Protein–RNA interactions for Protein: Q8NCN4

RNF169, E3 ubiquitin-protein ligase RNF169, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF169Q8NCN4 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.41□□□□□ -2.18
RNF169Q8NCN4 AL442128.1-201ENST00000615151 90 ntBASIC1.41□□□□□ -2.18
RNF169Q8NCN4 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
RNF169Q8NCN4 RNU6-905P-201ENST00000384434 107 ntBASIC1.4□□□□□ -2.19
RNF169Q8NCN4 SNORA40.6-201ENST00000391153 128 ntBASIC1.4□□□□□ -2.19
RNF169Q8NCN4 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.4□□□□□ -2.19
RNF169Q8NCN4 RNA5SP95-201ENST00000410319 137 ntBASIC1.4□□□□□ -2.19
RNF169Q8NCN4 AC096949.1-201ENST00000412047 152 ntBASIC1.4□□□□□ -2.19
RNF169Q8NCN4 RNU7-48P-201ENST00000458875 63 ntBASIC1.4□□□□□ -2.19
RNF169Q8NCN4 UBL5P1-201ENST00000507979 193 ntBASIC1.4□□□□□ -2.19
RNF169Q8NCN4 SCARNA23-201ENST00000516060 130 ntBASIC1.4□□□□□ -2.19
RNF169Q8NCN4 Y_RNA.694-201ENST00000516677 117 ntBASIC1.4□□□□□ -2.19
RNF169Q8NCN4 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.39□□□□□ -2.19
RNF169Q8NCN4 Y_RNA.93-201ENST00000363066 109 ntBASIC1.39□□□□□ -2.19
RNF169Q8NCN4 MIR150-201ENST00000385048 84 ntBASIC1.39□□□□□ -2.19
RNF169Q8NCN4 MIR18B-201ENST00000454574 71 ntBASIC1.39□□□□□ -2.19
RNF169Q8NCN4 RNU6-109P-201ENST00000516364 107 ntBASIC1.39□□□□□ -2.19
RNF169Q8NCN4 RNU6-184P-201ENST00000516514 107 ntBASIC1.39□□□□□ -2.19
RNF169Q8NCN4 MIR6504-201ENST00000613520 61 ntBASIC1.39□□□□□ -2.19
RNF169Q8NCN4 MIR376B-201ENST00000614515 100 ntBASIC1.39□□□□□ -2.19
RNF169Q8NCN4 RNU6-865P-201ENST00000364772 107 ntBASIC1.38□□□□□ -2.19
RNF169Q8NCN4 MIR34C-201ENST00000384831 77 ntBASIC1.38□□□□□ -2.19
RNF169Q8NCN4 RNU7-21P-201ENST00000459430 62 ntBASIC1.38□□□□□ -2.19
RNF169Q8NCN4 AC036111.3-201ENST00000526389 112 ntBASIC1.38□□□□□ -2.19
RNF169Q8NCN4 AC105081.1-201ENST00000617727 106 ntBASIC1.38□□□□□ -2.19
RNF169Q8NCN4 AC012676.2-201ENST00000619258 186 ntBASIC1.38□□□□□ -2.19
RNF169Q8NCN4 AL512310.12-203ENST00000640543 90 ntBASIC1.38□□□□□ -2.19
RNF169Q8NCN4 Y_RNA.98-201ENST00000363109 102 ntBASIC1.37□□□□□ -2.19
RNF169Q8NCN4 Y_RNA.107-201ENST00000363190 121 ntBASIC1.37□□□□□ -2.19
RNF169Q8NCN4 SNORD114-27-201ENST00000363766 70 ntBASIC1.37□□□□□ -2.19
RNF169Q8NCN4 SNORD38.1-201ENST00000363863 68 ntBASIC1.37□□□□□ -2.19
RNF169Q8NCN4 Y_RNA.191-201ENST00000363972 113 ntBASIC1.37□□□□□ -2.19
RNF169Q8NCN4 RNY1P2-201ENST00000364820 117 ntBASIC1.37□□□□□ -2.19
RNF169Q8NCN4 SNORA80D-201ENST00000384488 135 ntBASIC1.37□□□□□ -2.19
RNF169Q8NCN4 Y_RNA.508-201ENST00000384502 114 ntBASIC1.37□□□□□ -2.19
RNF169Q8NCN4 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
RNF169Q8NCN4 U8.15-201ENST00000390947 134 ntBASIC1.37□□□□□ -2.19
RNF169Q8NCN4 RPS29P23-201ENST00000458635 123 ntBASIC1.37□□□□□ -2.19
RNF169Q8NCN4 SNORD79.1-201ENST00000516069 84 ntBASIC1.37□□□□□ -2.19
RNF169Q8NCN4 SNORA40.13-201ENST00000516379 120 ntBASIC1.37□□□□□ -2.19
RNF169Q8NCN4 MIR3660-201ENST00000584845 100 ntBASIC1.37□□□□□ -2.19
RNF169Q8NCN4 AP001362.1-201ENST00000625165 124 ntBASIC1.37□□□□□ -2.19
RNF169Q8NCN4 AC008163.1-202ENST00000636004 2889 ntBASIC1.37□□□□□ -2.19
RNF169Q8NCN4 MIR26B-201ENST00000362251 77 ntBASIC1.36□□□□□ -2.19
RNF169Q8NCN4 SNORD45B-201ENST00000364617 72 ntBASIC1.36□□□□□ -2.19
RNF169Q8NCN4 SNORD113.3-201ENST00000364630 78 ntBASIC1.36□□□□□ -2.19
RNF169Q8NCN4 Y_RNA.355-201ENST00000365462 98 ntBASIC1.36□□□□□ -2.19
RNF169Q8NCN4 SNORD12-201ENST00000391002 90 ntBASIC1.36□□□□□ -2.19
RNF169Q8NCN4 AL591704.2-201ENST00000421658 181 ntBASIC1.36□□□□□ -2.19
RNF169Q8NCN4 AC004941.2-201ENST00000427009 228 ntBASIC1.36□□□□□ -2.19
RNF169Q8NCN4 MTATP8P2-201ENST00000435212 202 ntBASIC1.36□□□□□ -2.19
RNF169Q8NCN4 RNA5SP170-201ENST00000517150 101 ntBASIC1.36□□□□□ -2.19
RNF169Q8NCN4 AC133485.1-201ENST00000567176 124 ntBASIC1.36□□□□□ -2.19
RNF169Q8NCN4 MIR4439-201ENST00000583746 80 ntBASIC1.36□□□□□ -2.19
RNF169Q8NCN4 AC106800.4-201ENST00000614905 153 ntBASIC1.36□□□□□ -2.19
RNF169Q8NCN4 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.36□□□□□ -2.19
RNF169Q8NCN4 HSBP1P2-201ENST00000299671 229 ntBASIC1.35□□□□□ -2.19
RNF169Q8NCN4 RNU6-170P-201ENST00000362832 104 ntBASIC1.35□□□□□ -2.19
RNF169Q8NCN4 Y_RNA.247-201ENST00000364500 92 ntBASIC1.35□□□□□ -2.19
RNF169Q8NCN4 MIR758-201ENST00000390227 88 ntBASIC1.35□□□□□ -2.19
RNF169Q8NCN4 RNU6-910P-201ENST00000390844 107 ntBASIC1.35□□□□□ -2.19
RNF169Q8NCN4 AC138749.4-201ENST00000563970 127 ntBASIC1.35□□□□□ -2.19
RNF169Q8NCN4 MIR4452-201ENST00000583004 71 ntBASIC1.35□□□□□ -2.19
RNF169Q8NCN4 AC096720.1-201ENST00000604441 183 ntBASIC1.35□□□□□ -2.19
RNF169Q8NCN4 MIR2052-201ENST00000636055 55 ntBASIC1.35□□□□□ -2.19
RNF169Q8NCN4 Y_RNA.43-201ENST00000362670 111 ntBASIC1.34□□□□□ -2.19
RNF169Q8NCN4 SNORD114-22-201ENST00000365423 72 ntBASIC1.34□□□□□ -2.19
RNF169Q8NCN4 SNORA2B-201ENST00000384583 137 ntBASIC1.34□□□□□ -2.19
RNF169Q8NCN4 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.34□□□□□ -2.19
RNF169Q8NCN4 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.34□□□□□ -2.19
RNF169Q8NCN4 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.33□□□□□ -2.2
RNF169Q8NCN4 Y_RNA.95-201ENST00000363079 95 ntBASIC1.33□□□□□ -2.2
RNF169Q8NCN4 Y_RNA.330-201ENST00000365230 109 ntBASIC1.33□□□□□ -2.2
RNF169Q8NCN4 SNORD111-201ENST00000408139 94 ntBASIC1.33□□□□□ -2.2
RNF169Q8NCN4 MRPL35P3-201ENST00000421557 364 ntBASIC1.33□□□□□ -2.2
RNF169Q8NCN4 RPS29P28-201ENST00000446439 141 ntBASIC1.33□□□□□ -2.2
RNF169Q8NCN4 MIR4777-201ENST00000583710 86 ntBASIC1.33□□□□□ -2.2
RNF169Q8NCN4 AC012531.4-201ENST00000616509 177 ntBASIC1.33□□□□□ -2.2
RNF169Q8NCN4 AC091304.10-201ENST00000641554 121 ntBASIC1.33□□□□□ -2.2
RNF169Q8NCN4 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.32□□□□□ -2.2
RNF169Q8NCN4 MIR96-201ENST00000362288 78 ntBASIC1.32□□□□□ -2.2
RNF169Q8NCN4 SNORA25.8-201ENST00000364831 128 ntBASIC1.32□□□□□ -2.2
RNF169Q8NCN4 SNORD38.2-201ENST00000384470 69 ntBASIC1.32□□□□□ -2.2
RNF169Q8NCN4 MIR518E-201ENST00000385252 88 ntBASIC1.32□□□□□ -2.2
RNF169Q8NCN4 Y_RNA.588-201ENST00000391254 102 ntBASIC1.32□□□□□ -2.2
RNF169Q8NCN4 RNU7-90P-201ENST00000459216 62 ntBASIC1.32□□□□□ -2.2
RNF169Q8NCN4 snoU13.21-201ENST00000459368 105 ntBASIC1.32□□□□□ -2.2
RNF169Q8NCN4 Y_RNA.659-201ENST00000515994 113 ntBASIC1.32□□□□□ -2.2
RNF169Q8NCN4 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.31□□□□□ -2.2
RNF169Q8NCN4 RNU6-795P-201ENST00000516323 103 ntBASIC1.31□□□□□ -2.2
RNF169Q8NCN4 SNORA70.22-201ENST00000517160 124 ntBASIC1.31□□□□□ -2.2
RNF169Q8NCN4 AL078603.1-201ENST00000603824 313 ntBASIC1.31□□□□□ -2.2
RNF169Q8NCN4 Y_RNA.96-201ENST00000363092 109 ntBASIC1.3□□□□□ -2.2
RNF169Q8NCN4 RNU1-36P-201ENST00000365130 165 ntBASIC1.3□□□□□ -2.2
RNF169Q8NCN4 MIR548G-201ENST00000408442 89 ntBASIC1.3□□□□□ -2.2
RNF169Q8NCN4 MIR548Z-201ENST00000584743 97 ntBASIC1.3□□□□□ -2.2
RNF169Q8NCN4 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.3□□□□□ -2.2
RNF169Q8NCN4 U6.109-201ENST00000636749 87 ntBASIC1.3□□□□□ -2.2
RNF169Q8NCN4 RNA5SP133-201ENST00000363368 119 ntBASIC1.29□□□□□ -2.2
RNF169Q8NCN4 Y_RNA.173-201ENST00000363776 113 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 177.9 ms