Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 UBL5P1-201ENST00000507979 193 ntBASIC0.85□□□□□ -2.27
CDH12P55289 AC025627.3-201ENST00000582078 182 ntBASIC0.85□□□□□ -2.27
CDH12P55289 MIR4661-201ENST00000582720 75 ntBASIC0.85□□□□□ -2.27
CDH12P55289 U6.90-201ENST00000614007 104 ntBASIC0.85□□□□□ -2.27
CDH12P55289 U6.70-201ENST00000620287 104 ntBASIC0.85□□□□□ -2.27
CDH12P55289 RNA5SP432-201ENST00000362480 116 ntBASIC0.84□□□□□ -2.27
CDH12P55289 Y_RNA.35-201ENST00000362601 101 ntBASIC0.84□□□□□ -2.27
CDH12P55289 SNORA63.5-201ENST00000363548 123 ntBASIC0.84□□□□□ -2.27
CDH12P55289 RNU4-67P-201ENST00000364569 141 ntBASIC0.84□□□□□ -2.27
CDH12P55289 RNY1P2-201ENST00000364820 117 ntBASIC0.84□□□□□ -2.27
CDH12P55289 Y_RNA.328-201ENST00000365208 113 ntBASIC0.84□□□□□ -2.27
CDH12P55289 SNORD116-21-201ENST00000384507 92 ntBASIC0.84□□□□□ -2.27
CDH12P55289 RNU1-119P-201ENST00000391122 165 ntBASIC0.84□□□□□ -2.27
CDH12P55289 SNORA7.5-201ENST00000410672 110 ntBASIC0.84□□□□□ -2.27
CDH12P55289 RNU6-531P-201ENST00000516694 104 ntBASIC0.84□□□□□ -2.27
CDH12P55289 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.84□□□□□ -2.27
CDH12P55289 AL359821.1-201ENST00000605519 182 ntBASIC0.84□□□□□ -2.27
CDH12P55289 MIR376B-201ENST00000614515 100 ntBASIC0.84□□□□□ -2.27
CDH12P55289 AL162726.3-218ENST00000636401 95 ntBASIC0.84□□□□□ -2.27
CDH12P55289 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.84□□□□□ -2.27
CDH12P55289 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
CDH12P55289 Y_RNA.98-201ENST00000363109 102 ntBASIC0.83□□□□□ -2.28
CDH12P55289 Y_RNA.119-201ENST00000363301 96 ntBASIC0.83□□□□□ -2.28
CDH12P55289 RNU6-1081P-201ENST00000384537 107 ntBASIC0.83□□□□□ -2.28
CDH12P55289 RNU6-429P-201ENST00000384582 108 ntBASIC0.83□□□□□ -2.28
CDH12P55289 MIR34C-201ENST00000384831 77 ntBASIC0.83□□□□□ -2.28
CDH12P55289 RNU6-816P-201ENST00000390914 107 ntBASIC0.83□□□□□ -2.28
CDH12P55289 RNU6-679P-201ENST00000391003 106 ntBASIC0.83□□□□□ -2.28
CDH12P55289 RNU6-1268P-201ENST00000391214 107 ntBASIC0.83□□□□□ -2.28
CDH12P55289 RNU6-1239P-201ENST00000391310 107 ntBASIC0.83□□□□□ -2.28
CDH12P55289 SNORD99-201ENST00000408612 74 ntBASIC0.83□□□□□ -2.28
CDH12P55289 RPL39P34-201ENST00000477141 156 ntBASIC0.83□□□□□ -2.28
CDH12P55289 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.83□□□□□ -2.28
CDH12P55289 TRMT112P2-201ENST00000512910 132 ntBASIC0.83□□□□□ -2.28
CDH12P55289 RNU6-1053P-201ENST00000515930 101 ntBASIC0.83□□□□□ -2.28
CDH12P55289 MIR4498-201ENST00000577599 66 ntBASIC0.83□□□□□ -2.28
CDH12P55289 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.83□□□□□ -2.28
CDH12P55289 MIR6129-201ENST00000616087 109 ntBASIC0.83□□□□□ -2.28
CDH12P55289 RNU6-834P-201ENST00000362367 110 ntBASIC0.82□□□□□ -2.28
CDH12P55289 Y_RNA.85-201ENST00000363014 111 ntBASIC0.82□□□□□ -2.28
CDH12P55289 RNU6-865P-201ENST00000364772 107 ntBASIC0.82□□□□□ -2.28
CDH12P55289 RNU6-392P-201ENST00000364926 101 ntBASIC0.82□□□□□ -2.28
CDH12P55289 RNU6-880P-201ENST00000384526 107 ntBASIC0.82□□□□□ -2.28
CDH12P55289 MIR605-201ENST00000385078 83 ntBASIC0.82□□□□□ -2.28
CDH12P55289 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.82□□□□□ -2.28
CDH12P55289 AC090897.1-201ENST00000580909 226 ntBASIC0.82□□□□□ -2.28
CDH12P55289 AC013244.2-201ENST00000603396 103 ntBASIC0.82□□□□□ -2.28
CDH12P55289 AL353765.1-201ENST00000605514 183 ntBASIC0.82□□□□□ -2.28
CDH12P55289 MIR337-201ENST00000362281 93 ntBASIC0.81□□□□□ -2.28
CDH12P55289 Y_RNA.155-201ENST00000363632 101 ntBASIC0.81□□□□□ -2.28
CDH12P55289 Y_RNA.281-201ENST00000364774 94 ntBASIC0.81□□□□□ -2.28
CDH12P55289 Y_RNA.291-201ENST00000364886 113 ntBASIC0.81□□□□□ -2.28
CDH12P55289 RNU6-1056P-201ENST00000383996 107 ntBASIC0.81□□□□□ -2.28
CDH12P55289 AL603825.1-201ENST00000438481 80 ntBASIC0.81□□□□□ -2.28
CDH12P55289 ACA64.5-201ENST00000516207 127 ntBASIC0.81□□□□□ -2.28
CDH12P55289 RNU6-765P-201ENST00000516916 99 ntBASIC0.81□□□□□ -2.28
CDH12P55289 DEFB131E-201ENST00000532329 154 ntBASIC0.81□□□□□ -2.28
CDH12P55289 AP001362.1-201ENST00000625165 124 ntBASIC0.81□□□□□ -2.28
CDH12P55289 RNU6-1290P-201ENST00000362957 109 ntBASIC0.8□□□□□ -2.28
CDH12P55289 RNU4-58P-201ENST00000363192 141 ntBASIC0.8□□□□□ -2.28
CDH12P55289 SNORD114-2-201ENST00000363953 78 ntBASIC0.8□□□□□ -2.28
CDH12P55289 Y_RNA.273-201ENST00000364703 102 ntBASIC0.8□□□□□ -2.28
CDH12P55289 RNU6-409P-201ENST00000384114 104 ntBASIC0.8□□□□□ -2.28
CDH12P55289 Y_RNA.507-201ENST00000384500 99 ntBASIC0.8□□□□□ -2.28
CDH12P55289 MIR573-201ENST00000384964 99 ntBASIC0.8□□□□□ -2.28
CDH12P55289 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.8□□□□□ -2.28
CDH12P55289 MIR1912-201ENST00000410389 80 ntBASIC0.8□□□□□ -2.28
CDH12P55289 AC244098.3-201ENST00000424803 96 ntBASIC0.8□□□□□ -2.28
CDH12P55289 AC068339.1-201ENST00000526965 141 ntBASIC0.8□□□□□ -2.28
CDH12P55289 Y_RNA.116-201ENST00000363292 103 ntBASIC0.79□□□□□ -2.28
CDH12P55289 U8.6-201ENST00000364939 135 ntBASIC0.79□□□□□ -2.28
CDH12P55289 Y_RNA.309-201ENST00000365046 111 ntBASIC0.79□□□□□ -2.28
CDH12P55289 Y_RNA.360-201ENST00000365512 102 ntBASIC0.79□□□□□ -2.28
CDH12P55289 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
CDH12P55289 MIR608-201ENST00000384820 100 ntBASIC0.79□□□□□ -2.28
CDH12P55289 MIR532-201ENST00000385025 91 ntBASIC0.79□□□□□ -2.28
CDH12P55289 RNU6-733P-201ENST00000410759 104 ntBASIC0.79□□□□□ -2.28
CDH12P55289 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.79□□□□□ -2.28
CDH12P55289 RNU6-448P-201ENST00000517052 107 ntBASIC0.79□□□□□ -2.28
CDH12P55289 AC011195.1-201ENST00000578177 177 ntBASIC0.79□□□□□ -2.28
CDH12P55289 RNU6-1313P-201ENST00000362622 102 ntBASIC0.78□□□□□ -2.28
CDH12P55289 RNY1P10-201ENST00000363268 113 ntBASIC0.78□□□□□ -2.28
CDH12P55289 RNU6-321P-201ENST00000410912 106 ntBASIC0.78□□□□□ -2.28
CDH12P55289 Y_RNA.629-201ENST00000411368 105 ntBASIC0.78□□□□□ -2.28
CDH12P55289 AC002350.1-201ENST00000490759 375 ntBASIC0.78□□□□□ -2.28
CDH12P55289 RNU6-1194P-201ENST00000516208 104 ntBASIC0.78□□□□□ -2.28
CDH12P55289 RNU6-1006P-201ENST00000516998 103 ntBASIC0.78□□□□□ -2.28
CDH12P55289 AP003327.1-201ENST00000529684 127 ntBASIC0.78□□□□□ -2.28
CDH12P55289 MIR5009-201ENST00000578736 100 ntBASIC0.78□□□□□ -2.28
CDH12P55289 MIR4500-201ENST00000579472 76 ntBASIC0.78□□□□□ -2.28
CDH12P55289 AL512310.12-203ENST00000640543 90 ntBASIC0.78□□□□□ -2.28
CDH12P55289 SNORD114-27-201ENST00000363766 70 ntBASIC0.77□□□□□ -2.29
CDH12P55289 Y_RNA.247-201ENST00000364500 92 ntBASIC0.77□□□□□ -2.29
CDH12P55289 SNORD100-201ENST00000408573 76 ntBASIC0.77□□□□□ -2.29
CDH12P55289 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.77□□□□□ -2.29
CDH12P55289 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.77□□□□□ -2.29
CDH12P55289 RNU6-589P-201ENST00000516485 107 ntBASIC0.77□□□□□ -2.29
CDH12P55289 RNU6-1018P-201ENST00000516577 106 ntBASIC0.77□□□□□ -2.29
CDH12P55289 Y_RNA.697-201ENST00000516776 113 ntBASIC0.77□□□□□ -2.29
CDH12P55289 MIR548AI-201ENST00000579940 88 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms