Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-2.09□□□□□ -2.74
RPS28P62857 MTND5P5-201ENST00000503764 376 ntBASIC-2.09□□□□□ -2.74
RPS28P62857 Y_RNA.679-201ENST00000516416 91 ntBASIC-2.09□□□□□ -2.74
RPS28P62857 Y_RNA.698-201ENST00000516798 118 ntBASIC-2.09□□□□□ -2.74
RPS28P62857 RNU6-1006P-201ENST00000516998 103 ntBASIC-2.09□□□□□ -2.74
RPS28P62857 AC108081.1-201ENST00000604358 221 ntBASIC-2.09□□□□□ -2.74
RPS28P62857 AC073114.1-201ENST00000612027 490 ntBASIC-2.09□□□□□ -2.74
RPS28P62857 RNU6-1233P-201ENST00000362922 102 ntBASIC-2.1□□□□□ -2.75
RPS28P62857 RNU6-1163P-201ENST00000364516 107 ntBASIC-2.1□□□□□ -2.75
RPS28P62857 SNORD114-3-201ENST00000364969 75 ntBASIC-2.1□□□□□ -2.75
RPS28P62857 RNA5SP331-201ENST00000364986 107 ntBASIC-2.1□□□□□ -2.75
RPS28P62857 Y_RNA.462-201ENST00000384268 102 ntBASIC-2.1□□□□□ -2.75
RPS28P62857 RNU6-763P-201ENST00000390865 106 ntBASIC-2.1□□□□□ -2.75
RPS28P62857 Y_RNA.605-201ENST00000410577 105 ntBASIC-2.1□□□□□ -2.75
RPS28P62857 MTATP6P19-201ENST00000413797 659 ntBASIC-2.1□□□□□ -2.75
RPS28P62857 AL353691.2-201ENST00000443795 59 ntBASIC-2.1□□□□□ -2.75
RPS28P62857 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC-2.1□□□□□ -2.75
RPS28P62857 RNU6-1299P-201ENST00000516316 100 ntBASIC-2.1□□□□□ -2.75
RPS28P62857 PISRT1.1-201ENST00000616930 107 ntBASIC-2.1□□□□□ -2.75
RPS28P62857 AC090617.8-201ENST00000623339 167 ntBASIC-2.1□□□□□ -2.75
RPS28P62857 AC090617.10-201ENST00000624308 134 ntBASIC-2.1□□□□□ -2.75
RPS28P62857 RNU6-451P-201ENST00000362921 107 ntBASIC-2.11□□□□□ -2.75
RPS28P62857 Y_RNA.105-201ENST00000363182 111 ntBASIC-2.11□□□□□ -2.75
RPS28P62857 Y_RNA.175-201ENST00000363794 111 ntBASIC-2.11□□□□□ -2.75
RPS28P62857 RNU6-908P-201ENST00000410160 94 ntBASIC-2.11□□□□□ -2.75
RPS28P62857 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC-2.11□□□□□ -2.75
RPS28P62857 AC090616.4-201ENST00000448026 115 ntBASIC-2.11□□□□□ -2.75
RPS28P62857 SNORD42B-201ENST00000458893 67 ntBASIC-2.11□□□□□ -2.75
RPS28P62857 Y_RNA.644-201ENST00000459006 113 ntBASIC-2.11□□□□□ -2.75
RPS28P62857 AP002795.1-201ENST00000534879 84 ntBASIC-2.11□□□□□ -2.75
RPS28P62857 MIR3129-201ENST00000581095 76 ntBASIC-2.11□□□□□ -2.75
RPS28P62857 RNU6-924P-201ENST00000362926 108 ntBASIC-2.12□□□□□ -2.75
RPS28P62857 Y_RNA.76-201ENST00000362931 109 ntBASIC-2.12□□□□□ -2.75
RPS28P62857 RNU6-370P-201ENST00000411008 104 ntBASIC-2.12□□□□□ -2.75
RPS28P62857 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-2.12□□□□□ -2.75
RPS28P62857 RNU6-118P-201ENST00000516552 102 ntBASIC-2.12□□□□□ -2.75
RPS28P62857 AL603755.1-201ENST00000619504 163 ntBASIC-2.12□□□□□ -2.75
RPS28P62857 AL359880.1-201ENST00000621879 266 ntBASIC-2.12□□□□□ -2.75
RPS28P62857 Y_RNA.54-201ENST00000362766 105 ntBASIC-2.13□□□□□ -2.75
RPS28P62857 RNY3P3-201ENST00000363816 102 ntBASIC-2.13□□□□□ -2.75
RPS28P62857 Y_RNA.293-201ENST00000364908 93 ntBASIC-2.13□□□□□ -2.75
RPS28P62857 SNORA63.6-201ENST00000364921 119 ntBASIC-2.13□□□□□ -2.75
RPS28P62857 RNU6-80P-201ENST00000384195 107 ntBASIC-2.13□□□□□ -2.75
RPS28P62857 Y_RNA.461-201ENST00000384263 103 ntBASIC-2.13□□□□□ -2.75
RPS28P62857 RNU6-1321P-201ENST00000390905 107 ntBASIC-2.13□□□□□ -2.75
RPS28P62857 Y_RNA.618-201ENST00000410949 107 ntBASIC-2.13□□□□□ -2.75
RPS28P62857 AL161932.1-201ENST00000437408 146 ntBASIC-2.13□□□□□ -2.75
RPS28P62857 RNU6-559P-201ENST00000516151 98 ntBASIC-2.13□□□□□ -2.75
RPS28P62857 Y_RNA.695-201ENST00000516715 107 ntBASIC-2.13□□□□□ -2.75
RPS28P62857 Y_RNA.704-201ENST00000516851 102 ntBASIC-2.13□□□□□ -2.75
RPS28P62857 RNU6-1314P-201ENST00000517139 104 ntBASIC-2.13□□□□□ -2.75
RPS28P62857 AC005014.3-201ENST00000605985 190 ntBASIC-2.13□□□□□ -2.75
RPS28P62857 AC013791.1-201ENST00000616619 62 ntBASIC-2.13□□□□□ -2.75
RPS28P62857 Y_RNA.5-201ENST00000362334 102 ntBASIC-2.14□□□□□ -2.75
RPS28P62857 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.14□□□□□ -2.75
RPS28P62857 Y_RNA.404-201ENST00000383978 102 ntBASIC-2.14□□□□□ -2.75
RPS28P62857 Y_RNA.542-201ENST00000384641 111 ntBASIC-2.14□□□□□ -2.75
RPS28P62857 MTND3P10-201ENST00000450967 341 ntBASIC-2.14□□□□□ -2.75
RPS28P62857 RNU6-956P-201ENST00000458868 103 ntBASIC-2.14□□□□□ -2.75
RPS28P62857 AC006504.6-201ENST00000590142 199 ntBASIC-2.14□□□□□ -2.75
RPS28P62857 TRDV1-202ENST00000621643 102 ntBASIC-2.14□□□□□ -2.75
RPS28P62857 RNU6-483P-201ENST00000384088 108 ntBASIC-2.15□□□□□ -2.75
RPS28P62857 Y_RNA.596-201ENST00000410462 109 ntBASIC-2.15□□□□□ -2.75
RPS28P62857 RPL35AP4-201ENST00000412007 102 ntBASIC-2.15□□□□□ -2.75
RPS28P62857 Y_RNA.682-201ENST00000516457 100 ntBASIC-2.15□□□□□ -2.75
RPS28P62857 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.15□□□□□ -2.75
RPS28P62857 U2.1-201ENST00000618978 145 ntBASIC-2.15□□□□□ -2.75
RPS28P62857 RNU6-79P-201ENST00000362511 107 ntBASIC-2.16□□□□□ -2.76
RPS28P62857 RNY3P11-201ENST00000364153 102 ntBASIC-2.16□□□□□ -2.76
RPS28P62857 RNY3-201ENST00000365484 102 ntBASIC-2.16□□□□□ -2.76
RPS28P62857 MIR516A2-201ENST00000384888 90 ntBASIC-2.16□□□□□ -2.76
RPS28P62857 MIR516A1-201ENST00000385033 90 ntBASIC-2.16□□□□□ -2.76
RPS28P62857 RNU6-1333P-201ENST00000516162 93 ntBASIC-2.16□□□□□ -2.76
RPS28P62857 RNA5SP153-201ENST00000516498 76 ntBASIC-2.16□□□□□ -2.76
RPS28P62857 RNU6-1247P-201ENST00000516622 98 ntBASIC-2.16□□□□□ -2.76
RPS28P62857 AL050303.3-201ENST00000613704 284 ntBASIC-2.16□□□□□ -2.76
RPS28P62857 SNORD114-4-201ENST00000363962 75 ntBASIC-2.17□□□□□ -2.76
RPS28P62857 RNU6-647P-201ENST00000364243 107 ntBASIC-2.17□□□□□ -2.76
RPS28P62857 Y_RNA.432-201ENST00000384087 111 ntBASIC-2.17□□□□□ -2.76
RPS28P62857 RPS3AP52-201ENST00000435639 297 ntBASIC-2.17□□□□□ -2.76
RPS28P62857 AL445567.1-201ENST00000439121 144 ntBASIC-2.17□□□□□ -2.76
RPS28P62857 RNU6-191P-201ENST00000516295 94 ntBASIC-2.17□□□□□ -2.76
RPS28P62857 Y_RNA.772-201ENST00000606692 102 ntBASIC-2.17□□□□□ -2.76
RPS28P62857 Y_RNA.342-201ENST00000365352 113 ntBASIC-2.18□□□□□ -2.76
RPS28P62857 Y_RNA.491-201ENST00000384417 107 ntBASIC-2.18□□□□□ -2.76
RPS28P62857 Y_RNA.528-201ENST00000384575 108 ntBASIC-2.18□□□□□ -2.76
RPS28P62857 RNU6-373P-201ENST00000411247 98 ntBASIC-2.18□□□□□ -2.76
RPS28P62857 AC113618.1-201ENST00000416747 285 ntBASIC-2.18□□□□□ -2.76
RPS28P62857 RNU7-48P-201ENST00000458875 63 ntBASIC-2.18□□□□□ -2.76
RPS28P62857 RNU6-980P-201ENST00000516925 103 ntBASIC-2.18□□□□□ -2.76
RPS28P62857 RNU6-264P-201ENST00000517134 104 ntBASIC-2.18□□□□□ -2.76
RPS28P62857 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.18□□□□□ -2.76
RPS28P62857 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-2.19□□□□□ -2.76
RPS28P62857 RNA5SP144-201ENST00000410846 116 ntBASIC-2.19□□□□□ -2.76
RPS28P62857 RNU2-55P-201ENST00000411146 174 ntBASIC-2.19□□□□□ -2.76
RPS28P62857 AC018880.2-201ENST00000414265 201 ntBASIC-2.19□□□□□ -2.76
RPS28P62857 MTND1P34-201ENST00000438556 671 ntBASIC-2.19□□□□□ -2.76
RPS28P62857 MIR1270-201ENST00000459320 83 ntBASIC-2.19□□□□□ -2.76
RPS28P62857 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-2.19□□□□□ -2.76
RPS28P62857 Y_RNA.655-201ENST00000515919 96 ntBASIC-2.19□□□□□ -2.76
Retrieved 100 of 98,524 protein–RNA pairs in 210.4 ms