Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP3-3Q9BYR6 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP3-3Q9BYR6 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP3-3Q9BYR6 SNORD56.5-201ENST00000364281 72 ntBASIC1.99□□□□□ -2.09
KRTAP3-3Q9BYR6 RNU6-1111P-201ENST00000391118 107 ntBASIC1.99□□□□□ -2.09
KRTAP3-3Q9BYR6 SNORA26.9-201ENST00000391322 122 ntBASIC1.99□□□□□ -2.09
KRTAP3-3Q9BYR6 RNA5SP246-201ENST00000458909 119 ntBASIC1.99□□□□□ -2.09
KRTAP3-3Q9BYR6 RN7SL810P-201ENST00000493031 276 ntBASIC1.99□□□□□ -2.09
KRTAP3-3Q9BYR6 RNU6-782P-201ENST00000516852 104 ntBASIC1.99□□□□□ -2.09
KRTAP3-3Q9BYR6 RNA5SP143-201ENST00000516936 115 ntBASIC1.99□□□□□ -2.09
KRTAP3-3Q9BYR6 RNU6-1174P-201ENST00000517278 101 ntBASIC1.99□□□□□ -2.09
KRTAP3-3Q9BYR6 MIR3162-201ENST00000581818 82 ntBASIC1.99□□□□□ -2.09
KRTAP3-3Q9BYR6 MIR4713-201ENST00000582691 75 ntBASIC1.99□□□□□ -2.09
KRTAP3-3Q9BYR6 MIR7151-201ENST00000617477 60 ntBASIC1.99□□□□□ -2.09
KRTAP3-3Q9BYR6 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC1.99□□□□□ -2.09
KRTAP3-3Q9BYR6 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP3-3Q9BYR6 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP3-3Q9BYR6 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC1.99□□□□□ -2.09
KRTAP3-3Q9BYR6 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
KRTAP3-3Q9BYR6 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP3-3Q9BYR6 SNORA11.3-201ENST00000408471 128 ntBASIC1.98□□□□□ -2.09
KRTAP3-3Q9BYR6 RPS29P17-201ENST00000430795 166 ntBASIC1.98□□□□□ -2.09
KRTAP3-3Q9BYR6 AC073264.2-201ENST00000448886 166 ntBASIC1.98□□□□□ -2.09
KRTAP3-3Q9BYR6 RNA5SP227-201ENST00000516184 113 ntBASIC1.98□□□□□ -2.09
KRTAP3-3Q9BYR6 MIR2114-201ENST00000516645 80 ntBASIC1.98□□□□□ -2.09
KRTAP3-3Q9BYR6 MIR4480-201ENST00000582492 71 ntBASIC1.98□□□□□ -2.09
KRTAP3-3Q9BYR6 SNORA11.6-201ENST00000619030 128 ntBASIC1.98□□□□□ -2.09
KRTAP3-3Q9BYR6 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
KRTAP3-3Q9BYR6 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC1.98□□□□□ -2.09
KRTAP3-3Q9BYR6 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC1.98□□□□□ -2.09
KRTAP3-3Q9BYR6 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP3-3Q9BYR6 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP3-3Q9BYR6 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP3-3Q9BYR6 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC1.98□□□□□ -2.09
KRTAP3-3Q9BYR6 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP3-3Q9BYR6 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC1.98□□□□□ -2.09
KRTAP3-3Q9BYR6 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
KRTAP3-3Q9BYR6 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP3-3Q9BYR6 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
KRTAP3-3Q9BYR6 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP3-3Q9BYR6 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
KRTAP3-3Q9BYR6 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP3-3Q9BYR6 RNU1-13P-201ENST00000384499 162 ntBASIC1.97□□□□□ -2.09
KRTAP3-3Q9BYR6 MIR105-2-201ENST00000385083 81 ntBASIC1.97□□□□□ -2.09
KRTAP3-3Q9BYR6 SNORA49-201ENST00000386157 136 ntBASIC1.97□□□□□ -2.09
KRTAP3-3Q9BYR6 SNORD79.1-201ENST00000516069 84 ntBASIC1.97□□□□□ -2.09
KRTAP3-3Q9BYR6 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC1.97□□□□□ -2.09
KRTAP3-3Q9BYR6 AC104408.1-201ENST00000605241 170 ntBASIC1.97□□□□□ -2.09
KRTAP3-3Q9BYR6 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP3-3Q9BYR6 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC1.97□□□□□ -2.09
KRTAP3-3Q9BYR6 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
KRTAP3-3Q9BYR6 RNU6-502P-201ENST00000362419 108 ntBASIC1.96□□□□□ -2.1
KRTAP3-3Q9BYR6 SNORD35B-201ENST00000363660 87 ntBASIC1.96□□□□□ -2.1
KRTAP3-3Q9BYR6 RNU6-525P-201ENST00000363685 104 ntBASIC1.96□□□□□ -2.1
KRTAP3-3Q9BYR6 SNORD114-29-201ENST00000364819 70 ntBASIC1.96□□□□□ -2.1
KRTAP3-3Q9BYR6 MIR550A3-201ENST00000390735 95 ntBASIC1.96□□□□□ -2.1
KRTAP3-3Q9BYR6 RNU6-910P-201ENST00000390844 107 ntBASIC1.96□□□□□ -2.1
KRTAP3-3Q9BYR6 AC011998.1-201ENST00000433403 117 ntBASIC1.96□□□□□ -2.1
KRTAP3-3Q9BYR6 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC1.96□□□□□ -2.1
KRTAP3-3Q9BYR6 AC083863.1-201ENST00000438811 231 ntBASIC1.96□□□□□ -2.1
KRTAP3-3Q9BYR6 RNU7-88P-201ENST00000458752 63 ntBASIC1.96□□□□□ -2.1
KRTAP3-3Q9BYR6 RNU6-300P-201ENST00000459080 104 ntBASIC1.96□□□□□ -2.1
KRTAP3-3Q9BYR6 RNY1P9-201ENST00000532431 109 ntBASIC1.96□□□□□ -2.1
KRTAP3-3Q9BYR6 MIR5684-201ENST00000585074 65 ntBASIC1.96□□□□□ -2.1
KRTAP3-3Q9BYR6 MIR4781-201ENST00000585250 76 ntBASIC1.96□□□□□ -2.1
KRTAP3-3Q9BYR6 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC1.96□□□□□ -2.1
KRTAP3-3Q9BYR6 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC1.95□□□□□ -2.1
KRTAP3-3Q9BYR6 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC1.95□□□□□ -2.1
KRTAP3-3Q9BYR6 RN7SL826P-201ENST00000479724 288 ntBASIC1.95□□□□□ -2.1
KRTAP3-3Q9BYR6 RPL23AP94-201ENST00000512518 302 ntBASIC1.95□□□□□ -2.1
KRTAP3-3Q9BYR6 RNA5SP320-201ENST00000516263 124 ntBASIC1.95□□□□□ -2.1
KRTAP3-3Q9BYR6 AC025627.2-201ENST00000576220 160 ntBASIC1.95□□□□□ -2.1
KRTAP3-3Q9BYR6 MIR4715-201ENST00000584117 79 ntBASIC1.95□□□□□ -2.1
KRTAP3-3Q9BYR6 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC1.95□□□□□ -2.1
KRTAP3-3Q9BYR6 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC1.95□□□□□ -2.1
KRTAP3-3Q9BYR6 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC1.95□□□□□ -2.1
KRTAP3-3Q9BYR6 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC1.94□□□□□ -2.1
KRTAP3-3Q9BYR6 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP3-3Q9BYR6 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP3-3Q9BYR6 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP3-3Q9BYR6 RNA5SP399-201ENST00000364003 117 ntBASIC1.94□□□□□ -2.1
KRTAP3-3Q9BYR6 RNA5SP505-201ENST00000364748 108 ntBASIC1.94□□□□□ -2.1
KRTAP3-3Q9BYR6 SNORD89-201ENST00000390981 114 ntBASIC1.94□□□□□ -2.1
KRTAP3-3Q9BYR6 MIR1251-201ENST00000408552 70 ntBASIC1.94□□□□□ -2.1
KRTAP3-3Q9BYR6 MIR4425-201ENST00000580572 84 ntBASIC1.94□□□□□ -2.1
KRTAP3-3Q9BYR6 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC1.94□□□□□ -2.1
KRTAP3-3Q9BYR6 AC244205.2-202ENST00000635781 342 ntBASIC1.94□□□□□ -2.1
KRTAP3-3Q9BYR6 MIR492-201ENST00000638676 116 ntBASIC1.94□□□□□ -2.1
KRTAP3-3Q9BYR6 LINC02471-203ENST00000641941 4752 ntBASIC1.94□□□□□ -2.1
KRTAP3-3Q9BYR6 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
KRTAP3-3Q9BYR6 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP3-3Q9BYR6 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP3-3Q9BYR6 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
KRTAP3-3Q9BYR6 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP3-3Q9BYR6 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
KRTAP3-3Q9BYR6 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP3-3Q9BYR6 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP3-3Q9BYR6 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC1.93□□□□□ -2.1
KRTAP3-3Q9BYR6 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP3-3Q9BYR6 RNA5SP447-201ENST00000363749 119 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 274.5 ms