Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 SNORA26.9-201ENST00000391322 122 ntBASIC1.96□□□□□ -2.1
PDGFAP04085 AC022137.1-201ENST00000483735 151 ntBASIC1.96□□□□□ -2.1
PDGFAP04085 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
PDGFAP04085 RNU6-219P-201ENST00000364728 107 ntBASIC1.95□□□□□ -2.1
PDGFAP04085 RNU6-242P-201ENST00000384359 107 ntBASIC1.95□□□□□ -2.1
PDGFAP04085 Y_RNA.609-201ENST00000410669 89 ntBASIC1.95□□□□□ -2.1
PDGFAP04085 Y_RNA.620-201ENST00000411009 88 ntBASIC1.95□□□□□ -2.1
PDGFAP04085 SNORA31.2-201ENST00000516019 134 ntBASIC1.95□□□□□ -2.1
PDGFAP04085 RNU1-40P-201ENST00000516816 164 ntBASIC1.95□□□□□ -2.1
PDGFAP04085 RNU1-97P-201ENST00000516872 164 ntBASIC1.95□□□□□ -2.1
PDGFAP04085 RNU6-902P-201ENST00000517212 91 ntBASIC1.95□□□□□ -2.1
PDGFAP04085 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
PDGFAP04085 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.95□□□□□ -2.1
PDGFAP04085 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.94□□□□□ -2.1
PDGFAP04085 Y_RNA.57-201ENST00000362806 113 ntBASIC1.94□□□□□ -2.1
PDGFAP04085 RNU4-58P-201ENST00000363192 141 ntBASIC1.94□□□□□ -2.1
PDGFAP04085 SNORD113.3-201ENST00000364630 78 ntBASIC1.94□□□□□ -2.1
PDGFAP04085 RNU1-36P-201ENST00000365130 165 ntBASIC1.94□□□□□ -2.1
PDGFAP04085 RNU6-573P-201ENST00000383938 106 ntBASIC1.94□□□□□ -2.1
PDGFAP04085 RNU6-592P-201ENST00000411333 103 ntBASIC1.94□□□□□ -2.1
PDGFAP04085 RNU6-850P-201ENST00000516934 103 ntBASIC1.94□□□□□ -2.1
PDGFAP04085 MIR4491-201ENST00000581087 68 ntBASIC1.94□□□□□ -2.1
PDGFAP04085 AC025521.1-201ENST00000621624 286 ntBASIC1.94□□□□□ -2.1
PDGFAP04085 MIR6132-201ENST00000622083 109 ntBASIC1.94□□□□□ -2.1
PDGFAP04085 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.94□□□□□ -2.1
PDGFAP04085 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
PDGFAP04085 Y_RNA.783-201ENST00000613546 102 ntBASIC1.93□□□□□ -2.1
PDGFAP04085 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.93□□□□□ -2.1
PDGFAP04085 MIR1245B-201ENST00000636115 69 ntBASIC1.93□□□□□ -2.1
PDGFAP04085 AC023934.1-201ENST00000574529 2389 ntBASIC1.93□□□□□ -2.1
PDGFAP04085 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.93□□□□□ -2.1
PDGFAP04085 Y_RNA.219-201ENST00000364232 113 ntBASIC1.92□□□□□ -2.1
PDGFAP04085 MIR1257-201ENST00000408490 117 ntBASIC1.92□□□□□ -2.1
PDGFAP04085 BX276092.1-201ENST00000427368 251 ntBASIC1.92□□□□□ -2.1
PDGFAP04085 AL161932.1-201ENST00000437408 146 ntBASIC1.92□□□□□ -2.1
PDGFAP04085 RNU6-267P-201ENST00000516714 103 ntBASIC1.92□□□□□ -2.1
PDGFAP04085 AP003327.1-201ENST00000529684 127 ntBASIC1.92□□□□□ -2.1
PDGFAP04085 Y_RNA.73-201ENST00000362910 113 ntBASIC1.91□□□□□ -2.1
PDGFAP04085 RNU6-403P-201ENST00000363163 104 ntBASIC1.91□□□□□ -2.1
PDGFAP04085 SNORA72.6-201ENST00000384520 129 ntBASIC1.91□□□□□ -2.1
PDGFAP04085 SNORA75.2-201ENST00000391138 150 ntBASIC1.91□□□□□ -2.1
PDGFAP04085 SNORA75.3-201ENST00000391231 150 ntBASIC1.91□□□□□ -2.1
PDGFAP04085 Y_RNA.588-201ENST00000391254 102 ntBASIC1.91□□□□□ -2.1
PDGFAP04085 AL591704.2-201ENST00000421658 181 ntBASIC1.91□□□□□ -2.1
PDGFAP04085 RNU7-185P-201ENST00000459215 60 ntBASIC1.91□□□□□ -2.1
PDGFAP04085 AC012493.3-201ENST00000604494 112 ntBASIC1.91□□□□□ -2.1
PDGFAP04085 AC020891.4-201ENST00000605745 93 ntBASIC1.91□□□□□ -2.1
PDGFAP04085 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.91□□□□□ -2.1
PDGFAP04085 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.91□□□□□ -2.1
PDGFAP04085 Y_RNA.226-201ENST00000364337 114 ntBASIC1.9□□□□□ -2.11
PDGFAP04085 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.9□□□□□ -2.11
PDGFAP04085 RNU4-83P-201ENST00000410863 133 ntBASIC1.9□□□□□ -2.11
PDGFAP04085 AC025033.1-201ENST00000463883 194 ntBASIC1.9□□□□□ -2.11
PDGFAP04085 RNU6-531P-201ENST00000516694 104 ntBASIC1.9□□□□□ -2.11
PDGFAP04085 SNORA25.16-201ENST00000516741 121 ntBASIC1.9□□□□□ -2.11
PDGFAP04085 AC036111.3-201ENST00000526389 112 ntBASIC1.9□□□□□ -2.11
PDGFAP04085 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.9□□□□□ -2.11
PDGFAP04085 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.9□□□□□ -2.11
PDGFAP04085 RNU6-934P-201ENST00000365154 107 ntBASIC1.89□□□□□ -2.11
PDGFAP04085 RNU6-497P-201ENST00000365316 104 ntBASIC1.89□□□□□ -2.11
PDGFAP04085 MIR583-201ENST00000384846 75 ntBASIC1.89□□□□□ -2.11
PDGFAP04085 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
PDGFAP04085 SNORA17.3-201ENST00000391159 129 ntBASIC1.89□□□□□ -2.11
PDGFAP04085 SUMO2P12-201ENST00000405924 140 ntBASIC1.89□□□□□ -2.11
PDGFAP04085 SNORD111-201ENST00000408139 94 ntBASIC1.89□□□□□ -2.11
PDGFAP04085 SNORD83.1-201ENST00000411362 77 ntBASIC1.89□□□□□ -2.11
PDGFAP04085 RNU6-1194P-201ENST00000516208 104 ntBASIC1.89□□□□□ -2.11
PDGFAP04085 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
PDGFAP04085 RNU6-1276P-201ENST00000365372 104 ntBASIC1.88□□□□□ -2.11
PDGFAP04085 SNORA80D-201ENST00000384488 135 ntBASIC1.88□□□□□ -2.11
PDGFAP04085 SNORA40.18-201ENST00000391200 128 ntBASIC1.88□□□□□ -2.11
PDGFAP04085 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.88□□□□□ -2.11
PDGFAP04085 RNU6-519P-201ENST00000410590 108 ntBASIC1.88□□□□□ -2.11
PDGFAP04085 AC108667.1-201ENST00000428618 249 ntBASIC1.88□□□□□ -2.11
PDGFAP04085 snoU13.21-201ENST00000459368 105 ntBASIC1.88□□□□□ -2.11
PDGFAP04085 RNU6-1053P-201ENST00000515930 101 ntBASIC1.88□□□□□ -2.11
PDGFAP04085 MIR4498-201ENST00000577599 66 ntBASIC1.88□□□□□ -2.11
PDGFAP04085 MIR5588-201ENST00000581890 63 ntBASIC1.88□□□□□ -2.11
PDGFAP04085 AC106800.4-201ENST00000614905 153 ntBASIC1.88□□□□□ -2.11
PDGFAP04085 MIR7111-201ENST00000619751 72 ntBASIC1.88□□□□□ -2.11
PDGFAP04085 RNU6-633P-201ENST00000362612 103 ntBASIC1.87□□□□□ -2.11
PDGFAP04085 RNU6-509P-201ENST00000363519 107 ntBASIC1.87□□□□□ -2.11
PDGFAP04085 Y_RNA.426-201ENST00000384068 113 ntBASIC1.87□□□□□ -2.11
PDGFAP04085 SNORA48.3-201ENST00000391081 134 ntBASIC1.87□□□□□ -2.11
PDGFAP04085 AL512598.1-201ENST00000610158 273 ntBASIC1.87□□□□□ -2.11
PDGFAP04085 MIR3202-2-201ENST00000635980 79 ntBASIC1.87□□□□□ -2.11
PDGFAP04085 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
PDGFAP04085 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
PDGFAP04085 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
PDGFAP04085 RNU6-979P-201ENST00000383896 107 ntBASIC1.86□□□□□ -2.11
PDGFAP04085 MIR1287-201ENST00000408492 90 ntBASIC1.86□□□□□ -2.11
PDGFAP04085 Y_RNA.611-201ENST00000410682 108 ntBASIC1.86□□□□□ -2.11
PDGFAP04085 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.86□□□□□ -2.11
PDGFAP04085 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.86□□□□□ -2.11
PDGFAP04085 ZNF355P-201ENST00000427301 3216 ntBASIC1.86□□□□□ -2.11
PDGFAP04085 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
PDGFAP04085 MIR101-2-201ENST00000362195 79 ntBASIC1.85□□□□□ -2.11
PDGFAP04085 Y_RNA.191-201ENST00000363972 113 ntBASIC1.85□□□□□ -2.11
PDGFAP04085 Y_RNA.363-201ENST00000365529 113 ntBASIC1.85□□□□□ -2.11
PDGFAP04085 RNU6-910P-201ENST00000390844 107 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 425.4 ms