Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 MIR224-201ENST00000384889 81 ntBASIC-0.66□□□□□ -2.52
ZNF439Q8NDP4 MIR624-201ENST00000385217 97 ntBASIC-0.66□□□□□ -2.52
ZNF439Q8NDP4 MT-TY-201ENST00000387409 66 ntBASIC-0.66□□□□□ -2.52
ZNF439Q8NDP4 RNU6-721P-201ENST00000410155 105 ntBASIC-0.66□□□□□ -2.52
ZNF439Q8NDP4 RNU4-43P-201ENST00000410628 137 ntBASIC-0.66□□□□□ -2.52
ZNF439Q8NDP4 MIR2113-201ENST00000459007 91 ntBASIC-0.66□□□□□ -2.52
ZNF439Q8NDP4 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.66□□□□□ -2.52
ZNF439Q8NDP4 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-0.66□□□□□ -2.52
ZNF439Q8NDP4 AC009779.6-201ENST00000603972 165 ntBASIC-0.66□□□□□ -2.52
ZNF439Q8NDP4 RNU6-170P-201ENST00000362832 104 ntBASIC-0.67□□□□□ -2.52
ZNF439Q8NDP4 Y_RNA.64-201ENST00000362845 102 ntBASIC-0.67□□□□□ -2.52
ZNF439Q8NDP4 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.67□□□□□ -2.52
ZNF439Q8NDP4 RNU6-728P-201ENST00000365375 104 ntBASIC-0.67□□□□□ -2.52
ZNF439Q8NDP4 SNORA63.7-201ENST00000365579 123 ntBASIC-0.67□□□□□ -2.52
ZNF439Q8NDP4 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.67□□□□□ -2.52
ZNF439Q8NDP4 MIR516A2-201ENST00000384888 90 ntBASIC-0.67□□□□□ -2.52
ZNF439Q8NDP4 MIR516A1-201ENST00000385033 90 ntBASIC-0.67□□□□□ -2.52
ZNF439Q8NDP4 MIR204-201ENST00000385200 110 ntBASIC-0.67□□□□□ -2.52
ZNF439Q8NDP4 AL161932.1-201ENST00000437408 146 ntBASIC-0.67□□□□□ -2.52
ZNF439Q8NDP4 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.67□□□□□ -2.52
ZNF439Q8NDP4 MTND5P22-201ENST00000458380 195 ntBASIC-0.67□□□□□ -2.52
ZNF439Q8NDP4 SERF1AP1-201ENST00000514575 187 ntBASIC-0.67□□□□□ -2.52
ZNF439Q8NDP4 RNU6-287P-201ENST00000516230 98 ntBASIC-0.67□□□□□ -2.52
ZNF439Q8NDP4 SNORD116-25-201ENST00000516517 92 ntBASIC-0.67□□□□□ -2.52
ZNF439Q8NDP4 SCARNA24.2-201ENST00000516968 130 ntBASIC-0.67□□□□□ -2.52
ZNF439Q8NDP4 MIR4493-201ENST00000584016 73 ntBASIC-0.67□□□□□ -2.52
ZNF439Q8NDP4 AC037487.3-201ENST00000606668 112 ntBASIC-0.67□□□□□ -2.52
ZNF439Q8NDP4 MIR6851-201ENST00000617060 67 ntBASIC-0.67□□□□□ -2.52
ZNF439Q8NDP4 Y_RNA.197-201ENST00000364004 102 ntBASIC-0.68□□□□□ -2.52
ZNF439Q8NDP4 SNORD115-44-201ENST00000365391 82 ntBASIC-0.68□□□□□ -2.52
ZNF439Q8NDP4 Y_RNA.389-201ENST00000383924 113 ntBASIC-0.68□□□□□ -2.52
ZNF439Q8NDP4 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.68□□□□□ -2.52
ZNF439Q8NDP4 RNU6-571P-201ENST00000384128 107 ntBASIC-0.68□□□□□ -2.52
ZNF439Q8NDP4 RNU6-901P-201ENST00000384593 106 ntBASIC-0.68□□□□□ -2.52
ZNF439Q8NDP4 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.68□□□□□ -2.52
ZNF439Q8NDP4 SNORA79-201ENST00000408376 140 ntBASIC-0.68□□□□□ -2.52
ZNF439Q8NDP4 MIR1252-201ENST00000408861 65 ntBASIC-0.68□□□□□ -2.52
ZNF439Q8NDP4 RNU4-63P-201ENST00000411313 118 ntBASIC-0.68□□□□□ -2.52
ZNF439Q8NDP4 SNORD2.1-201ENST00000458762 69 ntBASIC-0.68□□□□□ -2.52
ZNF439Q8NDP4 RNU7-55P-201ENST00000459426 62 ntBASIC-0.68□□□□□ -2.52
ZNF439Q8NDP4 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.68□□□□□ -2.52
ZNF439Q8NDP4 RNA5SP236-201ENST00000516169 116 ntBASIC-0.68□□□□□ -2.52
ZNF439Q8NDP4 RNU6-570P-201ENST00000517051 105 ntBASIC-0.68□□□□□ -2.52
ZNF439Q8NDP4 MIR376B-201ENST00000614515 100 ntBASIC-0.68□□□□□ -2.52
ZNF439Q8NDP4 Y_RNA.19-201ENST00000362462 99 ntBASIC-0.69□□□□□ -2.52
ZNF439Q8NDP4 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.69□□□□□ -2.52
ZNF439Q8NDP4 RNU6-770P-201ENST00000363929 105 ntBASIC-0.69□□□□□ -2.52
ZNF439Q8NDP4 Y_RNA.248-201ENST00000364501 109 ntBASIC-0.69□□□□□ -2.52
ZNF439Q8NDP4 AC138393.2-201ENST00000414742 246 ntBASIC-0.69□□□□□ -2.52
ZNF439Q8NDP4 AC097510.1-201ENST00000510945 133 ntBASIC-0.69□□□□□ -2.52
ZNF439Q8NDP4 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.69□□□□□ -2.52
ZNF439Q8NDP4 RNU6-881P-201ENST00000516813 102 ntBASIC-0.69□□□□□ -2.52
ZNF439Q8NDP4 AL442663.2-201ENST00000554385 511 ntBASIC-0.69□□□□□ -2.52
ZNF439Q8NDP4 MIR5704-201ENST00000584029 77 ntBASIC-0.69□□□□□ -2.52
ZNF439Q8NDP4 RNU2-4P-201ENST00000606190 192 ntBASIC-0.69□□□□□ -2.52
ZNF439Q8NDP4 AL365265.1-201ENST00000621045 234 ntBASIC-0.69□□□□□ -2.52
ZNF439Q8NDP4 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.69□□□□□ -2.52
ZNF439Q8NDP4 AP001362.1-201ENST00000625165 124 ntBASIC-0.69□□□□□ -2.52
ZNF439Q8NDP4 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.7□□□□□ -2.52
ZNF439Q8NDP4 Y_RNA.58-201ENST00000362807 102 ntBASIC-0.7□□□□□ -2.52
ZNF439Q8NDP4 Y_RNA.84-201ENST00000363011 104 ntBASIC-0.7□□□□□ -2.52
ZNF439Q8NDP4 RNY3P1-201ENST00000365085 102 ntBASIC-0.7□□□□□ -2.52
ZNF439Q8NDP4 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.7□□□□□ -2.52
ZNF439Q8NDP4 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.7□□□□□ -2.52
ZNF439Q8NDP4 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.7□□□□□ -2.52
ZNF439Q8NDP4 Y_RNA.556-201ENST00000384677 113 ntBASIC-0.7□□□□□ -2.52
ZNF439Q8NDP4 MIR604-201ENST00000384880 94 ntBASIC-0.7□□□□□ -2.52
ZNF439Q8NDP4 Y_RNA.579-201ENST00000390939 94 ntBASIC-0.7□□□□□ -2.52
ZNF439Q8NDP4 RNY3P15-201ENST00000516297 97 ntBASIC-0.7□□□□□ -2.52
ZNF439Q8NDP4 RNU6-1338P-201ENST00000516328 91 ntBASIC-0.7□□□□□ -2.52
ZNF439Q8NDP4 RNU6-850P-201ENST00000516934 103 ntBASIC-0.7□□□□□ -2.52
ZNF439Q8NDP4 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-0.7□□□□□ -2.52
ZNF439Q8NDP4 MIR4636-201ENST00000582271 80 ntBASIC-0.7□□□□□ -2.52
ZNF439Q8NDP4 MIR8068-201ENST00000618032 68 ntBASIC-0.7□□□□□ -2.52
ZNF439Q8NDP4 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-0.7□□□□□ -2.52
ZNF439Q8NDP4 U6.100-201ENST00000636230 99 ntBASIC-0.7□□□□□ -2.52
ZNF439Q8NDP4 MIR20A-201ENST00000362279 71 ntBASIC-0.71□□□□□ -2.52
ZNF439Q8NDP4 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.71□□□□□ -2.52
ZNF439Q8NDP4 SNORD114-25-201ENST00000363742 72 ntBASIC-0.71□□□□□ -2.52
ZNF439Q8NDP4 MIR196A1-201ENST00000388006 70 ntBASIC-0.71□□□□□ -2.52
ZNF439Q8NDP4 RNU4-69P-201ENST00000410677 143 ntBASIC-0.71□□□□□ -2.52
ZNF439Q8NDP4 AL121914.1-201ENST00000450188 156 ntBASIC-0.71□□□□□ -2.52
ZNF439Q8NDP4 AC007012.1-201ENST00000567192 175 ntBASIC-0.71□□□□□ -2.52
ZNF439Q8NDP4 AC093783.1-201ENST00000612976 329 ntBASIC-0.71□□□□□ -2.52
ZNF439Q8NDP4 AC087741.2-201ENST00000619415 172 ntBASIC-0.71□□□□□ -2.52
ZNF439Q8NDP4 MTND5P18-201ENST00000445624 1801 ntBASIC-0.71□□□□□ -2.52
ZNF439Q8NDP4 SNORD115-25-201ENST00000362619 82 ntBASIC-0.72□□□□□ -2.52
ZNF439Q8NDP4 RNU6-690P-201ENST00000365242 106 ntBASIC-0.72□□□□□ -2.52
ZNF439Q8NDP4 MIR582-201ENST00000365731 98 ntBASIC-0.72□□□□□ -2.52
ZNF439Q8NDP4 Y_RNA.390-201ENST00000383932 102 ntBASIC-0.72□□□□□ -2.52
ZNF439Q8NDP4 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.72□□□□□ -2.52
ZNF439Q8NDP4 AC244090.1-201ENST00000441884 93 ntBASIC-0.72□□□□□ -2.52
ZNF439Q8NDP4 AL500527.2-201ENST00000454105 95 ntBASIC-0.72□□□□□ -2.52
ZNF439Q8NDP4 AC021146.6-201ENST00000514659 117 ntBASIC-0.72□□□□□ -2.52
ZNF439Q8NDP4 RNU7-123P-201ENST00000515911 60 ntBASIC-0.72□□□□□ -2.52
ZNF439Q8NDP4 RNU7-2P-201ENST00000516096 62 ntBASIC-0.72□□□□□ -2.52
ZNF439Q8NDP4 RNU6-240P-201ENST00000516098 97 ntBASIC-0.72□□□□□ -2.52
ZNF439Q8NDP4 SNORA40.15-201ENST00000516884 107 ntBASIC-0.72□□□□□ -2.52
ZNF439Q8NDP4 AP001328.1-201ENST00000528550 176 ntBASIC-0.72□□□□□ -2.52
ZNF439Q8NDP4 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.72□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 189.2 ms