Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 RNU7-43P-201ENST00000516554 64 ntBASIC1.72□□□□□ -2.13
HMGA2P52926 AP000942.3-201ENST00000603702 160 ntBASIC1.72□□□□□ -2.13
HMGA2P52926 SNORD38B-202ENST00000625943 69 ntBASIC1.72□□□□□ -2.13
HMGA2P52926 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.72□□□□□ -2.13
HMGA2P52926 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
HMGA2P52926 RNU6-824P-201ENST00000363724 104 ntBASIC1.71□□□□□ -2.14
HMGA2P52926 SNORD48-201ENST00000364953 64 ntBASIC1.71□□□□□ -2.14
HMGA2P52926 SNORA24B-201ENST00000384176 131 ntBASIC1.71□□□□□ -2.14
HMGA2P52926 RNU6-243P-201ENST00000391140 107 ntBASIC1.71□□□□□ -2.14
HMGA2P52926 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.71□□□□□ -2.14
HMGA2P52926 RNA5SP237-201ENST00000410414 113 ntBASIC1.71□□□□□ -2.14
HMGA2P52926 Z96811.1-201ENST00000445880 108 ntBASIC1.71□□□□□ -2.14
HMGA2P52926 AC245517.4-201ENST00000448601 281 ntBASIC1.71□□□□□ -2.14
HMGA2P52926 SUB1P4-201ENST00000566062 339 ntBASIC1.71□□□□□ -2.14
HMGA2P52926 AL627230.6-201ENST00000611129 280 ntBASIC1.71□□□□□ -2.14
HMGA2P52926 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.71□□□□□ -2.14
HMGA2P52926 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.71□□□□□ -2.14
HMGA2P52926 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
HMGA2P52926 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.71□□□□□ -2.14
HMGA2P52926 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.7□□□□□ -2.14
HMGA2P52926 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
HMGA2P52926 SNORD113.1-201ENST00000363280 73 ntBASIC1.7□□□□□ -2.14
HMGA2P52926 RNU6-112P-201ENST00000363599 104 ntBASIC1.7□□□□□ -2.14
HMGA2P52926 RNU6-1067P-201ENST00000384752 107 ntBASIC1.7□□□□□ -2.14
HMGA2P52926 MIR520C-201ENST00000385005 87 ntBASIC1.7□□□□□ -2.14
HMGA2P52926 MIR483-201ENST00000385070 76 ntBASIC1.7□□□□□ -2.14
HMGA2P52926 MIR548U-201ENST00000390728 81 ntBASIC1.7□□□□□ -2.14
HMGA2P52926 Y_RNA.606-201ENST00000410579 103 ntBASIC1.7□□□□□ -2.14
HMGA2P52926 SNORD63B-201ENST00000411005 70 ntBASIC1.7□□□□□ -2.14
HMGA2P52926 RNU6-881P-201ENST00000516813 102 ntBASIC1.7□□□□□ -2.14
HMGA2P52926 MIR3675-201ENST00000583661 73 ntBASIC1.7□□□□□ -2.14
HMGA2P52926 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.7□□□□□ -2.14
HMGA2P52926 MIR4251-201ENST00000635819 61 ntBASIC1.7□□□□□ -2.14
HMGA2P52926 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
HMGA2P52926 RNU6-446P-201ENST00000362827 106 ntBASIC1.69□□□□□ -2.14
HMGA2P52926 MIR588-201ENST00000384900 83 ntBASIC1.69□□□□□ -2.14
HMGA2P52926 SNORA40.6-201ENST00000391153 128 ntBASIC1.69□□□□□ -2.14
HMGA2P52926 snoU13.25-201ENST00000458945 104 ntBASIC1.69□□□□□ -2.14
HMGA2P52926 SNORA25.16-201ENST00000516741 121 ntBASIC1.69□□□□□ -2.14
HMGA2P52926 RNU11-2P-201ENST00000516898 142 ntBASIC1.69□□□□□ -2.14
HMGA2P52926 MIR4419B-201ENST00000577260 68 ntBASIC1.69□□□□□ -2.14
HMGA2P52926 AC012493.3-201ENST00000604494 112 ntBASIC1.69□□□□□ -2.14
HMGA2P52926 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
HMGA2P52926 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC1.69□□□□□ -2.14
HMGA2P52926 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.69□□□□□ -2.14
HMGA2P52926 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
HMGA2P52926 MIR424-201ENST00000362227 98 ntBASIC1.68□□□□□ -2.14
HMGA2P52926 SNORD45.1-201ENST00000363181 77 ntBASIC1.68□□□□□ -2.14
HMGA2P52926 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
HMGA2P52926 RNU11-3P-201ENST00000391111 133 ntBASIC1.68□□□□□ -2.14
HMGA2P52926 RNU6-466P-201ENST00000391224 103 ntBASIC1.68□□□□□ -2.14
HMGA2P52926 HMGN2P3-201ENST00000433603 273 ntBASIC1.68□□□□□ -2.14
HMGA2P52926 HMGN2P5-201ENST00000436882 273 ntBASIC1.68□□□□□ -2.14
HMGA2P52926 TRAJ51-201ENST00000504127 63 ntBASIC1.68□□□□□ -2.14
HMGA2P52926 RNU6-1194P-201ENST00000516208 104 ntBASIC1.68□□□□□ -2.14
HMGA2P52926 RNU6-531P-201ENST00000516694 104 ntBASIC1.68□□□□□ -2.14
HMGA2P52926 MIR3192-201ENST00000584920 77 ntBASIC1.68□□□□□ -2.14
HMGA2P52926 AL357312.1-201ENST00000603879 298 ntBASIC1.68□□□□□ -2.14
HMGA2P52926 MIR7978-201ENST00000636158 59 ntBASIC1.68□□□□□ -2.14
HMGA2P52926 AC103706.3-201ENST00000636297 85 ntBASIC1.68□□□□□ -2.14
HMGA2P52926 AP000648.3-201ENST00000623539 4507 ntBASIC1.67□□□□□ -2.14
HMGA2P52926 AP006437.1-201ENST00000641440 3685 ntBASIC1.67□□□□□ -2.14
HMGA2P52926 RNA5SP139-201ENST00000364340 117 ntBASIC1.67□□□□□ -2.14
HMGA2P52926 Y_RNA.258-201ENST00000364613 105 ntBASIC1.67□□□□□ -2.14
HMGA2P52926 RNU6-1187P-201ENST00000364771 110 ntBASIC1.67□□□□□ -2.14
HMGA2P52926 RNU6-950P-201ENST00000384651 107 ntBASIC1.67□□□□□ -2.14
HMGA2P52926 Y_RNA.588-201ENST00000391254 102 ntBASIC1.67□□□□□ -2.14
HMGA2P52926 RPL23AP83-201ENST00000434984 473 ntBASIC1.67□□□□□ -2.14
HMGA2P52926 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
HMGA2P52926 RNU7-195P-201ENST00000458793 62 ntBASIC1.67□□□□□ -2.14
HMGA2P52926 MIR4696-201ENST00000581431 70 ntBASIC1.67□□□□□ -2.14
HMGA2P52926 U6.81-201ENST00000612550 106 ntBASIC1.67□□□□□ -2.14
HMGA2P52926 U6.100-201ENST00000636230 99 ntBASIC1.67□□□□□ -2.14
HMGA2P52926 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC1.67□□□□□ -2.14
HMGA2P52926 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
HMGA2P52926 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.66□□□□□ -2.14
HMGA2P52926 RNU6-203P-201ENST00000384038 104 ntBASIC1.66□□□□□ -2.14
HMGA2P52926 RNU6-895P-201ENST00000384125 103 ntBASIC1.66□□□□□ -2.14
HMGA2P52926 RNU1-148P-201ENST00000384472 162 ntBASIC1.66□□□□□ -2.14
HMGA2P52926 RNU6-604P-201ENST00000390917 100 ntBASIC1.66□□□□□ -2.14
HMGA2P52926 SNORA11.1-201ENST00000408133 129 ntBASIC1.66□□□□□ -2.14
HMGA2P52926 RNU7-26P-201ENST00000458980 63 ntBASIC1.66□□□□□ -2.14
HMGA2P52926 snoU13.27-201ENST00000459278 104 ntBASIC1.66□□□□□ -2.14
HMGA2P52926 MIR4709-201ENST00000577272 72 ntBASIC1.66□□□□□ -2.14
HMGA2P52926 MIR4491-201ENST00000581087 68 ntBASIC1.66□□□□□ -2.14
HMGA2P52926 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
HMGA2P52926 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.65□□□□□ -2.15
HMGA2P52926 RNU6-1216P-201ENST00000362590 107 ntBASIC1.65□□□□□ -2.15
HMGA2P52926 SNORD113-4-201ENST00000364802 75 ntBASIC1.65□□□□□ -2.15
HMGA2P52926 MIR520A-201ENST00000384862 85 ntBASIC1.65□□□□□ -2.15
HMGA2P52926 RNA5SP425-201ENST00000410336 112 ntBASIC1.65□□□□□ -2.15
HMGA2P52926 RNU6-1052P-201ENST00000411398 104 ntBASIC1.65□□□□□ -2.15
HMGA2P52926 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
HMGA2P52926 RNU6-982P-201ENST00000516216 102 ntBASIC1.65□□□□□ -2.15
HMGA2P52926 RNU6-719P-201ENST00000516671 104 ntBASIC1.65□□□□□ -2.15
HMGA2P52926 SNORA4-201ENST00000584302 138 ntBASIC1.65□□□□□ -2.15
HMGA2P52926 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.65□□□□□ -2.15
HMGA2P52926 TRDV1-202ENST00000621643 102 ntBASIC1.65□□□□□ -2.15
HMGA2P52926 AL359851.1-201ENST00000569460 4997 ntBASIC1.64□□□□□ -2.15
HMGA2P52926 RNU6-369P-201ENST00000362515 102 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 175.1 ms