Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.97□□□□□ -2.09
PCDH1Q08174 AL627230.6-201ENST00000611129 280 ntBASIC1.97□□□□□ -2.09
PCDH1Q08174 RNA5SP99-201ENST00000364020 114 ntBASIC1.96□□□□□ -2.1
PCDH1Q08174 SNORD115-27-201ENST00000364430 82 ntBASIC1.96□□□□□ -2.1
PCDH1Q08174 RNU6-580P-201ENST00000365159 107 ntBASIC1.96□□□□□ -2.1
PCDH1Q08174 RNU6-519P-201ENST00000410590 108 ntBASIC1.96□□□□□ -2.1
PCDH1Q08174 BX276092.1-201ENST00000427368 251 ntBASIC1.96□□□□□ -2.1
PCDH1Q08174 AC108210.2-201ENST00000503681 201 ntBASIC1.96□□□□□ -2.1
PCDH1Q08174 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.96□□□□□ -2.1
PCDH1Q08174 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
PCDH1Q08174 RNA5SP160-201ENST00000364866 120 ntBASIC1.95□□□□□ -2.1
PCDH1Q08174 Y_RNA.313-201ENST00000365095 103 ntBASIC1.95□□□□□ -2.1
PCDH1Q08174 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
PCDH1Q08174 MIR764-201ENST00000390811 85 ntBASIC1.95□□□□□ -2.1
PCDH1Q08174 AL591806.2-201ENST00000433122 173 ntBASIC1.95□□□□□ -2.1
PCDH1Q08174 MIR18B-201ENST00000454574 71 ntBASIC1.95□□□□□ -2.1
PCDH1Q08174 snoU13.23-201ENST00000458863 104 ntBASIC1.95□□□□□ -2.1
PCDH1Q08174 RNU6-165P-201ENST00000517170 99 ntBASIC1.95□□□□□ -2.1
PCDH1Q08174 MIR5089-201ENST00000580047 84 ntBASIC1.95□□□□□ -2.1
PCDH1Q08174 AL161722.3-201ENST00000605789 2983 ntBASIC1.94□□□□□ -2.1
PCDH1Q08174 SNORA64-201ENST00000384674 134 ntBASIC1.94□□□□□ -2.1
PCDH1Q08174 Y_RNA.607-201ENST00000410597 98 ntBASIC1.94□□□□□ -2.1
PCDH1Q08174 AL096840.1-201ENST00000603287 93 ntBASIC1.94□□□□□ -2.1
PCDH1Q08174 SNORD114-1-201ENST00000362705 72 ntBASIC1.93□□□□□ -2.1
PCDH1Q08174 MIR519C-201ENST00000385053 87 ntBASIC1.93□□□□□ -2.1
PCDH1Q08174 AC087499.7-201ENST00000441958 109 ntBASIC1.93□□□□□ -2.1
PCDH1Q08174 RPL23AP42-201ENST00000471152 471 ntBASIC1.93□□□□□ -2.1
PCDH1Q08174 AL512310.8-201ENST00000550183 120 ntBASIC1.93□□□□□ -2.1
PCDH1Q08174 AC015712.3-201ENST00000559380 164 ntBASIC1.93□□□□□ -2.1
PCDH1Q08174 MIR3198-2-201ENST00000577868 80 ntBASIC1.93□□□□□ -2.1
PCDH1Q08174 MIR4491-201ENST00000581087 68 ntBASIC1.93□□□□□ -2.1
PCDH1Q08174 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.93□□□□□ -2.1
PCDH1Q08174 RNU6-53P-201ENST00000365367 106 ntBASIC1.92□□□□□ -2.1
PCDH1Q08174 RNU6-279P-201ENST00000391297 101 ntBASIC1.92□□□□□ -2.1
PCDH1Q08174 SNORD93-201ENST00000408813 74 ntBASIC1.92□□□□□ -2.1
PCDH1Q08174 HMGN2P19-201ENST00000425149 265 ntBASIC1.92□□□□□ -2.1
PCDH1Q08174 AL512598.1-201ENST00000610158 273 ntBASIC1.92□□□□□ -2.1
PCDH1Q08174 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.92□□□□□ -2.1
PCDH1Q08174 RNU6-524P-201ENST00000384270 107 ntBASIC1.91□□□□□ -2.1
PCDH1Q08174 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
PCDH1Q08174 MIR676-201ENST00000390702 67 ntBASIC1.91□□□□□ -2.1
PCDH1Q08174 Y_RNA.588-201ENST00000391254 102 ntBASIC1.91□□□□□ -2.1
PCDH1Q08174 SUMO2P12-201ENST00000405924 140 ntBASIC1.91□□□□□ -2.1
PCDH1Q08174 SNORA25.16-201ENST00000516741 121 ntBASIC1.91□□□□□ -2.1
PCDH1Q08174 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.91□□□□□ -2.1
PCDH1Q08174 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.91□□□□□ -2.1
PCDH1Q08174 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
PCDH1Q08174 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
PCDH1Q08174 RNU4-58P-201ENST00000363192 141 ntBASIC1.9□□□□□ -2.11
PCDH1Q08174 RNU1-36P-201ENST00000365130 165 ntBASIC1.9□□□□□ -2.11
PCDH1Q08174 RNU6-482P-201ENST00000391068 107 ntBASIC1.9□□□□□ -2.11
PCDH1Q08174 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
PCDH1Q08174 RNU6-531P-201ENST00000516694 104 ntBASIC1.9□□□□□ -2.11
PCDH1Q08174 AC012493.3-201ENST00000604494 112 ntBASIC1.9□□□□□ -2.11
PCDH1Q08174 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
PCDH1Q08174 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.89□□□□□ -2.11
PCDH1Q08174 SNORD115-37-201ENST00000363768 82 ntBASIC1.89□□□□□ -2.11
PCDH1Q08174 RNU6-652P-201ENST00000365488 107 ntBASIC1.89□□□□□ -2.11
PCDH1Q08174 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.89□□□□□ -2.11
PCDH1Q08174 RNU6-1054P-201ENST00000411293 104 ntBASIC1.89□□□□□ -2.11
PCDH1Q08174 SNORD4B-201ENST00000459083 72 ntBASIC1.89□□□□□ -2.11
PCDH1Q08174 Y_RNA.648-201ENST00000459455 110 ntBASIC1.89□□□□□ -2.11
PCDH1Q08174 AC093729.1-201ENST00000513074 128 ntBASIC1.89□□□□□ -2.11
PCDH1Q08174 RNU6-548P-201ENST00000517083 115 ntBASIC1.89□□□□□ -2.11
PCDH1Q08174 RNU6-403P-201ENST00000363163 104 ntBASIC1.88□□□□□ -2.11
PCDH1Q08174 SNORA72.6-201ENST00000384520 129 ntBASIC1.88□□□□□ -2.11
PCDH1Q08174 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.88□□□□□ -2.11
PCDH1Q08174 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.88□□□□□ -2.11
PCDH1Q08174 Y_RNA.783-201ENST00000613546 102 ntBASIC1.88□□□□□ -2.11
PCDH1Q08174 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.88□□□□□ -2.11
PCDH1Q08174 AC023934.1-201ENST00000574529 2389 ntBASIC1.87□□□□□ -2.11
PCDH1Q08174 Y_RNA.316-201ENST00000365118 111 ntBASIC1.87□□□□□ -2.11
PCDH1Q08174 Y_RNA.330-201ENST00000365230 109 ntBASIC1.87□□□□□ -2.11
PCDH1Q08174 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
PCDH1Q08174 RNU1-78P-201ENST00000391248 165 ntBASIC1.87□□□□□ -2.11
PCDH1Q08174 RNU7-85P-201ENST00000458851 63 ntBASIC1.87□□□□□ -2.11
PCDH1Q08174 AC048334.1-201ENST00000477975 159 ntBASIC1.87□□□□□ -2.11
PCDH1Q08174 AC023790.1-201ENST00000482174 347 ntBASIC1.87□□□□□ -2.11
PCDH1Q08174 RNU6-857P-201ENST00000515893 110 ntBASIC1.87□□□□□ -2.11
PCDH1Q08174 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.87□□□□□ -2.11
PCDH1Q08174 Y_RNA.244-201ENST00000364484 109 ntBASIC1.86□□□□□ -2.11
PCDH1Q08174 MIR516A2-201ENST00000384888 90 ntBASIC1.86□□□□□ -2.11
PCDH1Q08174 MIR516A1-201ENST00000385033 90 ntBASIC1.86□□□□□ -2.11
PCDH1Q08174 RNU6-1254P-201ENST00000391266 104 ntBASIC1.86□□□□□ -2.11
PCDH1Q08174 MIR1236-201ENST00000408340 102 ntBASIC1.86□□□□□ -2.11
PCDH1Q08174 MIR1257-201ENST00000408490 117 ntBASIC1.86□□□□□ -2.11
PCDH1Q08174 RPS27P16-201ENST00000425758 201 ntBASIC1.86□□□□□ -2.11
PCDH1Q08174 RNU7-185P-201ENST00000459215 60 ntBASIC1.86□□□□□ -2.11
PCDH1Q08174 snoU13.21-201ENST00000459368 105 ntBASIC1.86□□□□□ -2.11
PCDH1Q08174 RN7SKP88-201ENST00000516847 250 ntBASIC1.86□□□□□ -2.11
PCDH1Q08174 7SK.8-201ENST00000612110 250 ntBASIC1.86□□□□□ -2.11
PCDH1Q08174 7SK.11-201ENST00000615477 250 ntBASIC1.86□□□□□ -2.11
PCDH1Q08174 7SK.13-201ENST00000622040 250 ntBASIC1.86□□□□□ -2.11
PCDH1Q08174 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
PCDH1Q08174 SNORD36A-201ENST00000362874 73 ntBASIC1.85□□□□□ -2.11
PCDH1Q08174 RNU4-32P-201ENST00000363404 141 ntBASIC1.85□□□□□ -2.11
PCDH1Q08174 SNORD113.3-201ENST00000364630 78 ntBASIC1.85□□□□□ -2.11
PCDH1Q08174 AC008834.1-201ENST00000511612 175 ntBASIC1.85□□□□□ -2.11
PCDH1Q08174 AL353997.5-201ENST00000618886 171 ntBASIC1.85□□□□□ -2.11
PCDH1Q08174 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms