Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
GFRA3O60609 RNA5SP383-201ENST00000362934 120 ntBASIC2.72□□□□□ -1.97
GFRA3O60609 RNU6-287P-201ENST00000516230 98 ntBASIC2.72□□□□□ -1.97
GFRA3O60609 MIR514B-201ENST00000516774 80 ntBASIC2.72□□□□□ -1.97
GFRA3O60609 MIR4709-201ENST00000577272 72 ntBASIC2.72□□□□□ -1.97
GFRA3O60609 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.72□□□□□ -1.97
GFRA3O60609 AC073476.4-201ENST00000628409 72 ntBASIC2.72□□□□□ -1.97
GFRA3O60609 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
GFRA3O60609 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.71□□□□□ -1.98
GFRA3O60609 RNU6-838P-201ENST00000363399 108 ntBASIC2.71□□□□□ -1.98
GFRA3O60609 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.71□□□□□ -1.98
GFRA3O60609 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC2.71□□□□□ -1.98
GFRA3O60609 RN7SL20P-201ENST00000488827 297 ntBASIC2.71□□□□□ -1.98
GFRA3O60609 MIR4264-201ENST00000583520 66 ntBASIC2.71□□□□□ -1.98
GFRA3O60609 XIST_intron.1-201ENST00000619444 68 ntBASIC2.71□□□□□ -1.98
GFRA3O60609 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.71□□□□□ -1.98
GFRA3O60609 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.71□□□□□ -1.98
GFRA3O60609 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.7□□□□□ -1.98
GFRA3O60609 SNORD56.3-201ENST00000363507 71 ntBASIC2.7□□□□□ -1.98
GFRA3O60609 Y_RNA.224-201ENST00000364308 111 ntBASIC2.7□□□□□ -1.98
GFRA3O60609 RNU1-36P-201ENST00000365130 165 ntBASIC2.7□□□□□ -1.98
GFRA3O60609 SNORD93-201ENST00000408813 74 ntBASIC2.7□□□□□ -1.98
GFRA3O60609 RNU6-994P-201ENST00000410507 111 ntBASIC2.7□□□□□ -1.98
GFRA3O60609 BX510359.4-201ENST00000423750 193 ntBASIC2.7□□□□□ -1.98
GFRA3O60609 RNU7-62P-201ENST00000458856 62 ntBASIC2.7□□□□□ -1.98
GFRA3O60609 SNORA40.17-201ENST00000517256 115 ntBASIC2.7□□□□□ -1.98
GFRA3O60609 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC2.7□□□□□ -1.98
GFRA3O60609 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.7□□□□□ -1.98
GFRA3O60609 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
GFRA3O60609 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
GFRA3O60609 MAPK10-322ENST00000641485 4530 ntBASIC2.69□□□□□ -1.98
GFRA3O60609 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
GFRA3O60609 RNU6-403P-201ENST00000363163 104 ntBASIC2.69□□□□□ -1.98
GFRA3O60609 RNU6-260P-201ENST00000384092 107 ntBASIC2.69□□□□□ -1.98
GFRA3O60609 MIR520A-201ENST00000384862 85 ntBASIC2.69□□□□□ -1.98
GFRA3O60609 MIR599-201ENST00000385069 95 ntBASIC2.69□□□□□ -1.98
GFRA3O60609 AL359511.1-201ENST00000402970 211 ntBASIC2.69□□□□□ -1.98
GFRA3O60609 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
GFRA3O60609 RPS27P29-201ENST00000463110 252 ntBASIC2.69□□□□□ -1.98
GFRA3O60609 Evf-2_5p.1-201ENST00000614213 142 ntBASIC2.69□□□□□ -1.98
GFRA3O60609 AL449363.1-201ENST00000617815 186 ntBASIC2.69□□□□□ -1.98
GFRA3O60609 RNU6-396P-201ENST00000365369 105 ntBASIC2.68□□□□□ -1.98
GFRA3O60609 snoU13.27-201ENST00000459278 104 ntBASIC2.68□□□□□ -1.98
GFRA3O60609 AC025033.1-201ENST00000463883 194 ntBASIC2.68□□□□□ -1.98
GFRA3O60609 RN7SL330P-201ENST00000469709 307 ntBASIC2.68□□□□□ -1.98
GFRA3O60609 RPL30P7-201ENST00000479312 323 ntBASIC2.68□□□□□ -1.98
GFRA3O60609 MIR1273D-201ENST00000577266 86 ntBASIC2.68□□□□□ -1.98
GFRA3O60609 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.68□□□□□ -1.98
GFRA3O60609 MAPK10-362ENST00000641864 4484 ntBASIC2.68□□□□□ -1.98
GFRA3O60609 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
GFRA3O60609 SCARNA20.6-201ENST00000517251 106 ntBASIC2.67□□□□□ -1.98
GFRA3O60609 MIR6739-201ENST00000622461 75 ntBASIC2.67□□□□□ -1.98
GFRA3O60609 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.67□□□□□ -1.98
GFRA3O60609 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
GFRA3O60609 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
GFRA3O60609 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
GFRA3O60609 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
GFRA3O60609 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
GFRA3O60609 RNA5SP295-201ENST00000362655 121 ntBASIC2.66□□□□□ -1.98
GFRA3O60609 RNA5SP48-201ENST00000363969 126 ntBASIC2.66□□□□□ -1.98
GFRA3O60609 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
GFRA3O60609 MIR499A-201ENST00000384903 122 ntBASIC2.66□□□□□ -1.98
GFRA3O60609 RNU7-119P-201ENST00000459279 63 ntBASIC2.66□□□□□ -1.98
GFRA3O60609 RNU1-143P-201ENST00000516296 146 ntBASIC2.66□□□□□ -1.98
GFRA3O60609 MIR548X-201ENST00000580069 75 ntBASIC2.66□□□□□ -1.98
GFRA3O60609 U1.23-201ENST00000610293 146 ntBASIC2.66□□□□□ -1.98
GFRA3O60609 AC022202.1-201ENST00000613515 211 ntBASIC2.66□□□□□ -1.98
GFRA3O60609 RNU1-68P-201ENST00000615382 146 ntBASIC2.66□□□□□ -1.98
GFRA3O60609 U1.39-201ENST00000621562 146 ntBASIC2.66□□□□□ -1.98
GFRA3O60609 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
GFRA3O60609 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.98
GFRA3O60609 AC092435.3-201ENST00000565538 3654 ntBASIC2.65□□□□□ -1.98
GFRA3O60609 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.65□□□□□ -1.98
GFRA3O60609 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
GFRA3O60609 MIR597-201ENST00000384968 97 ntBASIC2.65□□□□□ -1.99
GFRA3O60609 MIR653-201ENST00000385279 96 ntBASIC2.65□□□□□ -1.99
GFRA3O60609 RNA5SP217-201ENST00000515959 91 ntBASIC2.65□□□□□ -1.99
GFRA3O60609 RNVU1-2-201ENST00000516326 135 ntBASIC2.65□□□□□ -1.99
GFRA3O60609 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.65□□□□□ -1.99
GFRA3O60609 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.65□□□□□ -1.99
GFRA3O60609 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.65□□□□□ -1.99
GFRA3O60609 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
GFRA3O60609 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
GFRA3O60609 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
GFRA3O60609 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
GFRA3O60609 MIR148B-201ENST00000362252 99 ntBASIC2.64□□□□□ -1.99
GFRA3O60609 MIR591-201ENST00000385290 95 ntBASIC2.64□□□□□ -1.99
GFRA3O60609 MT-TN-201ENST00000387400 73 ntBASIC2.64□□□□□ -1.99
GFRA3O60609 snoU13.18-201ENST00000459483 104 ntBASIC2.64□□□□□ -1.99
GFRA3O60609 AC245166.1-201ENST00000521012 253 ntBASIC2.64□□□□□ -1.99
GFRA3O60609 MIR3186-201ENST00000577404 85 ntBASIC2.64□□□□□ -1.99
GFRA3O60609 MIR3192-201ENST00000584920 77 ntBASIC2.64□□□□□ -1.99
GFRA3O60609 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.63□□□□□ -1.99
GFRA3O60609 RNU6-112P-201ENST00000363599 104 ntBASIC2.63□□□□□ -1.99
GFRA3O60609 RNA5SP274-201ENST00000410484 108 ntBASIC2.63□□□□□ -1.99
GFRA3O60609 SNORA31.15-201ENST00000516771 132 ntBASIC2.63□□□□□ -1.99
GFRA3O60609 RNU6-711P-201ENST00000517255 106 ntBASIC2.63□□□□□ -1.99
GFRA3O60609 MIR6082-201ENST00000613604 109 ntBASIC2.63□□□□□ -1.99
GFRA3O60609 U4.4-201ENST00000620626 117 ntBASIC2.63□□□□□ -1.99
GFRA3O60609 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms