Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 RNU6-1336P-201ENST00000383886 109 ntBASIC0.11□□□□□ -2.39
GPC3P51654 Y_RNA.497-201ENST00000384447 98 ntBASIC0.11□□□□□ -2.39
GPC3P51654 SNORD37.2-201ENST00000391075 66 ntBASIC0.11□□□□□ -2.39
GPC3P51654 SNORD77B-201ENST00000391112 67 ntBASIC0.11□□□□□ -2.39
GPC3P51654 RNU7-164P-201ENST00000459221 62 ntBASIC0.11□□□□□ -2.39
GPC3P51654 RNU7-121P-201ENST00000516604 62 ntBASIC0.11□□□□□ -2.39
GPC3P51654 RNU6-531P-201ENST00000516694 104 ntBASIC0.11□□□□□ -2.39
GPC3P51654 RNU7-137P-201ENST00000516788 62 ntBASIC0.11□□□□□ -2.39
GPC3P51654 AC138869.1-201ENST00000568623 124 ntBASIC0.11□□□□□ -2.39
GPC3P51654 MIR548H5-201ENST00000580314 60 ntBASIC0.11□□□□□ -2.39
GPC3P51654 DNAJC19P2-201ENST00000593340 302 ntBASIC0.11□□□□□ -2.39
GPC3P51654 U6.109-201ENST00000636749 87 ntBASIC0.11□□□□□ -2.39
GPC3P51654 RNU4-84P-201ENST00000364200 139 ntBASIC0.1□□□□□ -2.39
GPC3P51654 RNY1P2-201ENST00000364820 117 ntBASIC0.1□□□□□ -2.39
GPC3P51654 Y_RNA.401-201ENST00000383965 117 ntBASIC0.1□□□□□ -2.39
GPC3P51654 RNU6-1126P-201ENST00000384002 107 ntBASIC0.1□□□□□ -2.39
GPC3P51654 SNORA32-201ENST00000384072 121 ntBASIC0.1□□□□□ -2.39
GPC3P51654 RNU6-429P-201ENST00000384582 108 ntBASIC0.1□□□□□ -2.39
GPC3P51654 Y_RNA.584-201ENST00000391090 114 ntBASIC0.1□□□□□ -2.39
GPC3P51654 RNU4-69P-201ENST00000410677 143 ntBASIC0.1□□□□□ -2.39
GPC3P51654 Y_RNA.793-201ENST00000411222 111 ntBASIC0.1□□□□□ -2.39
GPC3P51654 SUMO1P3-201ENST00000439961 304 ntBASIC0.1□□□□□ -2.39
GPC3P51654 RNU6-1219P-201ENST00000516143 112 ntBASIC0.1□□□□□ -2.39
GPC3P51654 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.1□□□□□ -2.39
GPC3P51654 AC130289.1-201ENST00000577321 73 ntBASIC0.1□□□□□ -2.39
GPC3P51654 MIR548AE2-201ENST00000583456 67 ntBASIC0.1□□□□□ -2.39
GPC3P51654 MIR7107-201ENST00000611489 80 ntBASIC0.1□□□□□ -2.39
GPC3P51654 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.1□□□□□ -2.39
GPC3P51654 AC244669.1-204ENST00000621564 178 ntBASIC0.1□□□□□ -2.39
GPC3P51654 Y_RNA.119-201ENST00000363301 96 ntBASIC0.09□□□□□ -2.4
GPC3P51654 Y_RNA.297-201ENST00000364950 91 ntBASIC0.09□□□□□ -2.4
GPC3P51654 Y_RNA.552-201ENST00000384665 112 ntBASIC0.09□□□□□ -2.4
GPC3P51654 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.09□□□□□ -2.4
GPC3P51654 RNU6-588P-201ENST00000410281 105 ntBASIC0.09□□□□□ -2.4
GPC3P51654 RNU6-240P-201ENST00000516098 97 ntBASIC0.09□□□□□ -2.4
GPC3P51654 SNORD67.1-201ENST00000516618 108 ntBASIC0.09□□□□□ -2.4
GPC3P51654 Y_RNA.700-201ENST00000516806 100 ntBASIC0.09□□□□□ -2.4
GPC3P51654 AP002392.1-201ENST00000537692 208 ntBASIC0.09□□□□□ -2.4
GPC3P51654 AC138749.4-201ENST00000563970 127 ntBASIC0.09□□□□□ -2.4
GPC3P51654 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.09□□□□□ -2.4
GPC3P51654 SNORA42.1-201ENST00000363515 137 ntBASIC0.08□□□□□ -2.4
GPC3P51654 Y_RNA.188-201ENST00000363952 111 ntBASIC0.08□□□□□ -2.4
GPC3P51654 RNU6-815P-201ENST00000384080 113 ntBASIC0.08□□□□□ -2.4
GPC3P51654 AL603914.1-201ENST00000401964 204 ntBASIC0.08□□□□□ -2.4
GPC3P51654 RNU6-1135P-201ENST00000411083 103 ntBASIC0.08□□□□□ -2.4
GPC3P51654 Y_RNA.660-201ENST00000516002 120 ntBASIC0.08□□□□□ -2.4
GPC3P51654 RNU2-35P-201ENST00000516446 142 ntBASIC0.08□□□□□ -2.4
GPC3P51654 TUG1_4.1-201ENST00000619464 181 ntBASIC0.08□□□□□ -2.4
GPC3P51654 Y_RNA.30-201ENST00000362572 97 ntBASIC0.07□□□□□ -2.4
GPC3P51654 Y_RNA.240-201ENST00000364469 95 ntBASIC0.07□□□□□ -2.4
GPC3P51654 MT-TG-201ENST00000387429 68 ntBASIC0.07□□□□□ -2.4
GPC3P51654 AC244505.6-201ENST00000452829 130 ntBASIC0.07□□□□□ -2.4
GPC3P51654 RNA5SP257-201ENST00000363023 116 ntBASIC0.06□□□□□ -2.4
GPC3P51654 Y_RNA.98-201ENST00000363109 102 ntBASIC0.06□□□□□ -2.4
GPC3P51654 Y_RNA.298-201ENST00000364960 107 ntBASIC0.06□□□□□ -2.4
GPC3P51654 AC069271.1-201ENST00000445577 156 ntBASIC0.06□□□□□ -2.4
GPC3P51654 Y_RNA.274-201ENST00000364714 101 ntBASIC0.05□□□□□ -2.4
GPC3P51654 Y_RNA.362-201ENST00000365518 110 ntBASIC0.05□□□□□ -2.4
GPC3P51654 Y_RNA.366-201ENST00000365540 102 ntBASIC0.05□□□□□ -2.4
GPC3P51654 SNORA2A-201ENST00000383885 135 ntBASIC0.05□□□□□ -2.4
GPC3P51654 RNU7-120P-201ENST00000459334 63 ntBASIC0.05□□□□□ -2.4
GPC3P51654 RNU7-123P-201ENST00000515911 60 ntBASIC0.05□□□□□ -2.4
GPC3P51654 Y_RNA.662-201ENST00000516028 97 ntBASIC0.05□□□□□ -2.4
GPC3P51654 Y_RNA.690-201ENST00000516603 95 ntBASIC0.05□□□□□ -2.4
GPC3P51654 RNU6-1271P-201ENST00000517049 105 ntBASIC0.05□□□□□ -2.4
GPC3P51654 MIR4768-201ENST00000585270 74 ntBASIC0.05□□□□□ -2.4
GPC3P51654 SNORD115-24-201ENST00000363528 82 ntBASIC0.04□□□□□ -2.4
GPC3P51654 RNU6-200P-201ENST00000364743 107 ntBASIC0.04□□□□□ -2.4
GPC3P51654 Y_RNA.423-201ENST00000384057 113 ntBASIC0.04□□□□□ -2.4
GPC3P51654 Y_RNA.441-201ENST00000384123 112 ntBASIC0.04□□□□□ -2.4
GPC3P51654 MIR635-201ENST00000384830 98 ntBASIC0.04□□□□□ -2.4
GPC3P51654 MIR610-201ENST00000385139 96 ntBASIC0.04□□□□□ -2.4
GPC3P51654 MIR892B-201ENST00000401279 77 ntBASIC0.04□□□□□ -2.4
GPC3P51654 MIR548L-201ENST00000408303 86 ntBASIC0.04□□□□□ -2.4
GPC3P51654 MIR5190-201ENST00000581537 80 ntBASIC0.04□□□□□ -2.4
GPC3P51654 U7.6-201ENST00000610841 64 ntBASIC0.04□□□□□ -2.4
GPC3P51654 AC067863.3-201ENST00000624172 122 ntBASIC0.04□□□□□ -2.4
GPC3P51654 Y_RNA.49-201ENST00000362714 112 ntBASIC0.03□□□□□ -2.4
GPC3P51654 RNU6-574P-201ENST00000384265 107 ntBASIC0.03□□□□□ -2.4
GPC3P51654 RNU7-48P-201ENST00000458875 63 ntBASIC0.03□□□□□ -2.4
GPC3P51654 RNU2-60P-201ENST00000517290 128 ntBASIC0.03□□□□□ -2.4
GPC3P51654 AC022559.1-201ENST00000520905 205 ntBASIC0.03□□□□□ -2.4
GPC3P51654 MIR4743-201ENST00000584576 69 ntBASIC0.03□□□□□ -2.4
GPC3P51654 AL359881.1-201ENST00000602916 267 ntBASIC0.03□□□□□ -2.4
GPC3P51654 Y_RNA.29-201ENST00000362570 113 ntBASIC0.02□□□□□ -2.41
GPC3P51654 RNA5SP214-201ENST00000363378 118 ntBASIC0.02□□□□□ -2.41
GPC3P51654 RNA5SP245-201ENST00000364239 121 ntBASIC0.02□□□□□ -2.41
GPC3P51654 RNA5SP128-201ENST00000365305 116 ntBASIC0.02□□□□□ -2.41
GPC3P51654 MIR760-201ENST00000390220 80 ntBASIC0.02□□□□□ -2.41
GPC3P51654 PCNPP3-201ENST00000393579 471 ntBASIC0.02□□□□□ -2.41
GPC3P51654 MIR548I2-201ENST00000408348 149 ntBASIC0.02□□□□□ -2.41
GPC3P51654 AC141557.1-201ENST00000540982 400 ntBASIC0.02□□□□□ -2.41
GPC3P51654 MIR4667-201ENST00000578933 66 ntBASIC0.02□□□□□ -2.41
GPC3P51654 MIR5706-201ENST00000579841 80 ntBASIC0.02□□□□□ -2.41
GPC3P51654 AL137067.1-201ENST00000615933 120 ntBASIC0.02□□□□□ -2.41
GPC3P51654 AC105081.1-201ENST00000617727 106 ntBASIC0.02□□□□□ -2.41
GPC3P51654 MIR6755-201ENST00000619993 66 ntBASIC0.02□□□□□ -2.41
GPC3P51654 AP001362.1-201ENST00000625165 124 ntBASIC0.02□□□□□ -2.41
GPC3P51654 SNORA63.5-201ENST00000363548 123 ntBASIC0.01□□□□□ -2.41
GPC3P51654 Y_RNA.251-201ENST00000364551 99 ntBASIC0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 215.1 ms