Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.14□□□□□ -2.23
COL2A1P02458 RNU7-79P-201ENST00000516082 62 ntBASIC1.14□□□□□ -2.23
COL2A1P02458 RN7SKP12-201ENST00000516275 143 ntBASIC1.14□□□□□ -2.23
COL2A1P02458 SNORD67.1-201ENST00000516618 108 ntBASIC1.14□□□□□ -2.23
COL2A1P02458 SNORA74.3-201ENST00000517108 154 ntBASIC1.14□□□□□ -2.23
COL2A1P02458 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.14□□□□□ -2.23
COL2A1P02458 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.14□□□□□ -2.23
COL2A1P02458 IGLL4P-201ENST00000614590 133 ntBASIC1.14□□□□□ -2.23
COL2A1P02458 SNORD115-19-201ENST00000363098 82 ntBASIC1.13□□□□□ -2.23
COL2A1P02458 SNORD115-18-201ENST00000363293 82 ntBASIC1.13□□□□□ -2.23
COL2A1P02458 RNY1P1-201ENST00000364372 112 ntBASIC1.13□□□□□ -2.23
COL2A1P02458 SNORD115-17-201ENST00000364612 82 ntBASIC1.13□□□□□ -2.23
COL2A1P02458 MIR34C-201ENST00000384831 77 ntBASIC1.13□□□□□ -2.23
COL2A1P02458 SNORD77B-201ENST00000391112 67 ntBASIC1.13□□□□□ -2.23
COL2A1P02458 MIR1302-4-201ENST00000408701 150 ntBASIC1.13□□□□□ -2.23
COL2A1P02458 RNU1-98P-201ENST00000458992 160 ntBASIC1.13□□□□□ -2.23
COL2A1P02458 RNU6-922P-201ENST00000516753 99 ntBASIC1.13□□□□□ -2.23
COL2A1P02458 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.13□□□□□ -2.23
COL2A1P02458 AL513423.1-201ENST00000621695 132 ntBASIC1.13□□□□□ -2.23
COL2A1P02458 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.13□□□□□ -2.23
COL2A1P02458 MIR2052-201ENST00000636055 55 ntBASIC1.13□□□□□ -2.23
COL2A1P02458 MIR424-201ENST00000362227 98 ntBASIC1.12□□□□□ -2.23
COL2A1P02458 SNORD115-2-201ENST00000362842 82 ntBASIC1.12□□□□□ -2.23
COL2A1P02458 Y_RNA.299-201ENST00000364973 94 ntBASIC1.12□□□□□ -2.23
COL2A1P02458 SNORD115-20-201ENST00000365099 82 ntBASIC1.12□□□□□ -2.23
COL2A1P02458 SNORD115-35-201ENST00000365122 82 ntBASIC1.12□□□□□ -2.23
COL2A1P02458 RNU6-1201P-201ENST00000384227 107 ntBASIC1.12□□□□□ -2.23
COL2A1P02458 MIR206-201ENST00000384872 86 ntBASIC1.12□□□□□ -2.23
COL2A1P02458 RNU6-402P-201ENST00000410678 103 ntBASIC1.12□□□□□ -2.23
COL2A1P02458 RNA5SP225-201ENST00000410874 135 ntBASIC1.12□□□□□ -2.23
COL2A1P02458 AC022137.1-201ENST00000483735 151 ntBASIC1.12□□□□□ -2.23
COL2A1P02458 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.12□□□□□ -2.23
COL2A1P02458 MIR4694-201ENST00000578534 80 ntBASIC1.12□□□□□ -2.23
COL2A1P02458 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.12□□□□□ -2.23
COL2A1P02458 MIR6841-201ENST00000637129 72 ntBASIC1.12□□□□□ -2.23
COL2A1P02458 MIR330-201ENST00000362196 94 ntBASIC1.12□□□□□ -2.23
COL2A1P02458 Y_RNA.448-201ENST00000384185 108 ntBASIC1.12□□□□□ -2.23
COL2A1P02458 RNU6-1067P-201ENST00000384752 107 ntBASIC1.12□□□□□ -2.23
COL2A1P02458 RNU6-1321P-201ENST00000390905 107 ntBASIC1.12□□□□□ -2.23
COL2A1P02458 AC004941.2-201ENST00000427009 228 ntBASIC1.12□□□□□ -2.23
COL2A1P02458 RNU7-73P-201ENST00000458743 63 ntBASIC1.12□□□□□ -2.23
COL2A1P02458 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.12□□□□□ -2.23
COL2A1P02458 RNU7-2P-201ENST00000516096 62 ntBASIC1.12□□□□□ -2.23
COL2A1P02458 MIR3192-201ENST00000584920 77 ntBASIC1.12□□□□□ -2.23
COL2A1P02458 AL773524.1-201ENST00000614065 229 ntBASIC1.12□□□□□ -2.23
COL2A1P02458 SEPT14P17-201ENST00000617978 177 ntBASIC1.12□□□□□ -2.23
COL2A1P02458 AC010487.4-201ENST00000637027 61 ntBASIC1.12□□□□□ -2.23
COL2A1P02458 Y_RNA.95-201ENST00000363079 95 ntBASIC1.11□□□□□ -2.23
COL2A1P02458 RNU6-1125P-201ENST00000363601 107 ntBASIC1.11□□□□□ -2.23
COL2A1P02458 RNU6-1163P-201ENST00000364516 107 ntBASIC1.11□□□□□ -2.23
COL2A1P02458 SNORA24-201ENST00000384096 131 ntBASIC1.11□□□□□ -2.23
COL2A1P02458 Y_RNA.537-201ENST00000384626 109 ntBASIC1.11□□□□□ -2.23
COL2A1P02458 MIR1255A-201ENST00000408338 113 ntBASIC1.11□□□□□ -2.23
COL2A1P02458 AC244023.1-201ENST00000426884 112 ntBASIC1.11□□□□□ -2.23
COL2A1P02458 SPINT5P-201ENST00000448174 155 ntBASIC1.11□□□□□ -2.23
COL2A1P02458 snoU13.16-201ENST00000459350 104 ntBASIC1.11□□□□□ -2.23
COL2A1P02458 RNA5SP481-201ENST00000516814 122 ntBASIC1.11□□□□□ -2.23
COL2A1P02458 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.11□□□□□ -2.23
COL2A1P02458 AC242498.1-201ENST00000604134 111 ntBASIC1.11□□□□□ -2.23
COL2A1P02458 PRELID3BP2-201ENST00000605362 201 ntBASIC1.11□□□□□ -2.23
COL2A1P02458 AC020891.4-201ENST00000605745 93 ntBASIC1.11□□□□□ -2.23
COL2A1P02458 AC103810.7-201ENST00000607821 91 ntBASIC1.11□□□□□ -2.23
COL2A1P02458 MIR8065-201ENST00000620577 100 ntBASIC1.11□□□□□ -2.23
COL2A1P02458 U1.36-201ENST00000620684 176 ntBASIC1.11□□□□□ -2.23
COL2A1P02458 MIR6513-201ENST00000621188 64 ntBASIC1.11□□□□□ -2.23
COL2A1P02458 MIR4251-201ENST00000635819 61 ntBASIC1.11□□□□□ -2.23
COL2A1P02458 MIR924-201ENST00000638017 53 ntBASIC1.11□□□□□ -2.23
COL2A1P02458 Y_RNA.313-201ENST00000365095 103 ntBASIC1.1□□□□□ -2.23
COL2A1P02458 RNU6-1124P-201ENST00000384169 107 ntBASIC1.1□□□□□ -2.23
COL2A1P02458 RNU6-360P-201ENST00000390944 104 ntBASIC1.1□□□□□ -2.23
COL2A1P02458 RPL39P39-201ENST00000455840 151 ntBASIC1.1□□□□□ -2.23
COL2A1P02458 AC036111.3-201ENST00000526389 112 ntBASIC1.1□□□□□ -2.23
COL2A1P02458 AC103810.9-201ENST00000606688 112 ntBASIC1.1□□□□□ -2.23
COL2A1P02458 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
COL2A1P02458 Y_RNA.10-201ENST00000362371 110 ntBASIC1.09□□□□□ -2.24
COL2A1P02458 RNU6-228P-201ENST00000362700 106 ntBASIC1.09□□□□□ -2.24
COL2A1P02458 SNORD114-23-201ENST00000363536 72 ntBASIC1.09□□□□□ -2.24
COL2A1P02458 SNORD45B-201ENST00000364617 72 ntBASIC1.09□□□□□ -2.24
COL2A1P02458 RNU6-820P-201ENST00000384273 107 ntBASIC1.09□□□□□ -2.24
COL2A1P02458 RNU6-205P-201ENST00000390858 107 ntBASIC1.09□□□□□ -2.24
COL2A1P02458 U8.15-201ENST00000390947 134 ntBASIC1.09□□□□□ -2.24
COL2A1P02458 JTBP1-201ENST00000441314 247 ntBASIC1.09□□□□□ -2.24
COL2A1P02458 MTND5P40-201ENST00000559945 246 ntBASIC1.09□□□□□ -2.24
COL2A1P02458 CYP3A52P-201ENST00000563326 91 ntBASIC1.09□□□□□ -2.24
COL2A1P02458 RNY1P13-201ENST00000365030 105 ntBASIC1.08□□□□□ -2.24
COL2A1P02458 SNORD58A-201ENST00000383875 65 ntBASIC1.08□□□□□ -2.24
COL2A1P02458 Y_RNA.430-201ENST00000384081 110 ntBASIC1.08□□□□□ -2.24
COL2A1P02458 SNORD38B-201ENST00000384690 67 ntBASIC1.08□□□□□ -2.24
COL2A1P02458 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.08□□□□□ -2.24
COL2A1P02458 RNA5SP95-201ENST00000410319 137 ntBASIC1.08□□□□□ -2.24
COL2A1P02458 RNA5SP261-201ENST00000410536 106 ntBASIC1.08□□□□□ -2.24
COL2A1P02458 Y_RNA.609-201ENST00000410669 89 ntBASIC1.08□□□□□ -2.24
COL2A1P02458 snoU13.25-201ENST00000458945 104 ntBASIC1.08□□□□□ -2.24
COL2A1P02458 RNU7-35P-201ENST00000517174 62 ntBASIC1.08□□□□□ -2.24
COL2A1P02458 SNORD38B-202ENST00000625943 69 ntBASIC1.08□□□□□ -2.24
COL2A1P02458 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.08□□□□□ -2.24
COL2A1P02458 MIR194-1-201ENST00000384892 85 ntBASIC1.07□□□□□ -2.24
COL2A1P02458 SNORD78.1-201ENST00000390866 65 ntBASIC1.07□□□□□ -2.24
COL2A1P02458 RNU6-887P-201ENST00000410660 100 ntBASIC1.07□□□□□ -2.24
COL2A1P02458 Y_RNA.611-201ENST00000410682 108 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms