Protein–RNA interactions for Protein: Q9BRG2

SH2D3A, SH2 domain-containing protein 3A, humanhuman

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3AQ9BRG2 RNU6-860P-201ENST00000410860 104 ntBASIC1.36□□□□□ -2.19
SH2D3AQ9BRG2 RNU6-1217P-201ENST00000411276 104 ntBASIC1.36□□□□□ -2.19
SH2D3AQ9BRG2 RNU6-785P-201ENST00000411324 104 ntBASIC1.36□□□□□ -2.19
SH2D3AQ9BRG2 AC004941.2-201ENST00000427009 228 ntBASIC1.36□□□□□ -2.19
SH2D3AQ9BRG2 RPL39P39-201ENST00000455840 151 ntBASIC1.36□□□□□ -2.19
SH2D3AQ9BRG2 snoU13.21-201ENST00000459368 105 ntBASIC1.36□□□□□ -2.19
SH2D3AQ9BRG2 MIR4264-201ENST00000583520 66 ntBASIC1.36□□□□□ -2.19
SH2D3AQ9BRG2 MIR4777-201ENST00000583710 86 ntBASIC1.36□□□□□ -2.19
SH2D3AQ9BRG2 MIR4439-201ENST00000583746 80 ntBASIC1.36□□□□□ -2.19
SH2D3AQ9BRG2 U6.90-201ENST00000614007 104 ntBASIC1.36□□□□□ -2.19
SH2D3AQ9BRG2 U6.70-201ENST00000620287 104 ntBASIC1.36□□□□□ -2.19
SH2D3AQ9BRG2 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.36□□□□□ -2.19
SH2D3AQ9BRG2 MIR6516-201ENST00000630554 81 ntBASIC1.36□□□□□ -2.19
SH2D3AQ9BRG2 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
SH2D3AQ9BRG2 RNU6-170P-201ENST00000362832 104 ntBASIC1.35□□□□□ -2.19
SH2D3AQ9BRG2 RNA5SP264-201ENST00000363115 107 ntBASIC1.35□□□□□ -2.19
SH2D3AQ9BRG2 Y_RNA.107-201ENST00000363190 121 ntBASIC1.35□□□□□ -2.19
SH2D3AQ9BRG2 Y_RNA.342-201ENST00000365352 113 ntBASIC1.35□□□□□ -2.19
SH2D3AQ9BRG2 RNU6-949P-201ENST00000384040 107 ntBASIC1.35□□□□□ -2.19
SH2D3AQ9BRG2 Y_RNA.448-201ENST00000384185 108 ntBASIC1.35□□□□□ -2.19
SH2D3AQ9BRG2 Y_RNA.467-201ENST00000384297 102 ntBASIC1.35□□□□□ -2.19
SH2D3AQ9BRG2 RNU7-61P-201ENST00000515897 61 ntBASIC1.35□□□□□ -2.19
SH2D3AQ9BRG2 MIR2115-201ENST00000516657 100 ntBASIC1.35□□□□□ -2.19
SH2D3AQ9BRG2 AP000753.3-201ENST00000604083 169 ntBASIC1.35□□□□□ -2.19
SH2D3AQ9BRG2 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.35□□□□□ -2.19
SH2D3AQ9BRG2 MIR6504-201ENST00000613520 61 ntBASIC1.35□□□□□ -2.19
SH2D3AQ9BRG2 MIR376B-201ENST00000614515 100 ntBASIC1.35□□□□□ -2.19
SH2D3AQ9BRG2 MIR6740-201ENST00000618268 113 ntBASIC1.35□□□□□ -2.19
SH2D3AQ9BRG2 MIR30D-201ENST00000362283 70 ntBASIC1.34□□□□□ -2.19
SH2D3AQ9BRG2 Y_RNA.191-201ENST00000363972 113 ntBASIC1.34□□□□□ -2.19
SH2D3AQ9BRG2 MIR34C-201ENST00000384831 77 ntBASIC1.34□□□□□ -2.19
SH2D3AQ9BRG2 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.34□□□□□ -2.19
SH2D3AQ9BRG2 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
SH2D3AQ9BRG2 RNU6-1321P-201ENST00000390905 107 ntBASIC1.34□□□□□ -2.19
SH2D3AQ9BRG2 RNU6-644P-201ENST00000391155 98 ntBASIC1.34□□□□□ -2.19
SH2D3AQ9BRG2 MIR1276-201ENST00000408707 83 ntBASIC1.34□□□□□ -2.19
SH2D3AQ9BRG2 MIR6078-201ENST00000611069 100 ntBASIC1.34□□□□□ -2.19
SH2D3AQ9BRG2 SEPT14P17-201ENST00000617978 177 ntBASIC1.34□□□□□ -2.19
SH2D3AQ9BRG2 Y_RNA.95-201ENST00000363079 95 ntBASIC1.33□□□□□ -2.2
SH2D3AQ9BRG2 SNORD45B-201ENST00000364617 72 ntBASIC1.33□□□□□ -2.2
SH2D3AQ9BRG2 RNU6-955P-201ENST00000410497 104 ntBASIC1.33□□□□□ -2.2
SH2D3AQ9BRG2 RNU6-902P-201ENST00000517212 91 ntBASIC1.33□□□□□ -2.2
SH2D3AQ9BRG2 AL078603.1-201ENST00000603824 313 ntBASIC1.33□□□□□ -2.2
SH2D3AQ9BRG2 MALAT1.1-201ENST00000618249 95 ntBASIC1.33□□□□□ -2.2
SH2D3AQ9BRG2 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.33□□□□□ -2.2
SH2D3AQ9BRG2 SNORD114-27-201ENST00000363766 70 ntBASIC1.32□□□□□ -2.2
SH2D3AQ9BRG2 SNORD38.1-201ENST00000363863 68 ntBASIC1.32□□□□□ -2.2
SH2D3AQ9BRG2 MIR588-201ENST00000384900 83 ntBASIC1.32□□□□□ -2.2
SH2D3AQ9BRG2 RNU6-762P-201ENST00000517107 102 ntBASIC1.32□□□□□ -2.2
SH2D3AQ9BRG2 AC006254.2-201ENST00000603259 279 ntBASIC1.32□□□□□ -2.2
SH2D3AQ9BRG2 AC020891.4-201ENST00000605745 93 ntBASIC1.32□□□□□ -2.2
SH2D3AQ9BRG2 AL512310.12-203ENST00000640543 90 ntBASIC1.32□□□□□ -2.2
SH2D3AQ9BRG2 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
SH2D3AQ9BRG2 AC008163.1-202ENST00000636004 2889 ntBASIC1.31□□□□□ -2.2
SH2D3AQ9BRG2 MIR150-201ENST00000385048 84 ntBASIC1.31□□□□□ -2.2
SH2D3AQ9BRG2 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.31□□□□□ -2.2
SH2D3AQ9BRG2 AC048334.1-201ENST00000477975 159 ntBASIC1.31□□□□□ -2.2
SH2D3AQ9BRG2 Y_RNA.659-201ENST00000515994 113 ntBASIC1.31□□□□□ -2.2
SH2D3AQ9BRG2 RN7SKP88-201ENST00000516847 250 ntBASIC1.31□□□□□ -2.2
SH2D3AQ9BRG2 SNORA4-201ENST00000584302 138 ntBASIC1.31□□□□□ -2.2
SH2D3AQ9BRG2 7SK.8-201ENST00000612110 250 ntBASIC1.31□□□□□ -2.2
SH2D3AQ9BRG2 7SK.11-201ENST00000615477 250 ntBASIC1.31□□□□□ -2.2
SH2D3AQ9BRG2 MIR6734-201ENST00000621166 68 ntBASIC1.31□□□□□ -2.2
SH2D3AQ9BRG2 7SK.13-201ENST00000622040 250 ntBASIC1.31□□□□□ -2.2
SH2D3AQ9BRG2 HSBP1P2-201ENST00000299671 229 ntBASIC1.3□□□□□ -2.2
SH2D3AQ9BRG2 MIR103A2-201ENST00000362154 78 ntBASIC1.3□□□□□ -2.2
SH2D3AQ9BRG2 Y_RNA.98-201ENST00000363109 102 ntBASIC1.3□□□□□ -2.2
SH2D3AQ9BRG2 RNU6-1163P-201ENST00000364516 107 ntBASIC1.3□□□□□ -2.2
SH2D3AQ9BRG2 RNY1P2-201ENST00000364820 117 ntBASIC1.3□□□□□ -2.2
SH2D3AQ9BRG2 Y_RNA.363-201ENST00000365529 113 ntBASIC1.3□□□□□ -2.2
SH2D3AQ9BRG2 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.3□□□□□ -2.2
SH2D3AQ9BRG2 RNU7-48P-201ENST00000458875 63 ntBASIC1.3□□□□□ -2.2
SH2D3AQ9BRG2 RNU6-844P-201ENST00000517175 102 ntBASIC1.3□□□□□ -2.2
SH2D3AQ9BRG2 MIR4452-201ENST00000583004 71 ntBASIC1.3□□□□□ -2.2
SH2D3AQ9BRG2 MIR96-201ENST00000362288 78 ntBASIC1.29□□□□□ -2.2
SH2D3AQ9BRG2 Y_RNA.168-201ENST00000363740 102 ntBASIC1.29□□□□□ -2.2
SH2D3AQ9BRG2 Y_RNA.173-201ENST00000363776 113 ntBASIC1.29□□□□□ -2.2
SH2D3AQ9BRG2 Y_RNA.290-201ENST00000364879 114 ntBASIC1.29□□□□□ -2.2
SH2D3AQ9BRG2 SNORD26-201ENST00000384147 75 ntBASIC1.29□□□□□ -2.2
SH2D3AQ9BRG2 MT-TF-201ENST00000387314 71 ntBASIC1.29□□□□□ -2.2
SH2D3AQ9BRG2 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
SH2D3AQ9BRG2 MIR1302-4-201ENST00000408701 150 ntBASIC1.29□□□□□ -2.2
SH2D3AQ9BRG2 RNU6-1165P-201ENST00000410119 107 ntBASIC1.29□□□□□ -2.2
SH2D3AQ9BRG2 RNA5SP237-201ENST00000410414 113 ntBASIC1.29□□□□□ -2.2
SH2D3AQ9BRG2 AC109327.2-201ENST00000448339 378 ntBASIC1.29□□□□□ -2.2
SH2D3AQ9BRG2 RNA5SP102-201ENST00000516865 106 ntBASIC1.29□□□□□ -2.2
SH2D3AQ9BRG2 AC096720.1-201ENST00000604441 183 ntBASIC1.29□□□□□ -2.2
SH2D3AQ9BRG2 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.29□□□□□ -2.2
SH2D3AQ9BRG2 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.29□□□□□ -2.2
SH2D3AQ9BRG2 Y_RNA.96-201ENST00000363092 109 ntBASIC1.28□□□□□ -2.2
SH2D3AQ9BRG2 Y_RNA.220-201ENST00000364244 109 ntBASIC1.28□□□□□ -2.2
SH2D3AQ9BRG2 RNU6-294P-201ENST00000364999 102 ntBASIC1.28□□□□□ -2.2
SH2D3AQ9BRG2 Y_RNA.330-201ENST00000365230 109 ntBASIC1.28□□□□□ -2.2
SH2D3AQ9BRG2 RNU6-42P-201ENST00000384165 107 ntBASIC1.28□□□□□ -2.2
SH2D3AQ9BRG2 U8.15-201ENST00000390947 134 ntBASIC1.28□□□□□ -2.2
SH2D3AQ9BRG2 RNA5SP220-201ENST00000516298 104 ntBASIC1.28□□□□□ -2.2
SH2D3AQ9BRG2 AP001362.1-201ENST00000625165 124 ntBASIC1.28□□□□□ -2.2
SH2D3AQ9BRG2 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.27□□□□□ -2.21
SH2D3AQ9BRG2 SNORD73B-201ENST00000364394 72 ntBASIC1.27□□□□□ -2.21
SH2D3AQ9BRG2 SNORA75.2-201ENST00000391138 150 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 166.4 ms