Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 Y_RNA.275-201ENST00000364726 110 ntBASIC-0.9□□□□□ -2.55
VAT1Q99536 Y_RNA.294-201ENST00000364916 102 ntBASIC-0.9□□□□□ -2.55
VAT1Q99536 MIR617-201ENST00000385030 97 ntBASIC-0.9□□□□□ -2.55
VAT1Q99536 MIR548I2-201ENST00000408348 149 ntBASIC-0.9□□□□□ -2.55
VAT1Q99536 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.9□□□□□ -2.55
VAT1Q99536 RNU4-63P-201ENST00000411313 118 ntBASIC-0.9□□□□□ -2.55
VAT1Q99536 FGF7P4-201ENST00000509595 295 ntBASIC-0.9□□□□□ -2.55
VAT1Q99536 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-0.9□□□□□ -2.55
VAT1Q99536 SNORD114-15-201ENST00000364687 72 ntBASIC-0.91□□□□□ -2.56
VAT1Q99536 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.91□□□□□ -2.56
VAT1Q99536 RNU4-43P-201ENST00000410628 137 ntBASIC-0.91□□□□□ -2.56
VAT1Q99536 SERF1AP1-201ENST00000514575 187 ntBASIC-0.91□□□□□ -2.56
VAT1Q99536 SNORD116-25-201ENST00000516517 92 ntBASIC-0.91□□□□□ -2.56
VAT1Q99536 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.91□□□□□ -2.56
VAT1Q99536 SNORA40.15-201ENST00000516884 107 ntBASIC-0.91□□□□□ -2.56
VAT1Q99536 MIR4280-201ENST00000582178 76 ntBASIC-0.91□□□□□ -2.56
VAT1Q99536 U6atac.1-201ENST00000616025 117 ntBASIC-0.91□□□□□ -2.56
VAT1Q99536 RNU6-770P-201ENST00000363929 105 ntBASIC-0.92□□□□□ -2.56
VAT1Q99536 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.92□□□□□ -2.56
VAT1Q99536 MIR624-201ENST00000385217 97 ntBASIC-0.92□□□□□ -2.56
VAT1Q99536 Y_RNA.579-201ENST00000390939 94 ntBASIC-0.92□□□□□ -2.56
VAT1Q99536 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.92□□□□□ -2.56
VAT1Q99536 ELOCP20-201ENST00000422460 345 ntBASIC-0.92□□□□□ -2.56
VAT1Q99536 RNU7-48P-201ENST00000458875 63 ntBASIC-0.92□□□□□ -2.56
VAT1Q99536 RNU7-106P-201ENST00000459514 67 ntBASIC-0.92□□□□□ -2.56
VAT1Q99536 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.92□□□□□ -2.56
VAT1Q99536 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-0.92□□□□□ -2.56
VAT1Q99536 RNU6-170P-201ENST00000362832 104 ntBASIC-0.93□□□□□ -2.56
VAT1Q99536 Y_RNA.214-201ENST00000364201 112 ntBASIC-0.93□□□□□ -2.56
VAT1Q99536 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.93□□□□□ -2.56
VAT1Q99536 RNU6-900P-201ENST00000384498 102 ntBASIC-0.93□□□□□ -2.56
VAT1Q99536 MIR206-201ENST00000384872 86 ntBASIC-0.93□□□□□ -2.56
VAT1Q99536 RNU6-381P-201ENST00000391259 108 ntBASIC-0.93□□□□□ -2.56
VAT1Q99536 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.93□□□□□ -2.56
VAT1Q99536 RNU2-35P-201ENST00000516446 142 ntBASIC-0.93□□□□□ -2.56
VAT1Q99536 MIR4460-201ENST00000577862 86 ntBASIC-0.93□□□□□ -2.56
VAT1Q99536 Y_RNA.19-201ENST00000362462 99 ntBASIC-0.94□□□□□ -2.56
VAT1Q99536 RNU6-806P-201ENST00000365147 105 ntBASIC-0.94□□□□□ -2.56
VAT1Q99536 RNY3P15-201ENST00000516297 97 ntBASIC-0.94□□□□□ -2.56
VAT1Q99536 SCARNA24.2-201ENST00000516968 130 ntBASIC-0.94□□□□□ -2.56
VAT1Q99536 AP000676.1-201ENST00000533307 52 ntBASIC-0.94□□□□□ -2.56
VAT1Q99536 AC011603.4-201ENST00000611325 277 ntBASIC-0.94□□□□□ -2.56
VAT1Q99536 Y_RNA.26-201ENST00000362539 101 ntBASIC-0.95□□□□□ -2.56
VAT1Q99536 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.95□□□□□ -2.56
VAT1Q99536 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.95□□□□□ -2.56
VAT1Q99536 MIR204-201ENST00000385200 110 ntBASIC-0.95□□□□□ -2.56
VAT1Q99536 RNU6-101P-201ENST00000410323 104 ntBASIC-0.95□□□□□ -2.56
VAT1Q99536 SNORD2.1-201ENST00000458762 69 ntBASIC-0.95□□□□□ -2.56
VAT1Q99536 MIR2113-201ENST00000459007 91 ntBASIC-0.95□□□□□ -2.56
VAT1Q99536 SNORD38.3-201ENST00000516599 73 ntBASIC-0.95□□□□□ -2.56
VAT1Q99536 RNU6-86P-201ENST00000606534 107 ntBASIC-0.95□□□□□ -2.56
VAT1Q99536 AC145423.2-201ENST00000610631 239 ntBASIC-0.95□□□□□ -2.56
VAT1Q99536 MIR6851-201ENST00000617060 67 ntBASIC-0.95□□□□□ -2.56
VAT1Q99536 U4.1-201ENST00000620349 87 ntBASIC-0.95□□□□□ -2.56
VAT1Q99536 AC090971.5-201ENST00000621102 293 ntBASIC-0.95□□□□□ -2.56
VAT1Q99536 MIR6086-201ENST00000638065 55 ntBASIC-0.95□□□□□ -2.56
VAT1Q99536 Y_RNA.58-201ENST00000362807 102 ntBASIC-0.96□□□□□ -2.56
VAT1Q99536 Y_RNA.64-201ENST00000362845 102 ntBASIC-0.96□□□□□ -2.56
VAT1Q99536 RNY3P1-201ENST00000365085 102 ntBASIC-0.96□□□□□ -2.56
VAT1Q99536 Y_RNA.389-201ENST00000383924 113 ntBASIC-0.96□□□□□ -2.56
VAT1Q99536 SNORA51.5-201ENST00000384126 131 ntBASIC-0.96□□□□□ -2.56
VAT1Q99536 MT-TY-201ENST00000387409 66 ntBASIC-0.96□□□□□ -2.56
VAT1Q99536 RNU6-651P-201ENST00000411040 105 ntBASIC-0.96□□□□□ -2.56
VAT1Q99536 AC021146.6-201ENST00000514659 117 ntBASIC-0.96□□□□□ -2.56
VAT1Q99536 RNU6-138P-201ENST00000515952 107 ntBASIC-0.96□□□□□ -2.56
VAT1Q99536 AP001362.1-201ENST00000625165 124 ntBASIC-0.96□□□□□ -2.56
VAT1Q99536 MIR20A-201ENST00000362279 71 ntBASIC-0.97□□□□□ -2.56
VAT1Q99536 Y_RNA.84-201ENST00000363011 104 ntBASIC-0.97□□□□□ -2.56
VAT1Q99536 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.97□□□□□ -2.56
VAT1Q99536 SNORD115-44-201ENST00000365391 82 ntBASIC-0.97□□□□□ -2.56
VAT1Q99536 RNU6-901P-201ENST00000384593 106 ntBASIC-0.97□□□□□ -2.56
VAT1Q99536 SNORA49-201ENST00000386157 136 ntBASIC-0.97□□□□□ -2.56
VAT1Q99536 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.97□□□□□ -2.56
VAT1Q99536 RNU6-1338P-201ENST00000516328 91 ntBASIC-0.97□□□□□ -2.56
VAT1Q99536 AP001328.1-201ENST00000528550 176 ntBASIC-0.97□□□□□ -2.56
VAT1Q99536 MIR3681-201ENST00000580089 72 ntBASIC-0.97□□□□□ -2.56
VAT1Q99536 RNU4-40P-201ENST00000364351 143 ntBASIC-0.98□□□□□ -2.57
VAT1Q99536 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.98□□□□□ -2.57
VAT1Q99536 Y_RNA.395-201ENST00000383945 109 ntBASIC-0.98□□□□□ -2.57
VAT1Q99536 Y_RNA.529-201ENST00000384586 119 ntBASIC-0.98□□□□□ -2.57
VAT1Q99536 snoU13.13-201ENST00000458842 104 ntBASIC-0.98□□□□□ -2.57
VAT1Q99536 RNU6-881P-201ENST00000516813 102 ntBASIC-0.98□□□□□ -2.57
VAT1Q99536 Y_RNA.721-201ENST00000517207 102 ntBASIC-0.98□□□□□ -2.57
VAT1Q99536 AL365265.1-201ENST00000621045 234 ntBASIC-0.98□□□□□ -2.57
VAT1Q99536 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.99□□□□□ -2.57
VAT1Q99536 Y_RNA.390-201ENST00000383932 102 ntBASIC-0.99□□□□□ -2.57
VAT1Q99536 RNU6-571P-201ENST00000384128 107 ntBASIC-0.99□□□□□ -2.57
VAT1Q99536 AL121914.1-201ENST00000450188 156 ntBASIC-0.99□□□□□ -2.57
VAT1Q99536 RNU7-55P-201ENST00000459426 62 ntBASIC-0.99□□□□□ -2.57
VAT1Q99536 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.99□□□□□ -2.57
VAT1Q99536 RNA5SP236-201ENST00000516169 116 ntBASIC-0.99□□□□□ -2.57
VAT1Q99536 RNU6-287P-201ENST00000516230 98 ntBASIC-0.99□□□□□ -2.57
VAT1Q99536 IGKV1-22-201ENST00000524313 326 ntBASIC-0.99□□□□□ -2.57
VAT1Q99536 Y_RNA.44-201ENST00000362676 108 ntBASIC-1□□□□□ -2.57
VAT1Q99536 Y_RNA.82-201ENST00000363000 102 ntBASIC-1□□□□□ -2.57
VAT1Q99536 Y_RNA.92-201ENST00000363043 102 ntBASIC-1□□□□□ -2.57
VAT1Q99536 Y_RNA.235-201ENST00000364412 102 ntBASIC-1□□□□□ -2.57
VAT1Q99536 Y_RNA.306-201ENST00000365015 102 ntBASIC-1□□□□□ -2.57
VAT1Q99536 Y_RNA.312-201ENST00000365089 102 ntBASIC-1□□□□□ -2.57
VAT1Q99536 Y_RNA.322-201ENST00000365151 102 ntBASIC-1□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms