Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 RNA5SP82-201ENST00000516707 92 ntBASIC2.35□□□□□ -2.03
LYSMD3Q7Z3D4 MIR6516-201ENST00000630554 81 ntBASIC2.35□□□□□ -2.03
LYSMD3Q7Z3D4 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
LYSMD3Q7Z3D4 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
LYSMD3Q7Z3D4 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
LYSMD3Q7Z3D4 SNORD114-30-201ENST00000364448 72 ntBASIC2.34□□□□□ -2.03
LYSMD3Q7Z3D4 RNU6-1241P-201ENST00000384536 107 ntBASIC2.34□□□□□ -2.03
LYSMD3Q7Z3D4 SNORD93-201ENST00000408813 74 ntBASIC2.34□□□□□ -2.03
LYSMD3Q7Z3D4 AL356320.1-201ENST00000429616 163 ntBASIC2.34□□□□□ -2.03
LYSMD3Q7Z3D4 snoU13.26-201ENST00000459452 105 ntBASIC2.34□□□□□ -2.03
LYSMD3Q7Z3D4 NEAT1_2.1-201ENST00000620525 105 ntBASIC2.34□□□□□ -2.03
LYSMD3Q7Z3D4 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.34□□□□□ -2.03
LYSMD3Q7Z3D4 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
LYSMD3Q7Z3D4 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
LYSMD3Q7Z3D4 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.34□□□□□ -2.04
LYSMD3Q7Z3D4 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
LYSMD3Q7Z3D4 Y_RNA.205-201ENST00000364128 113 ntBASIC2.33□□□□□ -2.04
LYSMD3Q7Z3D4 RNU6-439P-201ENST00000384188 106 ntBASIC2.33□□□□□ -2.04
LYSMD3Q7Z3D4 SNORD100-201ENST00000408573 76 ntBASIC2.33□□□□□ -2.04
LYSMD3Q7Z3D4 RNU7-195P-201ENST00000458793 62 ntBASIC2.33□□□□□ -2.04
LYSMD3Q7Z3D4 RNU6-947P-201ENST00000516264 106 ntBASIC2.33□□□□□ -2.04
LYSMD3Q7Z3D4 GHRLOS.1-201ENST00000610995 70 ntBASIC2.33□□□□□ -2.04
LYSMD3Q7Z3D4 VPS35-212ENST00000640313 141 ntTSL 5 BASIC2.33□□□□□ -2.04
LYSMD3Q7Z3D4 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.33□□□□□ -2.04
LYSMD3Q7Z3D4 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.33□□□□□ -2.04
LYSMD3Q7Z3D4 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.32□□□□□ -2.04
LYSMD3Q7Z3D4 RNU6-1051P-201ENST00000365471 102 ntBASIC2.32□□□□□ -2.04
LYSMD3Q7Z3D4 SNORA8.1-201ENST00000384250 140 ntBASIC2.32□□□□□ -2.04
LYSMD3Q7Z3D4 RNU6-800P-201ENST00000384473 103 ntBASIC2.32□□□□□ -2.04
LYSMD3Q7Z3D4 MIR154-201ENST00000385243 84 ntBASIC2.32□□□□□ -2.04
LYSMD3Q7Z3D4 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.32□□□□□ -2.04
LYSMD3Q7Z3D4 TRAJ51-201ENST00000504127 63 ntBASIC2.32□□□□□ -2.04
LYSMD3Q7Z3D4 RNU6-250P-201ENST00000516958 103 ntBASIC2.32□□□□□ -2.04
LYSMD3Q7Z3D4 AP003716.2-201ENST00000528260 108 ntBASIC2.32□□□□□ -2.04
LYSMD3Q7Z3D4 U6.111-201ENST00000636093 83 ntBASIC2.32□□□□□ -2.04
LYSMD3Q7Z3D4 AC131280.1-202ENST00000624067 4211 ntBASIC2.32□□□□□ -2.04
LYSMD3Q7Z3D4 MIR377-201ENST00000362145 69 ntBASIC2.31□□□□□ -2.04
LYSMD3Q7Z3D4 Y_RNA.36-201ENST00000362602 112 ntBASIC2.31□□□□□ -2.04
LYSMD3Q7Z3D4 RNU6-330P-201ENST00000363015 107 ntBASIC2.31□□□□□ -2.04
LYSMD3Q7Z3D4 RNU6-403P-201ENST00000363163 104 ntBASIC2.31□□□□□ -2.04
LYSMD3Q7Z3D4 RNU1-36P-201ENST00000365130 165 ntBASIC2.31□□□□□ -2.04
LYSMD3Q7Z3D4 SNORD115-31-201ENST00000365318 82 ntBASIC2.31□□□□□ -2.04
LYSMD3Q7Z3D4 SNORA6-201ENST00000384033 151 ntBASIC2.31□□□□□ -2.04
LYSMD3Q7Z3D4 RNU1-52P-201ENST00000384190 164 ntBASIC2.31□□□□□ -2.04
LYSMD3Q7Z3D4 Y_RNA.536-201ENST00000384621 113 ntBASIC2.31□□□□□ -2.04
LYSMD3Q7Z3D4 MIR504-201ENST00000385065 83 ntBASIC2.31□□□□□ -2.04
LYSMD3Q7Z3D4 MIR524-201ENST00000385242 87 ntBASIC2.31□□□□□ -2.04
LYSMD3Q7Z3D4 MIR1185-1-201ENST00000408598 86 ntBASIC2.31□□□□□ -2.04
LYSMD3Q7Z3D4 snoU13.15-201ENST00000459407 104 ntBASIC2.31□□□□□ -2.04
LYSMD3Q7Z3D4 RNU11-2P-201ENST00000516898 142 ntBASIC2.31□□□□□ -2.04
LYSMD3Q7Z3D4 MIR5007-201ENST00000583098 95 ntBASIC2.31□□□□□ -2.04
LYSMD3Q7Z3D4 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.3□□□□□ -2.04
LYSMD3Q7Z3D4 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
LYSMD3Q7Z3D4 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
LYSMD3Q7Z3D4 RNA5SP432-201ENST00000362480 116 ntBASIC2.3□□□□□ -2.04
LYSMD3Q7Z3D4 RNU6-654P-201ENST00000364373 107 ntBASIC2.3□□□□□ -2.04
LYSMD3Q7Z3D4 RNA5SP95-201ENST00000410319 137 ntBASIC2.3□□□□□ -2.04
LYSMD3Q7Z3D4 AL606490.4-201ENST00000423117 127 ntBASIC2.3□□□□□ -2.04
LYSMD3Q7Z3D4 MIR4648-201ENST00000580107 72 ntBASIC2.3□□□□□ -2.04
LYSMD3Q7Z3D4 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
LYSMD3Q7Z3D4 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
LYSMD3Q7Z3D4 Y_RNA.42-201ENST00000362660 108 ntBASIC2.29□□□□□ -2.04
LYSMD3Q7Z3D4 Y_RNA.207-201ENST00000364142 106 ntBASIC2.29□□□□□ -2.04
LYSMD3Q7Z3D4 SNORA67.1-201ENST00000364749 141 ntBASIC2.29□□□□□ -2.04
LYSMD3Q7Z3D4 RNU6-154P-201ENST00000384306 106 ntBASIC2.29□□□□□ -2.04
LYSMD3Q7Z3D4 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
LYSMD3Q7Z3D4 MIR942-201ENST00000401111 86 ntBASIC2.29□□□□□ -2.04
LYSMD3Q7Z3D4 MIR18B-201ENST00000454574 71 ntBASIC2.29□□□□□ -2.04
LYSMD3Q7Z3D4 AL133373.1-201ENST00000497098 94 ntBASIC2.29□□□□□ -2.04
LYSMD3Q7Z3D4 RNU2-19P-201ENST00000517288 84 ntBASIC2.29□□□□□ -2.04
LYSMD3Q7Z3D4 AC013244.2-201ENST00000603396 103 ntBASIC2.29□□□□□ -2.04
LYSMD3Q7Z3D4 TRDV1-202ENST00000621643 102 ntBASIC2.29□□□□□ -2.04
LYSMD3Q7Z3D4 MIR6766-201ENST00000622641 72 ntBASIC2.29□□□□□ -2.04
LYSMD3Q7Z3D4 MIR101-2-201ENST00000362195 79 ntBASIC2.28□□□□□ -2.04
LYSMD3Q7Z3D4 Y_RNA.239-201ENST00000364444 113 ntBASIC2.28□□□□□ -2.04
LYSMD3Q7Z3D4 RNU6-580P-201ENST00000365159 107 ntBASIC2.28□□□□□ -2.04
LYSMD3Q7Z3D4 Y_RNA.371-201ENST00000365591 113 ntBASIC2.28□□□□□ -2.04
LYSMD3Q7Z3D4 MIR519A1-201ENST00000385257 85 ntBASIC2.28□□□□□ -2.04
LYSMD3Q7Z3D4 RNU6-663P-201ENST00000391105 106 ntBASIC2.28□□□□□ -2.04
LYSMD3Q7Z3D4 RN7SKP223-201ENST00000410582 62 ntBASIC2.28□□□□□ -2.04
LYSMD3Q7Z3D4 MIR1273D-201ENST00000577266 86 ntBASIC2.28□□□□□ -2.04
LYSMD3Q7Z3D4 AC015688.6-201ENST00000577737 104 ntBASIC2.28□□□□□ -2.04
LYSMD3Q7Z3D4 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.28□□□□□ -2.04
LYSMD3Q7Z3D4 MIR7843-201ENST00000622274 79 ntBASIC2.28□□□□□ -2.04
LYSMD3Q7Z3D4 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.28□□□□□ -2.04
LYSMD3Q7Z3D4 ZNF209P-201ENST00000593450 2304 ntBASIC2.28□□□□□ -2.05
LYSMD3Q7Z3D4 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
LYSMD3Q7Z3D4 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
LYSMD3Q7Z3D4 RNA5SP276-201ENST00000362580 94 ntBASIC2.27□□□□□ -2.05
LYSMD3Q7Z3D4 RNU6-291P-201ENST00000384720 107 ntBASIC2.27□□□□□ -2.05
LYSMD3Q7Z3D4 MIR144-201ENST00000384886 86 ntBASIC2.27□□□□□ -2.05
LYSMD3Q7Z3D4 AC079804.2-201ENST00000490376 200 ntBASIC2.27□□□□□ -2.05
LYSMD3Q7Z3D4 Y_RNA.809-201ENST00000516058 95 ntBASIC2.27□□□□□ -2.05
LYSMD3Q7Z3D4 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.27□□□□□ -2.05
LYSMD3Q7Z3D4 MIR548H5-201ENST00000580314 60 ntBASIC2.27□□□□□ -2.05
LYSMD3Q7Z3D4 SNRPGP19-201ENST00000603826 189 ntBASIC2.27□□□□□ -2.05
LYSMD3Q7Z3D4 AC245884.12-201ENST00000615364 59 ntBASIC2.27□□□□□ -2.05
LYSMD3Q7Z3D4 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
LYSMD3Q7Z3D4 MIR103A2-201ENST00000362154 78 ntBASIC2.26□□□□□ -2.05
LYSMD3Q7Z3D4 RNA5SP264-201ENST00000363115 107 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 170.2 ms