Protein–RNA interactions for Protein: P05556

ITGB1, Integrin beta-1, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1P05556 RNU6-1163P-201ENST00000364516 107 ntBASIC1.58□□□□□ -2.16
ITGB1P05556 RNU6-1065P-201ENST00000384513 106 ntBASIC1.58□□□□□ -2.16
ITGB1P05556 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.58□□□□□ -2.16
ITGB1P05556 RNA5SP237-201ENST00000410414 113 ntBASIC1.58□□□□□ -2.16
ITGB1P05556 RNU6-887P-201ENST00000410660 100 ntBASIC1.58□□□□□ -2.16
ITGB1P05556 RNU6-165P-201ENST00000517170 99 ntBASIC1.58□□□□□ -2.16
ITGB1P05556 MIR3664-201ENST00000579074 99 ntBASIC1.58□□□□□ -2.16
ITGB1P05556 MIR3937-201ENST00000580135 106 ntBASIC1.58□□□□□ -2.16
ITGB1P05556 AL662814.1-201ENST00000617364 121 ntBASIC1.58□□□□□ -2.16
ITGB1P05556 AL353770.2-201ENST00000620024 78 ntBASIC1.58□□□□□ -2.16
ITGB1P05556 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
ITGB1P05556 SNORD38.1-201ENST00000363863 68 ntBASIC1.57□□□□□ -2.16
ITGB1P05556 RNU6-53P-201ENST00000365367 106 ntBASIC1.57□□□□□ -2.16
ITGB1P05556 MIR1304-201ENST00000408243 91 ntBASIC1.57□□□□□ -2.16
ITGB1P05556 RPS27P16-201ENST00000425758 201 ntBASIC1.57□□□□□ -2.16
ITGB1P05556 RPL39P39-201ENST00000455840 151 ntBASIC1.57□□□□□ -2.16
ITGB1P05556 AL512310.8-201ENST00000550183 120 ntBASIC1.57□□□□□ -2.16
ITGB1P05556 MIR4422-201ENST00000581938 83 ntBASIC1.57□□□□□ -2.16
ITGB1P05556 MIR4452-201ENST00000583004 71 ntBASIC1.57□□□□□ -2.16
ITGB1P05556 RNU6-820P-201ENST00000384273 107 ntBASIC1.56□□□□□ -2.16
ITGB1P05556 RNU6-813P-201ENST00000384691 107 ntBASIC1.56□□□□□ -2.16
ITGB1P05556 U8.15-201ENST00000390947 134 ntBASIC1.56□□□□□ -2.16
ITGB1P05556 RNU6-972P-201ENST00000391208 107 ntBASIC1.56□□□□□ -2.16
ITGB1P05556 RNU1-78P-201ENST00000391248 165 ntBASIC1.56□□□□□ -2.16
ITGB1P05556 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.56□□□□□ -2.16
ITGB1P05556 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.56□□□□□ -2.16
ITGB1P05556 RNU7-48P-201ENST00000458875 63 ntBASIC1.56□□□□□ -2.16
ITGB1P05556 snoU13.2-201ENST00000459201 104 ntBASIC1.56□□□□□ -2.16
ITGB1P05556 AC103810.7-201ENST00000607821 91 ntBASIC1.56□□□□□ -2.16
ITGB1P05556 MIR588-201ENST00000384900 83 ntBASIC1.55□□□□□ -2.16
ITGB1P05556 RNU6-205P-201ENST00000390858 107 ntBASIC1.55□□□□□ -2.16
ITGB1P05556 MIR548G-201ENST00000408442 89 ntBASIC1.55□□□□□ -2.16
ITGB1P05556 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.55□□□□□ -2.16
ITGB1P05556 MIR4439-201ENST00000583746 80 ntBASIC1.55□□□□□ -2.16
ITGB1P05556 MIR6740-201ENST00000618268 113 ntBASIC1.55□□□□□ -2.16
ITGB1P05556 MIR1245B-201ENST00000636115 69 ntBASIC1.55□□□□□ -2.16
ITGB1P05556 Y_RNA.73-201ENST00000362910 113 ntBASIC1.54□□□□□ -2.16
ITGB1P05556 Y_RNA.96-201ENST00000363092 109 ntBASIC1.54□□□□□ -2.16
ITGB1P05556 Y_RNA.98-201ENST00000363109 102 ntBASIC1.54□□□□□ -2.16
ITGB1P05556 SNORD58A-201ENST00000383875 65 ntBASIC1.54□□□□□ -2.16
ITGB1P05556 RNU6-402P-201ENST00000410678 103 ntBASIC1.54□□□□□ -2.16
ITGB1P05556 SPINT5P-201ENST00000448174 155 ntBASIC1.54□□□□□ -2.16
ITGB1P05556 AL133373.1-201ENST00000497098 94 ntBASIC1.54□□□□□ -2.16
ITGB1P05556 RNU6-267P-201ENST00000516714 103 ntBASIC1.54□□□□□ -2.16
ITGB1P05556 RNU6-396P-201ENST00000365369 105 ntBASIC1.53□□□□□ -2.16
ITGB1P05556 RNU6-949P-201ENST00000384040 107 ntBASIC1.53□□□□□ -2.16
ITGB1P05556 RNU6-1152P-201ENST00000384576 107 ntBASIC1.53□□□□□ -2.16
ITGB1P05556 Y_RNA.567-201ENST00000384736 106 ntBASIC1.53□□□□□ -2.16
ITGB1P05556 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
ITGB1P05556 MIR1185-1-201ENST00000408598 86 ntBASIC1.53□□□□□ -2.16
ITGB1P05556 RNU6-447P-201ENST00000410293 104 ntBASIC1.53□□□□□ -2.16
ITGB1P05556 RNU6-1118P-201ENST00000410382 104 ntBASIC1.53□□□□□ -2.16
ITGB1P05556 RNU6-1076P-201ENST00000410397 104 ntBASIC1.53□□□□□ -2.16
ITGB1P05556 RNU6-355P-201ENST00000410427 104 ntBASIC1.53□□□□□ -2.16
ITGB1P05556 RNU6-791P-201ENST00000410467 104 ntBASIC1.53□□□□□ -2.16
ITGB1P05556 RNU6-705P-201ENST00000410601 104 ntBASIC1.53□□□□□ -2.16
ITGB1P05556 RNU6-1100P-201ENST00000410691 104 ntBASIC1.53□□□□□ -2.16
ITGB1P05556 RNU6-860P-201ENST00000410860 104 ntBASIC1.53□□□□□ -2.16
ITGB1P05556 RNU6-1217P-201ENST00000411276 104 ntBASIC1.53□□□□□ -2.16
ITGB1P05556 RNU6-785P-201ENST00000411324 104 ntBASIC1.53□□□□□ -2.16
ITGB1P05556 RPS29P23-201ENST00000458635 123 ntBASIC1.53□□□□□ -2.16
ITGB1P05556 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
ITGB1P05556 AC020891.4-201ENST00000605745 93 ntBASIC1.53□□□□□ -2.16
ITGB1P05556 RNU6-90P-201ENST00000606352 106 ntBASIC1.53□□□□□ -2.16
ITGB1P05556 uc_338.6-201ENST00000613544 171 ntBASIC1.53□□□□□ -2.16
ITGB1P05556 U6.90-201ENST00000614007 104 ntBASIC1.53□□□□□ -2.16
ITGB1P05556 U6.70-201ENST00000620287 104 ntBASIC1.53□□□□□ -2.16
ITGB1P05556 RNU6-1244P-201ENST00000363614 108 ntBASIC1.52□□□□□ -2.17
ITGB1P05556 RNY1P1-201ENST00000364372 112 ntBASIC1.52□□□□□ -2.17
ITGB1P05556 SNORD114-22-201ENST00000365423 72 ntBASIC1.52□□□□□ -2.17
ITGB1P05556 MIR563-201ENST00000385080 79 ntBASIC1.52□□□□□ -2.17
ITGB1P05556 MIR320A-201ENST00000385302 82 ntBASIC1.52□□□□□ -2.17
ITGB1P05556 RNU6-902P-201ENST00000517212 91 ntBASIC1.52□□□□□ -2.17
ITGB1P05556 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.52□□□□□ -2.17
ITGB1P05556 AC133485.1-201ENST00000567176 124 ntBASIC1.52□□□□□ -2.17
ITGB1P05556 IGLL4P-201ENST00000614590 133 ntBASIC1.52□□□□□ -2.17
ITGB1P05556 AC012676.2-201ENST00000619258 186 ntBASIC1.52□□□□□ -2.17
ITGB1P05556 AP001362.1-201ENST00000625165 124 ntBASIC1.52□□□□□ -2.17
ITGB1P05556 RNA5SP264-201ENST00000363115 107 ntBASIC1.51□□□□□ -2.17
ITGB1P05556 RNU6-654P-201ENST00000364373 107 ntBASIC1.51□□□□□ -2.17
ITGB1P05556 RNA5SP95-201ENST00000410319 137 ntBASIC1.51□□□□□ -2.17
ITGB1P05556 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.51□□□□□ -2.17
ITGB1P05556 AC022137.1-201ENST00000483735 151 ntBASIC1.51□□□□□ -2.17
ITGB1P05556 RNU11-2P-201ENST00000516898 142 ntBASIC1.51□□□□□ -2.17
ITGB1P05556 MTND5P40-201ENST00000559945 246 ntBASIC1.51□□□□□ -2.17
ITGB1P05556 AP000753.3-201ENST00000604083 169 ntBASIC1.51□□□□□ -2.17
ITGB1P05556 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.51□□□□□ -2.17
ITGB1P05556 MIR6516-201ENST00000630554 81 ntBASIC1.51□□□□□ -2.17
ITGB1P05556 MIR30D-201ENST00000362283 70 ntBASIC1.5□□□□□ -2.17
ITGB1P05556 SNORD116-10-201ENST00000363791 102 ntBASIC1.5□□□□□ -2.17
ITGB1P05556 RNU6-219P-201ENST00000364728 107 ntBASIC1.5□□□□□ -2.17
ITGB1P05556 SNORD116-22-201ENST00000384430 92 ntBASIC1.5□□□□□ -2.17
ITGB1P05556 MT-TN-201ENST00000387400 73 ntBASIC1.5□□□□□ -2.17
ITGB1P05556 RNU6-955P-201ENST00000410497 104 ntBASIC1.5□□□□□ -2.17
ITGB1P05556 RNU6-1054P-201ENST00000411293 104 ntBASIC1.5□□□□□ -2.17
ITGB1P05556 RNU7-62P-201ENST00000458856 62 ntBASIC1.5□□□□□ -2.17
ITGB1P05556 MIR6078-201ENST00000611069 100 ntBASIC1.5□□□□□ -2.17
ITGB1P05556 MIR103A2-201ENST00000362154 78 ntBASIC1.49□□□□□ -2.17
ITGB1P05556 MIR96-201ENST00000362288 78 ntBASIC1.49□□□□□ -2.17
ITGB1P05556 Y_RNA.173-201ENST00000363776 113 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 211.3 ms