Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 SNORD79.1-201ENST00000516069 84 ntBASIC1.53□□□□□ -2.16
COL6A2P12110 AC012531.4-201ENST00000616509 177 ntBASIC1.53□□□□□ -2.16
COL6A2P12110 AC008163.1-202ENST00000636004 2889 ntBASIC1.53□□□□□ -2.16
COL6A2P12110 Y_RNA.96-201ENST00000363092 109 ntBASIC1.52□□□□□ -2.17
COL6A2P12110 SNORD38.2-201ENST00000384470 69 ntBASIC1.52□□□□□ -2.17
COL6A2P12110 SNORA2B-201ENST00000384583 137 ntBASIC1.52□□□□□ -2.17
COL6A2P12110 MIR320A-201ENST00000385302 82 ntBASIC1.52□□□□□ -2.17
COL6A2P12110 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
COL6A2P12110 RNU6-910P-201ENST00000390844 107 ntBASIC1.52□□□□□ -2.17
COL6A2P12110 MRPL35P3-201ENST00000421557 364 ntBASIC1.52□□□□□ -2.17
COL6A2P12110 AC023790.1-201ENST00000482174 347 ntBASIC1.52□□□□□ -2.17
COL6A2P12110 MIR4777-201ENST00000583710 86 ntBASIC1.52□□□□□ -2.17
COL6A2P12110 AC106800.4-201ENST00000614905 153 ntBASIC1.52□□□□□ -2.17
COL6A2P12110 HSBP1P2-201ENST00000299671 229 ntBASIC1.51□□□□□ -2.17
COL6A2P12110 RNU6-1255P-201ENST00000363434 112 ntBASIC1.51□□□□□ -2.17
COL6A2P12110 RNU6-60P-201ENST00000364792 103 ntBASIC1.51□□□□□ -2.17
COL6A2P12110 SNORA25.9-201ENST00000365087 128 ntBASIC1.51□□□□□ -2.17
COL6A2P12110 Y_RNA.330-201ENST00000365230 109 ntBASIC1.51□□□□□ -2.17
COL6A2P12110 MIR517C-201ENST00000385103 95 ntBASIC1.51□□□□□ -2.17
COL6A2P12110 SNORD12-201ENST00000391002 90 ntBASIC1.51□□□□□ -2.17
COL6A2P12110 TRMT112P2-201ENST00000512910 132 ntBASIC1.51□□□□□ -2.17
COL6A2P12110 Y_RNA.659-201ENST00000515994 113 ntBASIC1.51□□□□□ -2.17
COL6A2P12110 AC138749.4-201ENST00000563970 127 ntBASIC1.51□□□□□ -2.17
COL6A2P12110 MIR5582-201ENST00000579697 68 ntBASIC1.51□□□□□ -2.17
COL6A2P12110 BX248123.2-201ENST00000606318 124 ntBASIC1.51□□□□□ -2.17
COL6A2P12110 MIR1304-201ENST00000408243 91 ntBASIC1.5□□□□□ -2.17
COL6A2P12110 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.5□□□□□ -2.17
COL6A2P12110 RNU7-90P-201ENST00000459216 62 ntBASIC1.5□□□□□ -2.17
COL6A2P12110 RNU6-795P-201ENST00000516323 103 ntBASIC1.5□□□□□ -2.17
COL6A2P12110 AL359821.1-201ENST00000605519 182 ntBASIC1.5□□□□□ -2.17
COL6A2P12110 RNU6-90P-201ENST00000606352 106 ntBASIC1.5□□□□□ -2.17
COL6A2P12110 AC091304.10-201ENST00000641554 121 ntBASIC1.5□□□□□ -2.17
COL6A2P12110 RNU6-1163P-201ENST00000364516 107 ntBASIC1.49□□□□□ -2.17
COL6A2P12110 RNU1-36P-201ENST00000365130 165 ntBASIC1.49□□□□□ -2.17
COL6A2P12110 MIR518E-201ENST00000385252 88 ntBASIC1.49□□□□□ -2.17
COL6A2P12110 SNORA67.5-201ENST00000391036 107 ntBASIC1.49□□□□□ -2.17
COL6A2P12110 MIR548G-201ENST00000408442 89 ntBASIC1.49□□□□□ -2.17
COL6A2P12110 RNY4P30-201ENST00000410216 95 ntBASIC1.49□□□□□ -2.17
COL6A2P12110 SNORA70.22-201ENST00000517160 124 ntBASIC1.49□□□□□ -2.17
COL6A2P12110 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.49□□□□□ -2.17
COL6A2P12110 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
COL6A2P12110 Y_RNA.173-201ENST00000363776 113 ntBASIC1.48□□□□□ -2.17
COL6A2P12110 RNU1-42P-201ENST00000364033 160 ntBASIC1.48□□□□□ -2.17
COL6A2P12110 RNU6-934P-201ENST00000365154 107 ntBASIC1.48□□□□□ -2.17
COL6A2P12110 Y_RNA.588-201ENST00000391254 102 ntBASIC1.48□□□□□ -2.17
COL6A2P12110 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.48□□□□□ -2.17
COL6A2P12110 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.48□□□□□ -2.17
COL6A2P12110 MIR4491-201ENST00000581087 68 ntBASIC1.48□□□□□ -2.17
COL6A2P12110 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.48□□□□□ -2.17
COL6A2P12110 MIR489-201ENST00000384923 84 ntBASIC1.47□□□□□ -2.17
COL6A2P12110 RNU4-62P-201ENST00000410125 130 ntBASIC1.47□□□□□ -2.17
COL6A2P12110 AP1B1P2-201ENST00000416196 106 ntBASIC1.47□□□□□ -2.17
COL6A2P12110 AC109327.2-201ENST00000448339 378 ntBASIC1.47□□□□□ -2.17
COL6A2P12110 RNU7-185P-201ENST00000459215 60 ntBASIC1.47□□□□□ -2.17
COL6A2P12110 MIR548Z-201ENST00000584743 97 ntBASIC1.47□□□□□ -2.17
COL6A2P12110 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.47□□□□□ -2.17
COL6A2P12110 MIR7974-201ENST00000615835 79 ntBASIC1.47□□□□□ -2.17
COL6A2P12110 Y_RNA.119-201ENST00000363301 96 ntBASIC1.46□□□□□ -2.18
COL6A2P12110 RNA5SP133-201ENST00000363368 119 ntBASIC1.46□□□□□ -2.18
COL6A2P12110 Y_RNA.342-201ENST00000365352 113 ntBASIC1.46□□□□□ -2.18
COL6A2P12110 MIR488-201ENST00000365739 83 ntBASIC1.46□□□□□ -2.18
COL6A2P12110 RNU6-813P-201ENST00000384691 107 ntBASIC1.46□□□□□ -2.18
COL6A2P12110 RNU6-644P-201ENST00000391155 98 ntBASIC1.46□□□□□ -2.18
COL6A2P12110 RNU6-972P-201ENST00000391208 107 ntBASIC1.46□□□□□ -2.18
COL6A2P12110 SNORD93-201ENST00000408813 74 ntBASIC1.46□□□□□ -2.18
COL6A2P12110 snoU13.21-201ENST00000459368 105 ntBASIC1.46□□□□□ -2.18
COL6A2P12110 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.46□□□□□ -2.18
COL6A2P12110 RNU7-61P-201ENST00000515897 61 ntBASIC1.46□□□□□ -2.18
COL6A2P12110 Y_RNA.705-201ENST00000516862 110 ntBASIC1.46□□□□□ -2.18
COL6A2P12110 MALAT1.1-201ENST00000618249 95 ntBASIC1.46□□□□□ -2.18
COL6A2P12110 U6.109-201ENST00000636749 87 ntBASIC1.46□□□□□ -2.18
COL6A2P12110 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
COL6A2P12110 MIR26B-201ENST00000362251 77 ntBASIC1.45□□□□□ -2.18
COL6A2P12110 Y_RNA.467-201ENST00000384297 102 ntBASIC1.45□□□□□ -2.18
COL6A2P12110 Y_RNA.567-201ENST00000384736 106 ntBASIC1.45□□□□□ -2.18
COL6A2P12110 SPINT5P-201ENST00000448174 155 ntBASIC1.45□□□□□ -2.18
COL6A2P12110 RNU6-1194P-201ENST00000516208 104 ntBASIC1.45□□□□□ -2.18
COL6A2P12110 AL512598.1-201ENST00000610158 273 ntBASIC1.45□□□□□ -2.18
COL6A2P12110 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
COL6A2P12110 AC023934.1-201ENST00000574529 2389 ntBASIC1.44□□□□□ -2.18
COL6A2P12110 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
COL6A2P12110 Y_RNA.220-201ENST00000364244 109 ntBASIC1.44□□□□□ -2.18
COL6A2P12110 MIR150-201ENST00000385048 84 ntBASIC1.44□□□□□ -2.18
COL6A2P12110 SNORD83.1-201ENST00000411362 77 ntBASIC1.44□□□□□ -2.18
COL6A2P12110 RPS26P5-201ENST00000418544 335 ntBASIC1.44□□□□□ -2.18
COL6A2P12110 MTND5P40-201ENST00000559945 246 ntBASIC1.44□□□□□ -2.18
COL6A2P12110 AC023827.1-201ENST00000569247 97 ntBASIC1.44□□□□□ -2.18
COL6A2P12110 SNORD53B-201ENST00000577887 78 ntBASIC1.44□□□□□ -2.18
COL6A2P12110 AC090897.1-201ENST00000580909 226 ntBASIC1.44□□□□□ -2.18
COL6A2P12110 MIR4303-201ENST00000581299 66 ntBASIC1.44□□□□□ -2.18
COL6A2P12110 SNORA25.8-201ENST00000364831 128 ntBASIC1.43□□□□□ -2.18
COL6A2P12110 RNU6-1131P-201ENST00000364955 107 ntBASIC1.43□□□□□ -2.18
COL6A2P12110 MIR1257-201ENST00000408490 117 ntBASIC1.43□□□□□ -2.18
COL6A2P12110 RNU6-887P-201ENST00000410660 100 ntBASIC1.43□□□□□ -2.18
COL6A2P12110 snoU13.18-201ENST00000459483 104 ntBASIC1.43□□□□□ -2.18
COL6A2P12110 SNORA31.24-201ENST00000517232 57 ntBASIC1.43□□□□□ -2.18
COL6A2P12110 MIR4500-201ENST00000579472 76 ntBASIC1.43□□□□□ -2.18
COL6A2P12110 RNU6-86P-201ENST00000606534 107 ntBASIC1.43□□□□□ -2.18
COL6A2P12110 RNU4-58P-201ENST00000363192 141 ntBASIC1.42□□□□□ -2.18
COL6A2P12110 RNU6-1244P-201ENST00000363614 108 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 205 ms