Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 SNORD115-35-201ENST00000365122 82 ntBASIC0.75□□□□□ -2.29
HOXA1P49639 RNY1P8-201ENST00000383970 114 ntBASIC0.75□□□□□ -2.29
HOXA1P49639 MIR34C-201ENST00000384831 77 ntBASIC0.75□□□□□ -2.29
HOXA1P49639 RNU6-447P-201ENST00000410293 104 ntBASIC0.75□□□□□ -2.29
HOXA1P49639 RNU6-1118P-201ENST00000410382 104 ntBASIC0.75□□□□□ -2.29
HOXA1P49639 RNU6-1076P-201ENST00000410397 104 ntBASIC0.75□□□□□ -2.29
HOXA1P49639 RNU6-355P-201ENST00000410427 104 ntBASIC0.75□□□□□ -2.29
HOXA1P49639 RNU6-791P-201ENST00000410467 104 ntBASIC0.75□□□□□ -2.29
HOXA1P49639 RNU6-705P-201ENST00000410601 104 ntBASIC0.75□□□□□ -2.29
HOXA1P49639 RNU6-1100P-201ENST00000410691 104 ntBASIC0.75□□□□□ -2.29
HOXA1P49639 RNU6-860P-201ENST00000410860 104 ntBASIC0.75□□□□□ -2.29
HOXA1P49639 RNU6-1217P-201ENST00000411276 104 ntBASIC0.75□□□□□ -2.29
HOXA1P49639 RNU6-785P-201ENST00000411324 104 ntBASIC0.75□□□□□ -2.29
HOXA1P49639 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.75□□□□□ -2.29
HOXA1P49639 RNU7-48P-201ENST00000458875 63 ntBASIC0.75□□□□□ -2.29
HOXA1P49639 RNU6-313P-201ENST00000516317 112 ntBASIC0.75□□□□□ -2.29
HOXA1P49639 AL670379.3-201ENST00000605040 251 ntBASIC0.75□□□□□ -2.29
HOXA1P49639 U6.90-201ENST00000614007 104 ntBASIC0.75□□□□□ -2.29
HOXA1P49639 MIR376B-201ENST00000614515 100 ntBASIC0.75□□□□□ -2.29
HOXA1P49639 MIR6129-201ENST00000616087 109 ntBASIC0.75□□□□□ -2.29
HOXA1P49639 U6.70-201ENST00000620287 104 ntBASIC0.75□□□□□ -2.29
HOXA1P49639 Y_RNA.35-201ENST00000362601 101 ntBASIC0.74□□□□□ -2.29
HOXA1P49639 RNA5SP205-201ENST00000364653 136 ntBASIC0.74□□□□□ -2.29
HOXA1P49639 RNU2-51P-201ENST00000410708 197 ntBASIC0.74□□□□□ -2.29
HOXA1P49639 AC244098.3-201ENST00000424803 96 ntBASIC0.74□□□□□ -2.29
HOXA1P49639 AC090897.1-201ENST00000580909 226 ntBASIC0.74□□□□□ -2.29
HOXA1P49639 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.74□□□□□ -2.29
HOXA1P49639 AL136317.1-201ENST00000612653 226 ntBASIC0.74□□□□□ -2.29
HOXA1P49639 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
HOXA1P49639 RNU4-67P-201ENST00000364569 141 ntBASIC0.73□□□□□ -2.29
HOXA1P49639 RNU6-865P-201ENST00000364772 107 ntBASIC0.73□□□□□ -2.29
HOXA1P49639 RNY1P2-201ENST00000364820 117 ntBASIC0.73□□□□□ -2.29
HOXA1P49639 Y_RNA.328-201ENST00000365208 113 ntBASIC0.73□□□□□ -2.29
HOXA1P49639 SNORD116-21-201ENST00000384507 92 ntBASIC0.73□□□□□ -2.29
HOXA1P49639 RNU6-429P-201ENST00000384582 108 ntBASIC0.73□□□□□ -2.29
HOXA1P49639 Y_RNA.563-201ENST00000384707 108 ntBASIC0.73□□□□□ -2.29
HOXA1P49639 RNU6-816P-201ENST00000390914 107 ntBASIC0.73□□□□□ -2.29
HOXA1P49639 RNU6-679P-201ENST00000391003 106 ntBASIC0.73□□□□□ -2.29
HOXA1P49639 RNU6-1268P-201ENST00000391214 107 ntBASIC0.73□□□□□ -2.29
HOXA1P49639 RNU6-1239P-201ENST00000391310 107 ntBASIC0.73□□□□□ -2.29
HOXA1P49639 RNU6-321P-201ENST00000410912 106 ntBASIC0.73□□□□□ -2.29
HOXA1P49639 AL606490.4-201ENST00000423117 127 ntBASIC0.73□□□□□ -2.29
HOXA1P49639 RNU6-479P-201ENST00000516348 105 ntBASIC0.73□□□□□ -2.29
HOXA1P49639 MIR4500-201ENST00000579472 76 ntBASIC0.73□□□□□ -2.29
HOXA1P49639 MIR4653-201ENST00000585107 83 ntBASIC0.73□□□□□ -2.29
HOXA1P49639 AL353765.1-201ENST00000605514 183 ntBASIC0.73□□□□□ -2.29
HOXA1P49639 Y_RNA.116-201ENST00000363292 103 ntBASIC0.72□□□□□ -2.29
HOXA1P49639 Y_RNA.155-201ENST00000363632 101 ntBASIC0.72□□□□□ -2.29
HOXA1P49639 SNORD114-2-201ENST00000363953 78 ntBASIC0.72□□□□□ -2.29
HOXA1P49639 MIR573-201ENST00000384964 99 ntBASIC0.72□□□□□ -2.29
HOXA1P49639 BX276092.1-201ENST00000427368 251 ntBASIC0.72□□□□□ -2.29
HOXA1P49639 AC211469.2-201ENST00000605461 205 ntBASIC0.72□□□□□ -2.29
HOXA1P49639 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
HOXA1P49639 Y_RNA.164-201ENST00000363709 102 ntBASIC0.71□□□□□ -2.3
HOXA1P49639 Y_RNA.247-201ENST00000364500 92 ntBASIC0.71□□□□□ -2.3
HOXA1P49639 RNU6-476P-201ENST00000384726 107 ntBASIC0.71□□□□□ -2.3
HOXA1P49639 MIR532-201ENST00000385025 91 ntBASIC0.71□□□□□ -2.3
HOXA1P49639 RNA5SP222-201ENST00000411039 105 ntBASIC0.71□□□□□ -2.3
HOXA1P49639 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.71□□□□□ -2.3
HOXA1P49639 MIR3612-201ENST00000579753 87 ntBASIC0.71□□□□□ -2.3
HOXA1P49639 AL162726.3-218ENST00000636401 95 ntBASIC0.71□□□□□ -2.3
HOXA1P49639 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.71□□□□□ -2.3
HOXA1P49639 HSBP1P2-201ENST00000299671 229 ntBASIC0.7□□□□□ -2.3
HOXA1P49639 RNU6-363P-201ENST00000362895 105 ntBASIC0.7□□□□□ -2.3
HOXA1P49639 RNU6-1144P-201ENST00000384247 104 ntBASIC0.7□□□□□ -2.3
HOXA1P49639 RNU6-291P-201ENST00000384720 107 ntBASIC0.7□□□□□ -2.3
HOXA1P49639 MIR608-201ENST00000384820 100 ntBASIC0.7□□□□□ -2.3
HOXA1P49639 RNU6-1064P-201ENST00000410626 104 ntBASIC0.7□□□□□ -2.3
HOXA1P49639 RNU6-1194P-201ENST00000516208 104 ntBASIC0.7□□□□□ -2.3
HOXA1P49639 Y_RNA.697-201ENST00000516776 113 ntBASIC0.7□□□□□ -2.3
HOXA1P49639 RNU6-448P-201ENST00000517052 107 ntBASIC0.7□□□□□ -2.3
HOXA1P49639 AC025627.3-201ENST00000582078 182 ntBASIC0.7□□□□□ -2.3
HOXA1P49639 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.7□□□□□ -2.3
HOXA1P49639 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.7□□□□□ -2.3
HOXA1P49639 AL512310.12-203ENST00000640543 90 ntBASIC0.7□□□□□ -2.3
HOXA1P49639 Y_RNA.32-201ENST00000362589 110 ntBASIC0.69□□□□□ -2.3
HOXA1P49639 RNU6-1290P-201ENST00000362957 109 ntBASIC0.69□□□□□ -2.3
HOXA1P49639 Y_RNA.98-201ENST00000363109 102 ntBASIC0.69□□□□□ -2.3
HOXA1P49639 RNU4-58P-201ENST00000363192 141 ntBASIC0.69□□□□□ -2.3
HOXA1P49639 RNA5SP245-201ENST00000364239 121 ntBASIC0.69□□□□□ -2.3
HOXA1P49639 RNU6-409P-201ENST00000384114 104 ntBASIC0.69□□□□□ -2.3
HOXA1P49639 AC002350.1-201ENST00000490759 375 ntBASIC0.69□□□□□ -2.3
HOXA1P49639 PSMC1P5-201ENST00000512850 177 ntBASIC0.69□□□□□ -2.3
HOXA1P49639 Y_RNA.676-201ENST00000516393 96 ntBASIC0.69□□□□□ -2.3
HOXA1P49639 AP001362.1-201ENST00000625165 124 ntBASIC0.69□□□□□ -2.3
HOXA1P49639 Y_RNA.85-201ENST00000363014 111 ntBASIC0.68□□□□□ -2.3
HOXA1P49639 U8.6-201ENST00000364939 135 ntBASIC0.68□□□□□ -2.3
HOXA1P49639 RNU6-53P-201ENST00000365367 106 ntBASIC0.68□□□□□ -2.3
HOXA1P49639 Y_RNA.360-201ENST00000365512 102 ntBASIC0.68□□□□□ -2.3
HOXA1P49639 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
HOXA1P49639 Y_RNA.507-201ENST00000384500 99 ntBASIC0.68□□□□□ -2.3
HOXA1P49639 RNU6-535P-201ENST00000384722 107 ntBASIC0.68□□□□□ -2.3
HOXA1P49639 MIR644A-201ENST00000385262 94 ntBASIC0.68□□□□□ -2.3
HOXA1P49639 RNU6-733P-201ENST00000410759 104 ntBASIC0.68□□□□□ -2.3
HOXA1P49639 SNORA31.14-201ENST00000516728 116 ntBASIC0.68□□□□□ -2.3
HOXA1P49639 AC068339.1-201ENST00000526965 141 ntBASIC0.68□□□□□ -2.3
HOXA1P49639 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.68□□□□□ -2.3
HOXA1P49639 Y_RNA.4-201ENST00000362333 112 ntBASIC0.67□□□□□ -2.3
HOXA1P49639 SNORA36.2-201ENST00000384004 127 ntBASIC0.67□□□□□ -2.3
HOXA1P49639 RNU6-880P-201ENST00000384526 107 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 220.9 ms