Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2.12□□□□□ -2.07
DEPDC4Q8N2C3 RNA5SP338-201ENST00000410495 85 ntBASIC2.11□□□□□ -2.07
DEPDC4Q8N2C3 RNU4-83P-201ENST00000410863 133 ntBASIC2.11□□□□□ -2.07
DEPDC4Q8N2C3 AC048334.1-201ENST00000477975 159 ntBASIC2.11□□□□□ -2.07
DEPDC4Q8N2C3 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC2.11□□□□□ -2.07
DEPDC4Q8N2C3 MIR548BB-201ENST00000626714 66 ntBASIC2.11□□□□□ -2.07
DEPDC4Q8N2C3 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
DEPDC4Q8N2C3 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
DEPDC4Q8N2C3 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
DEPDC4Q8N2C3 Y_RNA.4-201ENST00000362333 112 ntBASIC2.1□□□□□ -2.07
DEPDC4Q8N2C3 RNU6-519P-201ENST00000410590 108 ntBASIC2.1□□□□□ -2.07
DEPDC4Q8N2C3 BX276092.1-201ENST00000427368 251 ntBASIC2.1□□□□□ -2.07
DEPDC4Q8N2C3 AL591806.2-201ENST00000433122 173 ntBASIC2.1□□□□□ -2.07
DEPDC4Q8N2C3 AC026436.1-201ENST00000510537 270 ntBASIC2.1□□□□□ -2.07
DEPDC4Q8N2C3 MIR514B-201ENST00000516774 80 ntBASIC2.1□□□□□ -2.07
DEPDC4Q8N2C3 MIR6766-201ENST00000622641 72 ntBASIC2.1□□□□□ -2.07
DEPDC4Q8N2C3 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
DEPDC4Q8N2C3 RNA5SP289-201ENST00000362332 137 ntBASIC2.09□□□□□ -2.07
DEPDC4Q8N2C3 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.09□□□□□ -2.07
DEPDC4Q8N2C3 RNU7-185P-201ENST00000459215 60 ntBASIC2.09□□□□□ -2.07
DEPDC4Q8N2C3 AC036111.3-201ENST00000526389 112 ntBASIC2.09□□□□□ -2.07
DEPDC4Q8N2C3 AC006160.2-201ENST00000637708 154 ntBASIC2.09□□□□□ -2.07
DEPDC4Q8N2C3 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
DEPDC4Q8N2C3 RNU6-228P-201ENST00000362700 106 ntBASIC2.08□□□□□ -2.08
DEPDC4Q8N2C3 RNU6-1124P-201ENST00000384169 107 ntBASIC2.08□□□□□ -2.08
DEPDC4Q8N2C3 MIR764-201ENST00000390811 85 ntBASIC2.08□□□□□ -2.08
DEPDC4Q8N2C3 RNU6ATAC6P-201ENST00000408132 126 ntBASIC2.08□□□□□ -2.08
DEPDC4Q8N2C3 SNORD111-201ENST00000408139 94 ntBASIC2.08□□□□□ -2.08
DEPDC4Q8N2C3 MIR1257-201ENST00000408490 117 ntBASIC2.08□□□□□ -2.08
DEPDC4Q8N2C3 RN7SKP223-201ENST00000410582 62 ntBASIC2.08□□□□□ -2.08
DEPDC4Q8N2C3 Y_RNA.611-201ENST00000410682 108 ntBASIC2.08□□□□□ -2.08
DEPDC4Q8N2C3 AL356320.1-201ENST00000429616 163 ntBASIC2.08□□□□□ -2.08
DEPDC4Q8N2C3 Y_RNA.648-201ENST00000459455 110 ntBASIC2.08□□□□□ -2.08
DEPDC4Q8N2C3 SNORA31.2-201ENST00000516019 134 ntBASIC2.08□□□□□ -2.08
DEPDC4Q8N2C3 RNU6-548P-201ENST00000517083 115 ntBASIC2.08□□□□□ -2.08
DEPDC4Q8N2C3 5S_rRNA.15-201ENST00000611169 127 ntBASIC2.08□□□□□ -2.08
DEPDC4Q8N2C3 MIR519C-201ENST00000385053 87 ntBASIC2.07□□□□□ -2.08
DEPDC4Q8N2C3 MIR1289-2-201ENST00000408360 111 ntBASIC2.07□□□□□ -2.08
DEPDC4Q8N2C3 Y_RNA.607-201ENST00000410597 98 ntBASIC2.07□□□□□ -2.08
DEPDC4Q8N2C3 AC087499.7-201ENST00000441958 109 ntBASIC2.07□□□□□ -2.08
DEPDC4Q8N2C3 RNU6-531P-201ENST00000516694 104 ntBASIC2.07□□□□□ -2.08
DEPDC4Q8N2C3 MIR5007-201ENST00000583098 95 ntBASIC2.07□□□□□ -2.08
DEPDC4Q8N2C3 MIR6873-201ENST00000622788 63 ntBASIC2.07□□□□□ -2.08
DEPDC4Q8N2C3 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.06□□□□□ -2.08
DEPDC4Q8N2C3 Y_RNA.191-201ENST00000363972 113 ntBASIC2.06□□□□□ -2.08
DEPDC4Q8N2C3 SNORA75.2-201ENST00000391138 150 ntBASIC2.06□□□□□ -2.08
DEPDC4Q8N2C3 SNORA75.3-201ENST00000391231 150 ntBASIC2.06□□□□□ -2.08
DEPDC4Q8N2C3 RNU6-1254P-201ENST00000391266 104 ntBASIC2.06□□□□□ -2.08
DEPDC4Q8N2C3 AL591704.2-201ENST00000421658 181 ntBASIC2.06□□□□□ -2.08
DEPDC4Q8N2C3 RNA5SP395-201ENST00000516567 118 ntBASIC2.06□□□□□ -2.08
DEPDC4Q8N2C3 SNORA25.16-201ENST00000516741 121 ntBASIC2.06□□□□□ -2.08
DEPDC4Q8N2C3 RNU1-40P-201ENST00000516816 164 ntBASIC2.06□□□□□ -2.08
DEPDC4Q8N2C3 RNU1-97P-201ENST00000516872 164 ntBASIC2.06□□□□□ -2.08
DEPDC4Q8N2C3 RNU6-765P-201ENST00000516916 99 ntBASIC2.06□□□□□ -2.08
DEPDC4Q8N2C3 RNU7-10P-201ENST00000607194 63 ntBASIC2.06□□□□□ -2.08
DEPDC4Q8N2C3 AC106800.4-201ENST00000614905 153 ntBASIC2.06□□□□□ -2.08
DEPDC4Q8N2C3 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.06□□□□□ -2.08
DEPDC4Q8N2C3 AC023934.1-201ENST00000574529 2389 ntBASIC2.06□□□□□ -2.08
DEPDC4Q8N2C3 Y_RNA.330-201ENST00000365230 109 ntBASIC2.05□□□□□ -2.08
DEPDC4Q8N2C3 RNU6-787P-201ENST00000384032 107 ntBASIC2.05□□□□□ -2.08
DEPDC4Q8N2C3 RNU6-717P-201ENST00000459076 104 ntBASIC2.05□□□□□ -2.08
DEPDC4Q8N2C3 SNORD4B-201ENST00000459083 72 ntBASIC2.05□□□□□ -2.08
DEPDC4Q8N2C3 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
DEPDC4Q8N2C3 RNU6-934P-201ENST00000365154 107 ntBASIC2.04□□□□□ -2.08
DEPDC4Q8N2C3 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.04□□□□□ -2.08
DEPDC4Q8N2C3 SNORA80D-201ENST00000384488 135 ntBASIC2.04□□□□□ -2.08
DEPDC4Q8N2C3 RNA5SP247-201ENST00000411181 105 ntBASIC2.04□□□□□ -2.08
DEPDC4Q8N2C3 MIR1273D-201ENST00000577266 86 ntBASIC2.04□□□□□ -2.08
DEPDC4Q8N2C3 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
DEPDC4Q8N2C3 SNORD36A-201ENST00000362874 73 ntBASIC2.03□□□□□ -2.08
DEPDC4Q8N2C3 RNU6-403P-201ENST00000363163 104 ntBASIC2.03□□□□□ -2.08
DEPDC4Q8N2C3 Y_RNA.363-201ENST00000365529 113 ntBASIC2.03□□□□□ -2.08
DEPDC4Q8N2C3 SNORA72.6-201ENST00000384520 129 ntBASIC2.03□□□□□ -2.08
DEPDC4Q8N2C3 RNU7-21P-201ENST00000459430 62 ntBASIC2.03□□□□□ -2.08
DEPDC4Q8N2C3 AC025033.1-201ENST00000463883 194 ntBASIC2.03□□□□□ -2.08
DEPDC4Q8N2C3 RNA5SP364-201ENST00000516938 78 ntBASIC2.03□□□□□ -2.08
DEPDC4Q8N2C3 AC046143.2-201ENST00000609789 160 ntBASIC2.03□□□□□ -2.08
DEPDC4Q8N2C3 MIR6082-201ENST00000613604 109 ntBASIC2.03□□□□□ -2.08
DEPDC4Q8N2C3 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
DEPDC4Q8N2C3 SNORD115-27-201ENST00000364430 82 ntBASIC2.02□□□□□ -2.09
DEPDC4Q8N2C3 MIR221-201ENST00000385135 110 ntBASIC2.02□□□□□ -2.09
DEPDC4Q8N2C3 MIR519A1-201ENST00000385257 85 ntBASIC2.02□□□□□ -2.09
DEPDC4Q8N2C3 SNORA48.3-201ENST00000391081 134 ntBASIC2.02□□□□□ -2.09
DEPDC4Q8N2C3 RNU6-243P-201ENST00000391140 107 ntBASIC2.02□□□□□ -2.09
DEPDC4Q8N2C3 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.02□□□□□ -2.09
DEPDC4Q8N2C3 MIR1236-201ENST00000408340 102 ntBASIC2.02□□□□□ -2.09
DEPDC4Q8N2C3 snoU13.21-201ENST00000459368 105 ntBASIC2.02□□□□□ -2.09
DEPDC4Q8N2C3 AC093729.1-201ENST00000513074 128 ntBASIC2.02□□□□□ -2.09
DEPDC4Q8N2C3 MIR548H5-201ENST00000580314 60 ntBASIC2.02□□□□□ -2.09
DEPDC4Q8N2C3 MIR6132-201ENST00000622083 109 ntBASIC2.02□□□□□ -2.09
DEPDC4Q8N2C3 SNORD114-1-201ENST00000362705 72 ntBASIC2.01□□□□□ -2.09
DEPDC4Q8N2C3 SNORD115-37-201ENST00000363768 82 ntBASIC2.01□□□□□ -2.09
DEPDC4Q8N2C3 RNA5SP99-201ENST00000364020 114 ntBASIC2.01□□□□□ -2.09
DEPDC4Q8N2C3 MIR125B2-201ENST00000385128 89 ntBASIC2.01□□□□□ -2.09
DEPDC4Q8N2C3 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
DEPDC4Q8N2C3 MIR1255A-201ENST00000408338 113 ntBASIC2.01□□□□□ -2.09
DEPDC4Q8N2C3 SNORD83.1-201ENST00000411362 77 ntBASIC2.01□□□□□ -2.09
DEPDC4Q8N2C3 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
DEPDC4Q8N2C3 RNA5SP458-201ENST00000516188 119 ntBASIC2.01□□□□□ -2.09
DEPDC4Q8N2C3 AL161722.3-201ENST00000605789 2983 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 241.3 ms