Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 MIR3123-201ENST00000583417 75 ntBASIC-0.84□□□□□ -2.54
HSPG2P98160 U6.100-201ENST00000636230 99 ntBASIC-0.84□□□□□ -2.54
HSPG2P98160 RNU6-1034P-201ENST00000365335 101 ntBASIC-0.84□□□□□ -2.54
HSPG2P98160 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.84□□□□□ -2.54
HSPG2P98160 Y_RNA.513-201ENST00000384522 100 ntBASIC-0.84□□□□□ -2.54
HSPG2P98160 Y_RNA.528-201ENST00000384575 108 ntBASIC-0.84□□□□□ -2.54
HSPG2P98160 RNU6-559P-201ENST00000516151 98 ntBASIC-0.84□□□□□ -2.54
HSPG2P98160 AC022079.1-201ENST00000621546 602 ntBASIC-0.84□□□□□ -2.54
HSPG2P98160 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.84□□□□□ -2.54
HSPG2P98160 Y_RNA.39-201ENST00000362620 98 ntBASIC-0.84□□□□□ -2.54
HSPG2P98160 Y_RNA.103-201ENST00000363171 102 ntBASIC-0.84□□□□□ -2.54
HSPG2P98160 Y_RNA.175-201ENST00000363794 111 ntBASIC-0.84□□□□□ -2.54
HSPG2P98160 Y_RNA.257-201ENST00000364596 102 ntBASIC-0.84□□□□□ -2.54
HSPG2P98160 MIR624-201ENST00000385217 97 ntBASIC-0.84□□□□□ -2.54
HSPG2P98160 RNU6-763P-201ENST00000390865 106 ntBASIC-0.84□□□□□ -2.54
HSPG2P98160 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.84□□□□□ -2.54
HSPG2P98160 MIR3145-201ENST00000580727 82 ntBASIC-0.84□□□□□ -2.54
HSPG2P98160 AP000240.1-201ENST00000609910 452 ntBASIC-0.84□□□□□ -2.54
HSPG2P98160 TRDV1-202ENST00000621643 102 ntBASIC-0.84□□□□□ -2.54
HSPG2P98160 Y_RNA.212-201ENST00000364177 102 ntBASIC-0.85□□□□□ -2.54
HSPG2P98160 RNU6-522P-201ENST00000364497 107 ntBASIC-0.85□□□□□ -2.54
HSPG2P98160 RNU6-191P-201ENST00000516295 94 ntBASIC-0.85□□□□□ -2.54
HSPG2P98160 AC103591.3-201ENST00000608684 209 ntBASIC-0.85□□□□□ -2.54
HSPG2P98160 Y_RNA.3-201ENST00000362331 103 ntBASIC-0.85□□□□□ -2.55
HSPG2P98160 Y_RNA.542-201ENST00000384641 111 ntBASIC-0.85□□□□□ -2.55
HSPG2P98160 RNU6-1242P-201ENST00000391052 103 ntBASIC-0.85□□□□□ -2.55
HSPG2P98160 AC113618.1-201ENST00000416747 285 ntBASIC-0.85□□□□□ -2.55
HSPG2P98160 AF228730.3-201ENST00000436691 102 ntBASIC-0.85□□□□□ -2.55
HSPG2P98160 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.85□□□□□ -2.55
HSPG2P98160 MIR4724-201ENST00000579485 89 ntBASIC-0.85□□□□□ -2.55
HSPG2P98160 AC090617.10-201ENST00000624308 134 ntBASIC-0.85□□□□□ -2.55
HSPG2P98160 Y_RNA.373-201ENST00000365600 103 ntBASIC-0.85□□□□□ -2.55
HSPG2P98160 Y_RNA.397-201ENST00000383950 98 ntBASIC-0.85□□□□□ -2.55
HSPG2P98160 RNU6-906P-201ENST00000384700 70 ntBASIC-0.85□□□□□ -2.55
HSPG2P98160 Y_RNA.618-201ENST00000410949 107 ntBASIC-0.85□□□□□ -2.55
HSPG2P98160 snoU109.3-201ENST00000459477 145 ntBASIC-0.85□□□□□ -2.55
HSPG2P98160 RPS29P25-201ENST00000481709 171 ntBASIC-0.85□□□□□ -2.55
HSPG2P98160 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC-0.85□□□□□ -2.55
HSPG2P98160 SNORA18.6-201ENST00000516792 115 ntBASIC-0.85□□□□□ -2.55
HSPG2P98160 RNU7-110P-201ENST00000516891 62 ntBASIC-0.85□□□□□ -2.55
HSPG2P98160 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-0.85□□□□□ -2.55
HSPG2P98160 Y_RNA.443-201ENST00000384135 111 ntBASIC-0.85□□□□□ -2.55
HSPG2P98160 SNORA40.3-201ENST00000390964 122 ntBASIC-0.85□□□□□ -2.55
HSPG2P98160 Y_RNA.603-201ENST00000410571 108 ntBASIC-0.85□□□□□ -2.55
HSPG2P98160 Z83846.1-201ENST00000446798 265 ntBASIC-0.85□□□□□ -2.55
HSPG2P98160 MIR1270-201ENST00000459320 83 ntBASIC-0.85□□□□□ -2.55
HSPG2P98160 RNU6-720P-201ENST00000516363 108 ntBASIC-0.85□□□□□ -2.55
HSPG2P98160 MIR5688-201ENST00000580619 83 ntBASIC-0.85□□□□□ -2.55
HSPG2P98160 RNU6-1205P-201ENST00000363625 106 ntBASIC-0.86□□□□□ -2.55
HSPG2P98160 RNU6-1158P-201ENST00000391167 107 ntBASIC-0.86□□□□□ -2.55
HSPG2P98160 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-0.86□□□□□ -2.55
HSPG2P98160 SNORD77.4-201ENST00000516158 81 ntBASIC-0.86□□□□□ -2.55
HSPG2P98160 RNU6-570P-201ENST00000517051 105 ntBASIC-0.86□□□□□ -2.55
HSPG2P98160 MIR6874-201ENST00000635894 71 ntBASIC-0.86□□□□□ -2.55
HSPG2P98160 Y_RNA.76-201ENST00000362931 109 ntBASIC-0.86□□□□□ -2.55
HSPG2P98160 Y_RNA.389-201ENST00000383924 113 ntBASIC-0.86□□□□□ -2.55
HSPG2P98160 Y_RNA.462-201ENST00000384268 102 ntBASIC-0.86□□□□□ -2.55
HSPG2P98160 Y_RNA.521-201ENST00000384560 114 ntBASIC-0.86□□□□□ -2.55
HSPG2P98160 RNU6-408P-201ENST00000515910 100 ntBASIC-0.86□□□□□ -2.55
HSPG2P98160 Y_RNA.658-201ENST00000515990 97 ntBASIC-0.86□□□□□ -2.55
HSPG2P98160 Y_RNA.691-201ENST00000516611 103 ntBASIC-0.86□□□□□ -2.55
HSPG2P98160 IGHVII-40-1-201ENST00000517316 58 ntBASIC-0.86□□□□□ -2.55
HSPG2P98160 AC108081.1-201ENST00000604358 221 ntBASIC-0.86□□□□□ -2.55
HSPG2P98160 RNU6-90P-201ENST00000606352 106 ntBASIC-0.86□□□□□ -2.55
HSPG2P98160 PISRT1.1-201ENST00000616930 107 ntBASIC-0.86□□□□□ -2.55
HSPG2P98160 U6.96-201ENST00000636425 70 ntBASIC-0.86□□□□□ -2.55
HSPG2P98160 MIR5683-201ENST00000636514 76 ntBASIC-0.86□□□□□ -2.55
HSPG2P98160 SNORD27-201ENST00000363981 72 ntBASIC-0.86□□□□□ -2.55
HSPG2P98160 Y_RNA.360-201ENST00000365512 102 ntBASIC-0.86□□□□□ -2.55
HSPG2P98160 RNU6-1040P-201ENST00000383974 107 ntBASIC-0.86□□□□□ -2.55
HSPG2P98160 RNU6-308P-201ENST00000390957 107 ntBASIC-0.86□□□□□ -2.55
HSPG2P98160 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.86□□□□□ -2.55
HSPG2P98160 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.86□□□□□ -2.55
HSPG2P98160 AC090617.8-201ENST00000623339 167 ntBASIC-0.86□□□□□ -2.55
HSPG2P98160 RNU6-495P-201ENST00000362995 107 ntBASIC-0.87□□□□□ -2.55
HSPG2P98160 Y_RNA.372-201ENST00000365599 102 ntBASIC-0.87□□□□□ -2.55
HSPG2P98160 Y_RNA.511-201ENST00000384514 103 ntBASIC-0.87□□□□□ -2.55
HSPG2P98160 MTCO2P24-201ENST00000515611 426 ntBASIC-0.87□□□□□ -2.55
HSPG2P98160 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.87□□□□□ -2.55
HSPG2P98160 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC-0.87□□□□□ -2.55
HSPG2P98160 MIR4748-201ENST00000578076 82 ntBASIC-0.87□□□□□ -2.55
HSPG2P98160 RNU4-17P-201ENST00000365598 141 ntBASIC-0.87□□□□□ -2.55
HSPG2P98160 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.87□□□□□ -2.55
HSPG2P98160 RNU6-246P-201ENST00000384702 107 ntBASIC-0.87□□□□□ -2.55
HSPG2P98160 MIR526A2-201ENST00000390198 65 ntBASIC-0.87□□□□□ -2.55
HSPG2P98160 MIR1255B2-201ENST00000408618 67 ntBASIC-0.87□□□□□ -2.55
HSPG2P98160 MIR3672-201ENST00000584290 82 ntBASIC-0.87□□□□□ -2.55
HSPG2P98160 MIR376B-201ENST00000614515 100 ntBASIC-0.87□□□□□ -2.55
HSPG2P98160 MIR487B-201ENST00000385021 84 ntBASIC-0.87□□□□□ -2.55
HSPG2P98160 RNU6-935P-201ENST00000410371 100 ntBASIC-0.87□□□□□ -2.55
HSPG2P98160 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.87□□□□□ -2.55
HSPG2P98160 RNU6-261P-201ENST00000459506 102 ntBASIC-0.87□□□□□ -2.55
HSPG2P98160 CCDC34P1-201ENST00000507441 517 ntBASIC-0.87□□□□□ -2.55
HSPG2P98160 RNU6-719P-201ENST00000516671 104 ntBASIC-0.87□□□□□ -2.55
HSPG2P98160 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.87□□□□□ -2.55
HSPG2P98160 RN7SKP295-201ENST00000517264 153 ntBASIC-0.87□□□□□ -2.55
HSPG2P98160 MTCO2P4-201ENST00000517968 247 ntBASIC-0.87□□□□□ -2.55
HSPG2P98160 RNU2-35P-201ENST00000516446 142 ntBASIC-0.87□□□□□ -2.55
HSPG2P98160 RNU6-1038P-201ENST00000516516 104 ntBASIC-0.87□□□□□ -2.55
HSPG2P98160 MIR4659A-201ENST00000580269 81 ntBASIC-0.87□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms