Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 MIR608-201ENST00000384820 100 ntBASIC1.02□□□□□ -2.25
MKS1Q9NXB0 RNU2-51P-201ENST00000410708 197 ntBASIC1.02□□□□□ -2.25
MKS1Q9NXB0 DEFB131E-201ENST00000532329 154 ntBASIC1.02□□□□□ -2.25
MKS1Q9NXB0 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.02□□□□□ -2.25
MKS1Q9NXB0 SNORD114-21-201ENST00000606412 72 ntBASIC1.02□□□□□ -2.25
MKS1Q9NXB0 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
MKS1Q9NXB0 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.01□□□□□ -2.25
MKS1Q9NXB0 RNU6-363P-201ENST00000362895 105 ntBASIC1.01□□□□□ -2.25
MKS1Q9NXB0 RNU6-865P-201ENST00000364772 107 ntBASIC1.01□□□□□ -2.25
MKS1Q9NXB0 Y_RNA.327-201ENST00000365201 102 ntBASIC1.01□□□□□ -2.25
MKS1Q9NXB0 MIR573-201ENST00000384964 99 ntBASIC1.01□□□□□ -2.25
MKS1Q9NXB0 ACA64.5-201ENST00000516207 127 ntBASIC1.01□□□□□ -2.25
MKS1Q9NXB0 RNU6-531P-201ENST00000516694 104 ntBASIC1.01□□□□□ -2.25
MKS1Q9NXB0 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.01□□□□□ -2.25
MKS1Q9NXB0 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
MKS1Q9NXB0 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1□□□□□ -2.25
MKS1Q9NXB0 RNU4-58P-201ENST00000363192 141 ntBASIC1□□□□□ -2.25
MKS1Q9NXB0 Y_RNA.119-201ENST00000363301 96 ntBASIC1□□□□□ -2.25
MKS1Q9NXB0 RNU4-67P-201ENST00000364569 141 ntBASIC1□□□□□ -2.25
MKS1Q9NXB0 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1□□□□□ -2.25
MKS1Q9NXB0 RPL39P34-201ENST00000477141 156 ntBASIC1□□□□□ -2.25
MKS1Q9NXB0 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1□□□□□ -2.25
MKS1Q9NXB0 RNU6-1194P-201ENST00000516208 104 ntBASIC1□□□□□ -2.25
MKS1Q9NXB0 RNU6-448P-201ENST00000517052 107 ntBASIC1□□□□□ -2.25
MKS1Q9NXB0 AP003327.1-201ENST00000529684 127 ntBASIC1□□□□□ -2.25
MKS1Q9NXB0 AC011195.1-201ENST00000578177 177 ntBASIC1□□□□□ -2.25
MKS1Q9NXB0 AC244098.3-201ENST00000424803 96 ntBASIC0.99□□□□□ -2.25
MKS1Q9NXB0 MIR4653-201ENST00000585107 83 ntBASIC0.99□□□□□ -2.25
MKS1Q9NXB0 MIR376B-201ENST00000614515 100 ntBASIC0.99□□□□□ -2.25
MKS1Q9NXB0 AL035470.1-201ENST00000622571 220 ntBASIC0.99□□□□□ -2.25
MKS1Q9NXB0 AP001362.1-201ENST00000625165 124 ntBASIC0.99□□□□□ -2.25
MKS1Q9NXB0 AL162726.3-218ENST00000636401 95 ntBASIC0.99□□□□□ -2.25
MKS1Q9NXB0 Y_RNA.85-201ENST00000363014 111 ntBASIC0.98□□□□□ -2.25
MKS1Q9NXB0 RNU4-38P-201ENST00000364472 129 ntBASIC0.98□□□□□ -2.25
MKS1Q9NXB0 Y_RNA.507-201ENST00000384500 99 ntBASIC0.98□□□□□ -2.25
MKS1Q9NXB0 Y_RNA.549-201ENST00000384657 102 ntBASIC0.98□□□□□ -2.25
MKS1Q9NXB0 MIR605-201ENST00000385078 83 ntBASIC0.98□□□□□ -2.25
MKS1Q9NXB0 SNORA7.5-201ENST00000410672 110 ntBASIC0.98□□□□□ -2.25
MKS1Q9NXB0 RNU6-321P-201ENST00000410912 106 ntBASIC0.98□□□□□ -2.25
MKS1Q9NXB0 MTND5P34-201ENST00000568888 325 ntBASIC0.98□□□□□ -2.25
MKS1Q9NXB0 AC013244.2-201ENST00000603396 103 ntBASIC0.98□□□□□ -2.25
MKS1Q9NXB0 AC211469.2-201ENST00000605461 205 ntBASIC0.98□□□□□ -2.25
MKS1Q9NXB0 RNU6-392P-201ENST00000364926 101 ntBASIC0.97□□□□□ -2.25
MKS1Q9NXB0 RNU6-429P-201ENST00000384582 108 ntBASIC0.97□□□□□ -2.25
MKS1Q9NXB0 RNU6-816P-201ENST00000390914 107 ntBASIC0.97□□□□□ -2.25
MKS1Q9NXB0 RNU6-1268P-201ENST00000391214 107 ntBASIC0.97□□□□□ -2.25
MKS1Q9NXB0 RNU6-1239P-201ENST00000391310 107 ntBASIC0.97□□□□□ -2.25
MKS1Q9NXB0 SNORD100-201ENST00000408573 76 ntBASIC0.97□□□□□ -2.25
MKS1Q9NXB0 MIR1912-201ENST00000410389 80 ntBASIC0.97□□□□□ -2.25
MKS1Q9NXB0 AC002350.1-201ENST00000490759 375 ntBASIC0.97□□□□□ -2.25
MKS1Q9NXB0 RNU6-1053P-201ENST00000515930 101 ntBASIC0.97□□□□□ -2.25
MKS1Q9NXB0 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.96□□□□□ -2.26
MKS1Q9NXB0 HSBP1P2-201ENST00000299671 229 ntBASIC0.96□□□□□ -2.26
MKS1Q9NXB0 RNU6-834P-201ENST00000362367 110 ntBASIC0.96□□□□□ -2.26
MKS1Q9NXB0 SNORA63.5-201ENST00000363548 123 ntBASIC0.96□□□□□ -2.26
MKS1Q9NXB0 Y_RNA.155-201ENST00000363632 101 ntBASIC0.96□□□□□ -2.26
MKS1Q9NXB0 Y_RNA.309-201ENST00000365046 111 ntBASIC0.96□□□□□ -2.26
MKS1Q9NXB0 RNU6-409P-201ENST00000384114 104 ntBASIC0.96□□□□□ -2.26
MKS1Q9NXB0 RNU6-1144P-201ENST00000384247 104 ntBASIC0.96□□□□□ -2.26
MKS1Q9NXB0 SNORD116-21-201ENST00000384507 92 ntBASIC0.96□□□□□ -2.26
MKS1Q9NXB0 RNU6-880P-201ENST00000384526 107 ntBASIC0.96□□□□□ -2.26
MKS1Q9NXB0 RNU6-476P-201ENST00000384726 107 ntBASIC0.96□□□□□ -2.26
MKS1Q9NXB0 MIR34C-201ENST00000384831 77 ntBASIC0.96□□□□□ -2.26
MKS1Q9NXB0 RNU6-1064P-201ENST00000410626 104 ntBASIC0.96□□□□□ -2.26
MKS1Q9NXB0 TRMT112P2-201ENST00000512910 132 ntBASIC0.96□□□□□ -2.26
MKS1Q9NXB0 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.96□□□□□ -2.26
MKS1Q9NXB0 RNY1P10-201ENST00000363268 113 ntBASIC0.95□□□□□ -2.26
MKS1Q9NXB0 RNU6-1081P-201ENST00000384537 107 ntBASIC0.95□□□□□ -2.26
MKS1Q9NXB0 RNU6-679P-201ENST00000391003 106 ntBASIC0.95□□□□□ -2.26
MKS1Q9NXB0 Y_RNA.697-201ENST00000516776 113 ntBASIC0.95□□□□□ -2.26
MKS1Q9NXB0 MIR3612-201ENST00000579753 87 ntBASIC0.95□□□□□ -2.26
MKS1Q9NXB0 U2.22-201ENST00000636441 106 ntBASIC0.95□□□□□ -2.26
MKS1Q9NXB0 Y_RNA.360-201ENST00000365512 102 ntBASIC0.94□□□□□ -2.26
MKS1Q9NXB0 Y_RNA.536-201ENST00000384621 113 ntBASIC0.94□□□□□ -2.26
MKS1Q9NXB0 RNU6-733P-201ENST00000410759 104 ntBASIC0.94□□□□□ -2.26
MKS1Q9NXB0 RNU6-1018P-201ENST00000516577 106 ntBASIC0.94□□□□□ -2.26
MKS1Q9NXB0 MIR4500-201ENST00000579472 76 ntBASIC0.94□□□□□ -2.26
MKS1Q9NXB0 Y_RNA.35-201ENST00000362601 101 ntBASIC0.93□□□□□ -2.26
MKS1Q9NXB0 RNU6-1313P-201ENST00000362622 102 ntBASIC0.93□□□□□ -2.26
MKS1Q9NXB0 Y_RNA.281-201ENST00000364774 94 ntBASIC0.93□□□□□ -2.26
MKS1Q9NXB0 RNA5SP117-201ENST00000365294 118 ntBASIC0.93□□□□□ -2.26
MKS1Q9NXB0 RNU6-1056P-201ENST00000383996 107 ntBASIC0.93□□□□□ -2.26
MKS1Q9NXB0 AL353813.1-201ENST00000440700 253 ntBASIC0.93□□□□□ -2.26
MKS1Q9NXB0 AC087343.1-201ENST00000477341 475 ntBASIC0.93□□□□□ -2.26
MKS1Q9NXB0 AL512310.12-203ENST00000640543 90 ntBASIC0.93□□□□□ -2.26
MKS1Q9NXB0 MIR101-2-201ENST00000362195 79 ntBASIC0.92□□□□□ -2.26
MKS1Q9NXB0 Y_RNA.116-201ENST00000363292 103 ntBASIC0.92□□□□□ -2.26
MKS1Q9NXB0 RNU6-291P-201ENST00000384720 107 ntBASIC0.92□□□□□ -2.26
MKS1Q9NXB0 MIR146A-201ENST00000385201 99 ntBASIC0.92□□□□□ -2.26
MKS1Q9NXB0 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.92□□□□□ -2.26
MKS1Q9NXB0 PSMC1P5-201ENST00000512850 177 ntBASIC0.92□□□□□ -2.26
MKS1Q9NXB0 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.92□□□□□ -2.26
MKS1Q9NXB0 AC068339.1-201ENST00000526965 141 ntBASIC0.92□□□□□ -2.26
MKS1Q9NXB0 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.92□□□□□ -2.26
MKS1Q9NXB0 MIR337-201ENST00000362281 93 ntBASIC0.91□□□□□ -2.26
MKS1Q9NXB0 Y_RNA.49-201ENST00000362714 112 ntBASIC0.91□□□□□ -2.26
MKS1Q9NXB0 RNU6-535P-201ENST00000384722 107 ntBASIC0.91□□□□□ -2.26
MKS1Q9NXB0 RNA5SP222-201ENST00000411039 105 ntBASIC0.91□□□□□ -2.26
MKS1Q9NXB0 RNU6-412P-201ENST00000516434 106 ntBASIC0.91□□□□□ -2.26
MKS1Q9NXB0 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms