Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 MT-TH-201ENST00000387441 69 ntBASIC-1.35□□□□□ -2.63
CSPG4Q6UVK1 RNU6-308P-201ENST00000390957 107 ntBASIC-1.35□□□□□ -2.63
CSPG4Q6UVK1 snoU109.3-201ENST00000459477 145 ntBASIC-1.35□□□□□ -2.63
CSPG4Q6UVK1 MIR376B-201ENST00000614515 100 ntBASIC-1.35□□□□□ -2.63
CSPG4Q6UVK1 AC007485.1-201ENST00000616755 206 ntBASIC-1.35□□□□□ -2.63
CSPG4Q6UVK1 AC087741.2-201ENST00000619415 172 ntBASIC-1.35□□□□□ -2.63
CSPG4Q6UVK1 RNU6-495P-201ENST00000362995 107 ntBASIC-1.35□□□□□ -2.63
CSPG4Q6UVK1 RNU6-774P-201ENST00000363238 107 ntBASIC-1.35□□□□□ -2.63
CSPG4Q6UVK1 Y_RNA.424-201ENST00000384063 103 ntBASIC-1.35□□□□□ -2.63
CSPG4Q6UVK1 MIR451A-201ENST00000385059 72 ntBASIC-1.35□□□□□ -2.63
CSPG4Q6UVK1 PMCHL1-202ENST00000423102 261 ntBASIC-1.35□□□□□ -2.63
CSPG4Q6UVK1 AC024067.1-201ENST00000426199 223 ntBASIC-1.35□□□□□ -2.63
CSPG4Q6UVK1 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC-1.35□□□□□ -2.63
CSPG4Q6UVK1 MIR2053-201ENST00000459295 91 ntBASIC-1.35□□□□□ -2.63
CSPG4Q6UVK1 ZNF519P2-201ENST00000557032 169 ntBASIC-1.35□□□□□ -2.63
CSPG4Q6UVK1 MTND3P12-201ENST00000559068 328 ntBASIC-1.35□□□□□ -2.63
CSPG4Q6UVK1 MIR6128-201ENST00000615528 109 ntBASIC-1.35□□□□□ -2.63
CSPG4Q6UVK1 TPTEP1-208ENST00000636884 213 ntBASIC-1.35□□□□□ -2.63
CSPG4Q6UVK1 Y_RNA.372-201ENST00000365599 102 ntBASIC-1.36□□□□□ -2.63
CSPG4Q6UVK1 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.36□□□□□ -2.63
CSPG4Q6UVK1 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.36□□□□□ -2.63
CSPG4Q6UVK1 Y_RNA.511-201ENST00000384514 103 ntBASIC-1.36□□□□□ -2.63
CSPG4Q6UVK1 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-1.36□□□□□ -2.63
CSPG4Q6UVK1 RNU7-106P-201ENST00000459514 67 ntBASIC-1.36□□□□□ -2.63
CSPG4Q6UVK1 Y_RNA.3-201ENST00000362331 103 ntBASIC-1.37□□□□□ -2.63
CSPG4Q6UVK1 RNU6-845P-201ENST00000362578 103 ntBASIC-1.37□□□□□ -2.63
CSPG4Q6UVK1 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.37□□□□□ -2.63
CSPG4Q6UVK1 RNY3P11-201ENST00000364153 102 ntBASIC-1.37□□□□□ -2.63
CSPG4Q6UVK1 Y_RNA.212-201ENST00000364177 102 ntBASIC-1.37□□□□□ -2.63
CSPG4Q6UVK1 RNU6-102P-201ENST00000384485 104 ntBASIC-1.37□□□□□ -2.63
CSPG4Q6UVK1 RNU6-695P-201ENST00000391157 104 ntBASIC-1.37□□□□□ -2.63
CSPG4Q6UVK1 AL353193.1-201ENST00000421444 268 ntBASIC-1.37□□□□□ -2.63
CSPG4Q6UVK1 AL009048.1-201ENST00000450437 298 ntBASIC-1.37□□□□□ -2.63
CSPG4Q6UVK1 AC107399.1-201ENST00000451226 265 ntBASIC-1.37□□□□□ -2.63
CSPG4Q6UVK1 RNU2-35P-201ENST00000516446 142 ntBASIC-1.37□□□□□ -2.63
CSPG4Q6UVK1 RNU6-762P-201ENST00000517107 102 ntBASIC-1.37□□□□□ -2.63
CSPG4Q6UVK1 SNORA32-201ENST00000384072 121 ntBASIC-1.37□□□□□ -2.63
CSPG4Q6UVK1 Y_RNA.482-201ENST00000384377 111 ntBASIC-1.37□□□□□ -2.63
CSPG4Q6UVK1 MIR1255B2-201ENST00000408618 67 ntBASIC-1.37□□□□□ -2.63
CSPG4Q6UVK1 RNU6-1068P-201ENST00000410958 103 ntBASIC-1.37□□□□□ -2.63
CSPG4Q6UVK1 RNU7-24P-201ENST00000458867 62 ntBASIC-1.37□□□□□ -2.63
CSPG4Q6UVK1 RNU6-566P-201ENST00000516790 107 ntBASIC-1.37□□□□□ -2.63
CSPG4Q6UVK1 MIR6863-201ENST00000636112 90 ntBASIC-1.37□□□□□ -2.63
CSPG4Q6UVK1 AC068137.3-201ENST00000639191 341 ntBASIC-1.37□□□□□ -2.63
CSPG4Q6UVK1 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.38□□□□□ -2.63
CSPG4Q6UVK1 RNU6-879P-201ENST00000364328 108 ntBASIC-1.38□□□□□ -2.63
CSPG4Q6UVK1 RNU4-10P-201ENST00000364383 140 ntBASIC-1.38□□□□□ -2.63
CSPG4Q6UVK1 RNU6-728P-201ENST00000365375 104 ntBASIC-1.38□□□□□ -2.63
CSPG4Q6UVK1 RNU6-636P-201ENST00000384598 107 ntBASIC-1.38□□□□□ -2.63
CSPG4Q6UVK1 RNU6-400P-201ENST00000391173 106 ntBASIC-1.38□□□□□ -2.63
CSPG4Q6UVK1 RNU6-1050P-201ENST00000410388 107 ntBASIC-1.38□□□□□ -2.63
CSPG4Q6UVK1 SNORA19.1-201ENST00000410656 129 ntBASIC-1.38□□□□□ -2.63
CSPG4Q6UVK1 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.38□□□□□ -2.63
CSPG4Q6UVK1 RNU6-719P-201ENST00000516671 104 ntBASIC-1.38□□□□□ -2.63
CSPG4Q6UVK1 AC138907.4-201ENST00000570107 226 ntBASIC-1.38□□□□□ -2.63
CSPG4Q6UVK1 MIR4696-201ENST00000581431 70 ntBASIC-1.38□□□□□ -2.63
CSPG4Q6UVK1 MIR376A2-201ENST00000636782 80 ntBASIC-1.38□□□□□ -2.63
CSPG4Q6UVK1 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.38□□□□□ -2.63
CSPG4Q6UVK1 Y_RNA.404-201ENST00000383978 102 ntBASIC-1.38□□□□□ -2.63
CSPG4Q6UVK1 RNU7-154P-201ENST00000516194 62 ntBASIC-1.38□□□□□ -2.63
CSPG4Q6UVK1 AC006006.1-201ENST00000603082 144 ntBASIC-1.38□□□□□ -2.63
CSPG4Q6UVK1 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.38□□□□□ -2.63
CSPG4Q6UVK1 MIR548O2-201ENST00000616090 70 ntBASIC-1.38□□□□□ -2.63
CSPG4Q6UVK1 FGF7P2-201ENST00000332473 296 ntBASIC-1.39□□□□□ -2.63
CSPG4Q6UVK1 RNU6-1205P-201ENST00000363625 106 ntBASIC-1.39□□□□□ -2.63
CSPG4Q6UVK1 FGF7P6-202ENST00000451282 293 ntBASIC-1.39□□□□□ -2.63
CSPG4Q6UVK1 AC144568.1-201ENST00000520139 137 ntBASIC-1.39□□□□□ -2.63
CSPG4Q6UVK1 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.39□□□□□ -2.63
CSPG4Q6UVK1 AC090616.4-201ENST00000448026 115 ntBASIC-1.39□□□□□ -2.63
CSPG4Q6UVK1 MTND2P39-201ENST00000457230 764 ntBASIC-1.39□□□□□ -2.63
CSPG4Q6UVK1 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.39□□□□□ -2.63
CSPG4Q6UVK1 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.39□□□□□ -2.63
CSPG4Q6UVK1 TRDV1-202ENST00000621643 102 ntBASIC-1.39□□□□□ -2.63
CSPG4Q6UVK1 Y_RNA.76-201ENST00000362931 109 ntBASIC-1.4□□□□□ -2.63
CSPG4Q6UVK1 RNU6-888P-201ENST00000363010 101 ntBASIC-1.4□□□□□ -2.63
CSPG4Q6UVK1 RNU6-80P-201ENST00000384195 107 ntBASIC-1.4□□□□□ -2.63
CSPG4Q6UVK1 RNU6-21P-201ENST00000384710 107 ntBASIC-1.4□□□□□ -2.63
CSPG4Q6UVK1 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.4□□□□□ -2.63
CSPG4Q6UVK1 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC-1.4□□□□□ -2.63
CSPG4Q6UVK1 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-1.4□□□□□ -2.63
CSPG4Q6UVK1 RNU7-2P-201ENST00000516096 62 ntBASIC-1.4□□□□□ -2.63
CSPG4Q6UVK1 AL022161.1-201ENST00000604390 213 ntBASIC-1.4□□□□□ -2.63
CSPG4Q6UVK1 RNU6-194P-201ENST00000363862 105 ntBASIC-1.4□□□□□ -2.63
CSPG4Q6UVK1 Y_RNA.230-201ENST00000364348 109 ntBASIC-1.4□□□□□ -2.63
CSPG4Q6UVK1 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.4□□□□□ -2.63
CSPG4Q6UVK1 RNU6-1228P-201ENST00000391014 107 ntBASIC-1.4□□□□□ -2.63
CSPG4Q6UVK1 MTATP6P19-201ENST00000413797 659 ntBASIC-1.4□□□□□ -2.63
CSPG4Q6UVK1 AL035461.1-201ENST00000421490 332 ntBASIC-1.4□□□□□ -2.63
CSPG4Q6UVK1 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC-1.4□□□□□ -2.63
CSPG4Q6UVK1 SEPT14P4-201ENST00000513445 186 ntBASIC-1.4□□□□□ -2.63
CSPG4Q6UVK1 RNU6-256P-201ENST00000516747 97 ntBASIC-1.4□□□□□ -2.63
CSPG4Q6UVK1 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-1.4□□□□□ -2.63
CSPG4Q6UVK1 AC120024.2-201ENST00000576526 175 ntBASIC-1.4□□□□□ -2.63
CSPG4Q6UVK1 AC108081.1-201ENST00000604358 221 ntBASIC-1.4□□□□□ -2.63
CSPG4Q6UVK1 RNU6-1252P-201ENST00000363054 104 ntBASIC-1.41□□□□□ -2.64
CSPG4Q6UVK1 Y_RNA.396-201ENST00000383949 103 ntBASIC-1.41□□□□□ -2.64
CSPG4Q6UVK1 ELOCP20-201ENST00000422460 345 ntBASIC-1.41□□□□□ -2.64
CSPG4Q6UVK1 Y_RNA.677-201ENST00000516401 85 ntBASIC-1.41□□□□□ -2.64
CSPG4Q6UVK1 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC-1.41□□□□□ -2.64
CSPG4Q6UVK1 U6.92-201ENST00000636464 89 ntBASIC-1.41□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms