 ntBASIC1.98□□□□□ -2.09
FNDC3AQ9Y2H6 7SK.11-201ENST00000615477 250 ntBASIC1.98□□□□□ -2.09
FNDC3AQ9Y2H6 7SK.13-201ENST00000622040 250 ntBASIC1.98□□□□□ -2.09
FNDC3AQ9Y2H6 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.98□□□□□ -2.09
FNDC3AQ9Y2H6 AL359851.1-201ENST00000569460 4997 ntBASIC1.97□□□□□ -2.09
FNDC3AQ9Y2H6 AC108667.1-201ENST00000428618 249 ntBASIC1.97□□□□□ -2.09
FNDC3AQ9Y2H6 SNORD4B-201ENST00000459083 72 ntBASIC1.97□□□□□ -2.09
FNDC3AQ9Y2H6 RNU7-185P-201ENST00000459215 60 ntBASIC1.97□□□□□ -2.09
FNDC3AQ9Y2H6 MIR4498-201ENST00000577599 66 ntBASIC1.97□□□□□ -2.09
FNDC3AQ9Y2H6 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
FNDC3AQ9Y2H6 RNU4-58P-201ENST00000363192 141 ntBASIC1.96□□□□□ -2.1
FNDC3AQ9Y2H6 RNU4-32P-201ENST00000363404 141 ntBASIC1.96□□□□□ -2.1
FNDC3AQ9Y2H6 SNORA75.2-201ENST00000391138 150 ntBASIC1.96□□□□□ -2.1
FNDC3AQ9Y2H6 SNORA17.3-201ENST00000391159 129 ntBASIC1.96□□□□□ -2.1
FNDC3AQ9Y2H6 SNORA75.3-201ENST00000391231 150 ntBASIC1.96□□□□□ -2.1
FNDC3AQ9Y2H6 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.96□□□□□ -2.1
FNDC3AQ9Y2H6 RNU6-1054P-201ENST00000411293 104 ntBASIC1.96□□□□□ -2.1
FNDC3AQ9Y2H6 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.96□□□□□ -2.1
FNDC3AQ9Y2H6 RNU7-85P-201ENST00000458851 63 ntBASIC1.96□□□□□ -2.1
FNDC3AQ9Y2H6 SNORA31.2-201ENST00000516019 134 ntBASIC1.96□□□□□ -2.1
FNDC3AQ9Y2H6 RNU7-153P-201ENST00000516455 62 ntBASIC1.96□□□□□ -2.1
FNDC3AQ9Y2H6 MIR3198-2-201ENST00000577868 80 ntBASIC1.96□□□□□ -2.1
FNDC3AQ9Y2H6 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.95□□□□□ -2.1
FNDC3AQ9Y2H6 RNU6-53P-201ENST00000365367 106 ntBASIC1.95□□□□□ -2.1
FNDC3AQ9Y2H6 Y_RNA.363-201ENST00000365529 113 ntBASIC1.95□□□□□ -2.1
FNDC3AQ9Y2H6 RNU1-78P-201ENST00000391248 165 ntBASIC1.95□□□□□ -2.1
FNDC3AQ9Y2H6 Y_RNA.607-201ENST00000410597 98 ntBASIC1.95□□□□□ -2.1
FNDC3AQ9Y2H6 HMGN2P38-201ENST00000423806 265 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms