Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 RNU6-1216P-201ENST00000362590 107 ntBASIC2.85□□□□□ -1.95
LRCH3Q96II8 SNORA25.3-201ENST00000363205 127 ntBASIC2.85□□□□□ -1.95
LRCH3Q96II8 RNU6-669P-201ENST00000365575 107 ntBASIC2.85□□□□□ -1.95
LRCH3Q96II8 Y_RNA.536-201ENST00000384621 113 ntBASIC2.85□□□□□ -1.95
LRCH3Q96II8 RN7SKP123-201ENST00000410732 291 ntBASIC2.85□□□□□ -1.95
LRCH3Q96II8 RNA5SP344-201ENST00000411081 104 ntBASIC2.85□□□□□ -1.95
LRCH3Q96II8 SNORA31.17-201ENST00000516953 127 ntBASIC2.85□□□□□ -1.95
LRCH3Q96II8 MIR4696-201ENST00000581431 70 ntBASIC2.85□□□□□ -1.95
LRCH3Q96II8 DLEU2_3.1-201ENST00000620005 73 ntBASIC2.85□□□□□ -1.95
LRCH3Q96II8 U6.100-201ENST00000636230 99 ntBASIC2.85□□□□□ -1.95
LRCH3Q96II8 SNORD113.1-201ENST00000363280 73 ntBASIC2.84□□□□□ -1.95
LRCH3Q96II8 RNU6-824P-201ENST00000363724 104 ntBASIC2.84□□□□□ -1.95
LRCH3Q96II8 SNORD101-201ENST00000384027 73 ntBASIC2.84□□□□□ -1.95
LRCH3Q96II8 SNORD41-201ENST00000386967 70 ntBASIC2.84□□□□□ -1.95
LRCH3Q96II8 MIR6733-201ENST00000635723 61 ntBASIC2.84□□□□□ -1.95
LRCH3Q96II8 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
LRCH3Q96II8 MIR194-1-201ENST00000384892 85 ntBASIC2.83□□□□□ -1.96
LRCH3Q96II8 MIR519A1-201ENST00000385257 85 ntBASIC2.83□□□□□ -1.96
LRCH3Q96II8 RNU6-604P-201ENST00000390917 100 ntBASIC2.83□□□□□ -1.96
LRCH3Q96II8 RNU6-360P-201ENST00000390944 104 ntBASIC2.83□□□□□ -1.96
LRCH3Q96II8 UBBP3-201ENST00000445497 241 ntBASIC2.83□□□□□ -1.96
LRCH3Q96II8 AC097510.1-201ENST00000510945 133 ntBASIC2.83□□□□□ -1.96
LRCH3Q96II8 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
LRCH3Q96II8 SNORA24B-201ENST00000384176 131 ntBASIC2.82□□□□□ -1.96
LRCH3Q96II8 AC004965.1-201ENST00000413033 213 ntBASIC2.82□□□□□ -1.96
LRCH3Q96II8 AC003982.1-202ENST00000469928 248 ntBASIC2.82□□□□□ -1.96
LRCH3Q96II8 RPL23AP42-201ENST00000471152 471 ntBASIC2.82□□□□□ -1.96
LRCH3Q96II8 Y_RNA.809-201ENST00000516058 95 ntBASIC2.82□□□□□ -1.96
LRCH3Q96II8 DLEU2_3.2-201ENST00000612883 73 ntBASIC2.82□□□□□ -1.96
LRCH3Q96II8 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
LRCH3Q96II8 RNU6-1260P-201ENST00000362944 107 ntBASIC2.81□□□□□ -1.96
LRCH3Q96II8 MIR499A-201ENST00000384903 122 ntBASIC2.81□□□□□ -1.96
LRCH3Q96II8 MT-TN-201ENST00000387400 73 ntBASIC2.81□□□□□ -1.96
LRCH3Q96II8 SNORD93-201ENST00000408813 74 ntBASIC2.81□□□□□ -1.96
LRCH3Q96II8 RPL30P7-201ENST00000479312 323 ntBASIC2.81□□□□□ -1.96
LRCH3Q96II8 RNU6-977P-201ENST00000516411 103 ntBASIC2.81□□□□□ -1.96
LRCH3Q96II8 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.81□□□□□ -1.96
LRCH3Q96II8 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
LRCH3Q96II8 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
LRCH3Q96II8 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
LRCH3Q96II8 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.8□□□□□ -1.96
LRCH3Q96II8 MIR2115-201ENST00000516657 100 ntBASIC2.8□□□□□ -1.96
LRCH3Q96II8 AL109933.3-201ENST00000619095 188 ntBASIC2.8□□□□□ -1.96
LRCH3Q96II8 IST1-227ENST00000626438 126 ntTSL 5 BASIC2.8□□□□□ -1.96
LRCH3Q96II8 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
LRCH3Q96II8 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
LRCH3Q96II8 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
LRCH3Q96II8 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
LRCH3Q96II8 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
LRCH3Q96II8 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
LRCH3Q96II8 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.79□□□□□ -1.96
LRCH3Q96II8 MIR101-2-201ENST00000362195 79 ntBASIC2.79□□□□□ -1.96
LRCH3Q96II8 RNU6-403P-201ENST00000363163 104 ntBASIC2.79□□□□□ -1.96
LRCH3Q96II8 RNU1-51P-201ENST00000365345 176 ntBASIC2.79□□□□□ -1.96
LRCH3Q96II8 SNORA64-201ENST00000384674 134 ntBASIC2.79□□□□□ -1.96
LRCH3Q96II8 RNA5SP282-201ENST00000516355 108 ntBASIC2.79□□□□□ -1.96
LRCH3Q96II8 RNU6-922P-201ENST00000516753 99 ntBASIC2.79□□□□□ -1.96
LRCH3Q96II8 RNU6-56P-201ENST00000516986 93 ntBASIC2.79□□□□□ -1.96
LRCH3Q96II8 MIR548H5-201ENST00000580314 60 ntBASIC2.79□□□□□ -1.96
LRCH3Q96II8 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC2.79□□□□□ -1.96
LRCH3Q96II8 AC013244.2-201ENST00000603396 103 ntBASIC2.79□□□□□ -1.96
LRCH3Q96II8 MIR8070-201ENST00000616510 88 ntBASIC2.79□□□□□ -1.96
LRCH3Q96II8 U1.36-201ENST00000620684 176 ntBASIC2.79□□□□□ -1.96
LRCH3Q96II8 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
LRCH3Q96II8 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.79□□□□□ -1.96
LRCH3Q96II8 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
LRCH3Q96II8 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.78□□□□□ -1.96
LRCH3Q96II8 RNU1-17P-201ENST00000363022 152 ntBASIC2.78□□□□□ -1.96
LRCH3Q96II8 RNU1-36P-201ENST00000365130 165 ntBASIC2.78□□□□□ -1.96
LRCH3Q96II8 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.78□□□□□ -1.96
LRCH3Q96II8 MTRNR2L2-201ENST00000604882 87 ntBASIC2.78□□□□□ -1.96
LRCH3Q96II8 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.78□□□□□ -1.96
LRCH3Q96II8 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.78□□□□□ -1.97
LRCH3Q96II8 RNA5SP259-201ENST00000365541 109 ntBASIC2.77□□□□□ -1.97
LRCH3Q96II8 SNORA40.6-201ENST00000391153 128 ntBASIC2.77□□□□□ -1.97
LRCH3Q96II8 SNORD88.1-201ENST00000408684 91 ntBASIC2.77□□□□□ -1.97
LRCH3Q96II8 RNU6-1052P-201ENST00000411398 104 ntBASIC2.77□□□□□ -1.97
LRCH3Q96II8 RN7SL274P-201ENST00000492268 272 ntBASIC2.77□□□□□ -1.97
LRCH3Q96II8 RNU6-719P-201ENST00000516671 104 ntBASIC2.77□□□□□ -1.97
LRCH3Q96II8 RNU7-10P-201ENST00000607194 63 ntBASIC2.77□□□□□ -1.97
LRCH3Q96II8 AC069503.3-201ENST00000618674 145 ntBASIC2.77□□□□□ -1.97
LRCH3Q96II8 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
LRCH3Q96II8 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
LRCH3Q96II8 RNU6-1054P-201ENST00000411293 104 ntBASIC2.76□□□□□ -1.97
LRCH3Q96II8 snoU13.25-201ENST00000458945 104 ntBASIC2.76□□□□□ -1.97
LRCH3Q96II8 MIR6516-201ENST00000630554 81 ntBASIC2.76□□□□□ -1.97
LRCH3Q96II8 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
LRCH3Q96II8 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
LRCH3Q96II8 MIR513A1-201ENST00000385138 129 ntBASIC2.75□□□□□ -1.97
LRCH3Q96II8 RNU6-935P-201ENST00000410371 100 ntBASIC2.75□□□□□ -1.97
LRCH3Q96II8 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
LRCH3Q96II8 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.75□□□□□ -1.97
LRCH3Q96II8 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
LRCH3Q96II8 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
LRCH3Q96II8 MIR377-201ENST00000362145 69 ntBASIC2.74□□□□□ -1.97
LRCH3Q96II8 SNORD56.5-201ENST00000364281 72 ntBASIC2.74□□□□□ -1.97
LRCH3Q96II8 U8.9-201ENST00000365667 134 ntBASIC2.74□□□□□ -1.97
LRCH3Q96II8 MIR451A-201ENST00000385059 72 ntBASIC2.74□□□□□ -1.97
LRCH3Q96II8 snoU13.18-201ENST00000459483 104 ntBASIC2.74□□□□□ -1.97
LRCH3Q96II8 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 173.6 ms