Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 AC011603.4-201ENST00000611325 277 ntBASIC-1.02□□□□□ -2.57
AP1S1P61966 RNU6-170P-201ENST00000362832 104 ntBASIC-1.03□□□□□ -2.57
AP1S1P61966 Y_RNA.294-201ENST00000364916 102 ntBASIC-1.03□□□□□ -2.57
AP1S1P61966 RNU6-728P-201ENST00000365375 104 ntBASIC-1.03□□□□□ -2.57
AP1S1P61966 Y_RNA.407-201ENST00000383986 113 ntBASIC-1.03□□□□□ -2.57
AP1S1P61966 SNORA51.5-201ENST00000384126 131 ntBASIC-1.03□□□□□ -2.57
AP1S1P61966 RNU6-901P-201ENST00000384593 106 ntBASIC-1.03□□□□□ -2.57
AP1S1P61966 MIR624-201ENST00000385217 97 ntBASIC-1.03□□□□□ -2.57
AP1S1P61966 RNU6-381P-201ENST00000391259 108 ntBASIC-1.03□□□□□ -2.57
AP1S1P61966 SNORA79-201ENST00000408376 140 ntBASIC-1.03□□□□□ -2.57
AP1S1P61966 FGF7P6-202ENST00000451282 293 ntBASIC-1.03□□□□□ -2.57
AP1S1P61966 MIR2113-201ENST00000459007 91 ntBASIC-1.03□□□□□ -2.57
AP1S1P61966 SNORD19B-201ENST00000459623 84 ntBASIC-1.03□□□□□ -2.57
AP1S1P61966 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-1.03□□□□□ -2.57
AP1S1P61966 RNU6-570P-201ENST00000517051 105 ntBASIC-1.03□□□□□ -2.57
AP1S1P61966 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-1.03□□□□□ -2.57
AP1S1P61966 AC145423.2-201ENST00000610631 239 ntBASIC-1.03□□□□□ -2.57
AP1S1P61966 Y_RNA.275-201ENST00000364726 110 ntBASIC-1.04□□□□□ -2.58
AP1S1P61966 RNU6-1062P-201ENST00000383908 107 ntBASIC-1.04□□□□□ -2.58
AP1S1P61966 MIR224-201ENST00000384889 81 ntBASIC-1.04□□□□□ -2.58
AP1S1P61966 MT-TY-201ENST00000387409 66 ntBASIC-1.04□□□□□ -2.58
AP1S1P61966 RNU4-43P-201ENST00000410628 137 ntBASIC-1.04□□□□□ -2.58
AP1S1P61966 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-1.04□□□□□ -2.58
AP1S1P61966 snoU13.13-201ENST00000458842 104 ntBASIC-1.04□□□□□ -2.58
AP1S1P61966 RNU6-287P-201ENST00000516230 98 ntBASIC-1.04□□□□□ -2.58
AP1S1P61966 SNORD116-25-201ENST00000516517 92 ntBASIC-1.04□□□□□ -2.58
AP1S1P61966 SCARNA24.2-201ENST00000516968 130 ntBASIC-1.04□□□□□ -2.58
AP1S1P61966 AC009779.6-201ENST00000603972 165 ntBASIC-1.04□□□□□ -2.58
AP1S1P61966 AL132765.2-201ENST00000610812 351 ntBASIC-1.04□□□□□ -2.58
AP1S1P61966 MIR6851-201ENST00000617060 67 ntBASIC-1.04□□□□□ -2.58
AP1S1P61966 Y_RNA.98-201ENST00000363109 102 ntBASIC-1.05□□□□□ -2.58
AP1S1P61966 Y_RNA.127-201ENST00000363386 109 ntBASIC-1.05□□□□□ -2.58
AP1S1P61966 SNORA63.7-201ENST00000365579 123 ntBASIC-1.05□□□□□ -2.58
AP1S1P61966 MIR652-201ENST00000385278 98 ntBASIC-1.05□□□□□ -2.58
AP1S1P61966 SNORA49-201ENST00000386157 136 ntBASIC-1.05□□□□□ -2.58
AP1S1P61966 RNU6-823P-201ENST00000391042 103 ntBASIC-1.05□□□□□ -2.58
AP1S1P61966 ELOCP20-201ENST00000422460 345 ntBASIC-1.05□□□□□ -2.58
AP1S1P61966 MIR20A-201ENST00000362279 71 ntBASIC-1.06□□□□□ -2.58
AP1S1P61966 Y_RNA.64-201ENST00000362845 102 ntBASIC-1.06□□□□□ -2.58
AP1S1P61966 Y_RNA.142-201ENST00000363491 102 ntBASIC-1.06□□□□□ -2.58
AP1S1P61966 RNA5SP368-201ENST00000364298 116 ntBASIC-1.06□□□□□ -2.58
AP1S1P61966 MT-TQ-201ENST00000387372 72 ntBASIC-1.06□□□□□ -2.58
AP1S1P61966 SERF1AP1-201ENST00000514575 187 ntBASIC-1.06□□□□□ -2.58
AP1S1P61966 AP001362.1-201ENST00000625165 124 ntBASIC-1.06□□□□□ -2.58
AP1S1P61966 Y_RNA.214-201ENST00000364201 112 ntBASIC-1.07□□□□□ -2.58
AP1S1P61966 MIR516A2-201ENST00000384888 90 ntBASIC-1.07□□□□□ -2.58
AP1S1P61966 MIR516A1-201ENST00000385033 90 ntBASIC-1.07□□□□□ -2.58
AP1S1P61966 RNU6-721P-201ENST00000410155 105 ntBASIC-1.07□□□□□ -2.58
AP1S1P61966 MTND5P22-201ENST00000458380 195 ntBASIC-1.07□□□□□ -2.58
AP1S1P61966 AC021146.6-201ENST00000514659 117 ntBASIC-1.07□□□□□ -2.58
AP1S1P61966 RNU6-881P-201ENST00000516813 102 ntBASIC-1.07□□□□□ -2.58
AP1S1P61966 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-1.07□□□□□ -2.58
AP1S1P61966 RNU2-4P-201ENST00000606190 192 ntBASIC-1.07□□□□□ -2.58
AP1S1P61966 AC093783.1-201ENST00000612976 329 ntBASIC-1.07□□□□□ -2.58
AP1S1P61966 MIR376B-201ENST00000614515 100 ntBASIC-1.07□□□□□ -2.58
AP1S1P61966 Y_RNA.328-201ENST00000365208 113 ntBASIC-1.08□□□□□ -2.58
AP1S1P61966 Y_RNA.389-201ENST00000383924 113 ntBASIC-1.08□□□□□ -2.58
AP1S1P61966 MIR1252-201ENST00000408861 65 ntBASIC-1.08□□□□□ -2.58
AP1S1P61966 RNU4-69P-201ENST00000410677 143 ntBASIC-1.08□□□□□ -2.58
AP1S1P61966 RNU7-55P-201ENST00000459426 62 ntBASIC-1.08□□□□□ -2.58
AP1S1P61966 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.08□□□□□ -2.58
AP1S1P61966 RNA5SP236-201ENST00000516169 116 ntBASIC-1.08□□□□□ -2.58
AP1S1P61966 AL442663.2-201ENST00000554385 511 ntBASIC-1.08□□□□□ -2.58
AP1S1P61966 AL365265.1-201ENST00000621045 234 ntBASIC-1.08□□□□□ -2.58
AP1S1P61966 Y_RNA.19-201ENST00000362462 99 ntBASIC-1.09□□□□□ -2.58
AP1S1P61966 Y_RNA.35-201ENST00000362601 101 ntBASIC-1.09□□□□□ -2.58
AP1S1P61966 RNU6-770P-201ENST00000363929 105 ntBASIC-1.09□□□□□ -2.58
AP1S1P61966 RNU6-690P-201ENST00000365242 106 ntBASIC-1.09□□□□□ -2.58
AP1S1P61966 SNORD115-44-201ENST00000365391 82 ntBASIC-1.09□□□□□ -2.58
AP1S1P61966 Y_RNA.357-201ENST00000365487 109 ntBASIC-1.09□□□□□ -2.58
AP1S1P61966 AL161932.1-201ENST00000437408 146 ntBASIC-1.09□□□□□ -2.58
AP1S1P61966 SNORD2.1-201ENST00000458762 69 ntBASIC-1.09□□□□□ -2.58
AP1S1P61966 RNU6-850P-201ENST00000516934 103 ntBASIC-1.09□□□□□ -2.58
AP1S1P61966 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-1.09□□□□□ -2.58
AP1S1P61966 Y_RNA.197-201ENST00000364004 102 ntBASIC-1.1□□□□□ -2.59
AP1S1P61966 Y_RNA.416-201ENST00000384014 113 ntBASIC-1.1□□□□□ -2.59
AP1S1P61966 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.1□□□□□ -2.59
AP1S1P61966 AC244090.1-201ENST00000441884 93 ntBASIC-1.1□□□□□ -2.59
AP1S1P61966 AL121914.1-201ENST00000450188 156 ntBASIC-1.1□□□□□ -2.59
AP1S1P61966 RNY3P15-201ENST00000516297 97 ntBASIC-1.1□□□□□ -2.59
AP1S1P61966 RNU6-1338P-201ENST00000516328 91 ntBASIC-1.1□□□□□ -2.59
AP1S1P61966 MIR6086-201ENST00000638065 55 ntBASIC-1.1□□□□□ -2.59
AP1S1P61966 Y_RNA.52-201ENST00000362760 96 ntBASIC-1.11□□□□□ -2.59
AP1S1P61966 Y_RNA.84-201ENST00000363011 104 ntBASIC-1.11□□□□□ -2.59
AP1S1P61966 Y_RNA.342-201ENST00000365352 113 ntBASIC-1.11□□□□□ -2.59
AP1S1P61966 RNU6-571P-201ENST00000384128 107 ntBASIC-1.11□□□□□ -2.59
AP1S1P61966 MIR196A1-201ENST00000388006 70 ntBASIC-1.11□□□□□ -2.59
AP1S1P61966 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.11□□□□□ -2.59
AP1S1P61966 Y_RNA.579-201ENST00000390939 94 ntBASIC-1.11□□□□□ -2.59
AP1S1P61966 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.11□□□□□ -2.59
AP1S1P61966 RNU7-2P-201ENST00000516096 62 ntBASIC-1.11□□□□□ -2.59
AP1S1P61966 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-1.11□□□□□ -2.59
AP1S1P61966 MTND5P18-201ENST00000445624 1801 ntBASIC-1.12□□□□□ -2.59
AP1S1P61966 Y_RNA.58-201ENST00000362807 102 ntBASIC-1.12□□□□□ -2.59
AP1S1P61966 RNU6-1163P-201ENST00000364516 107 ntBASIC-1.12□□□□□ -2.59
AP1S1P61966 RNY3P1-201ENST00000365085 102 ntBASIC-1.12□□□□□ -2.59
AP1S1P61966 AC074198.2-201ENST00000508153 258 ntBASIC-1.12□□□□□ -2.59
AP1S1P61966 RNU6-240P-201ENST00000516098 97 ntBASIC-1.12□□□□□ -2.59
AP1S1P61966 SNORA40.15-201ENST00000516884 107 ntBASIC-1.12□□□□□ -2.59
AP1S1P61966 MIR5704-201ENST00000584029 77 ntBASIC-1.12□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 1805 ms