Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 RNU7-160P-201ENST00000516660 62 ntBASIC4.53□□□□□ -1.68
MSH5O43196 CYP3A54P-201ENST00000566950 75 ntBASIC4.53□□□□□ -1.68
MSH5O43196 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC4.53□□□□□ -1.68
MSH5O43196 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
MSH5O43196 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.52□□□□□ -1.69
MSH5O43196 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
MSH5O43196 MIR103A2-201ENST00000362154 78 ntBASIC4.52□□□□□ -1.69
MSH5O43196 Y_RNA.109-201ENST00000363215 102 ntBASIC4.52□□□□□ -1.69
MSH5O43196 RNU6-301P-201ENST00000384277 107 ntBASIC4.52□□□□□ -1.69
MSH5O43196 S100A11P2-201ENST00000467589 312 ntBASIC4.52□□□□□ -1.69
MSH5O43196 AC092185.1-201ENST00000491371 97 ntBASIC4.52□□□□□ -1.69
MSH5O43196 AP003716.2-201ENST00000528260 108 ntBASIC4.52□□□□□ -1.69
MSH5O43196 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
MSH5O43196 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
MSH5O43196 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC4.51□□□□□ -1.69
MSH5O43196 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC4.51□□□□□ -1.69
MSH5O43196 SNORD56.3-201ENST00000363507 71 ntBASIC4.51□□□□□ -1.69
MSH5O43196 SNORA80A-201ENST00000363922 136 ntBASIC4.51□□□□□ -1.69
MSH5O43196 RNA5SP380-201ENST00000517190 98 ntBASIC4.51□□□□□ -1.69
MSH5O43196 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
MSH5O43196 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC4.51□□□□□ -1.69
MSH5O43196 SNORA5B-201ENST00000363786 132 ntBASIC4.5□□□□□ -1.69
MSH5O43196 RNA5SP259-201ENST00000365541 109 ntBASIC4.5□□□□□ -1.69
MSH5O43196 RNU6-947P-201ENST00000516264 106 ntBASIC4.5□□□□□ -1.69
MSH5O43196 RNU4ATAC4P-201ENST00000516307 126 ntBASIC4.5□□□□□ -1.69
MSH5O43196 IGKV2-26-201ENST00000518305 343 ntBASIC4.5□□□□□ -1.69
MSH5O43196 MIR4460-201ENST00000577862 86 ntBASIC4.5□□□□□ -1.69
MSH5O43196 MIR4771-2-201ENST00000577758 74 ntBASIC4.49□□□□□ -1.69
MSH5O43196 MIR4771-1-201ENST00000582617 74 ntBASIC4.49□□□□□ -1.69
MSH5O43196 MAPK10-373ENST00000641983 6772 ntBASIC4.49□□□□□ -1.69
MSH5O43196 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.48□□□□□ -1.69
MSH5O43196 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
MSH5O43196 AC004965.1-201ENST00000413033 213 ntBASIC4.48□□□□□ -1.69
MSH5O43196 RNU6-934P-201ENST00000365154 107 ntBASIC4.47□□□□□ -1.69
MSH5O43196 AC006989.1-201ENST00000427212 131 ntBASIC4.47□□□□□ -1.69
MSH5O43196 RNU1-123P-201ENST00000458950 160 ntBASIC4.47□□□□□ -1.69
MSH5O43196 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC4.47□□□□□ -1.69
MSH5O43196 SNORA64.4-201ENST00000516632 81 ntBASIC4.47□□□□□ -1.69
MSH5O43196 RNA5SP309-201ENST00000516670 106 ntBASIC4.47□□□□□ -1.69
MSH5O43196 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
MSH5O43196 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
MSH5O43196 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.46□□□□□ -1.7
MSH5O43196 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC4.46□□□□□ -1.7
MSH5O43196 MIR758-201ENST00000390227 88 ntBASIC4.46□□□□□ -1.7
MSH5O43196 RNA5SP501-201ENST00000410990 112 ntBASIC4.46□□□□□ -1.7
MSH5O43196 AC003982.1-202ENST00000469928 248 ntBASIC4.46□□□□□ -1.7
MSH5O43196 RNU7-151P-201ENST00000516930 53 ntBASIC4.46□□□□□ -1.7
MSH5O43196 MIR4276-201ENST00000584832 70 ntBASIC4.46□□□□□ -1.7
MSH5O43196 MIR7106-201ENST00000612419 65 ntBASIC4.46□□□□□ -1.7
MSH5O43196 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
MSH5O43196 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
MSH5O43196 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
MSH5O43196 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
MSH5O43196 MIR422A-201ENST00000362286 90 ntBASIC4.45□□□□□ -1.7
MSH5O43196 SNORA63.6-201ENST00000364921 119 ntBASIC4.45□□□□□ -1.7
MSH5O43196 RNU6-945P-201ENST00000383947 107 ntBASIC4.45□□□□□ -1.7
MSH5O43196 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC4.45□□□□□ -1.7
MSH5O43196 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
MSH5O43196 RNA5SP126-201ENST00000365092 109 ntBASIC4.44□□□□□ -1.7
MSH5O43196 DEFA7P-201ENST00000382676 285 ntBASIC4.44□□□□□ -1.7
MSH5O43196 RNU1-143P-201ENST00000516296 146 ntBASIC4.44□□□□□ -1.7
MSH5O43196 MIR5004-201ENST00000579078 107 ntBASIC4.44□□□□□ -1.7
MSH5O43196 MIR548AG1-201ENST00000579932 66 ntBASIC4.44□□□□□ -1.7
MSH5O43196 U1.23-201ENST00000610293 146 ntBASIC4.44□□□□□ -1.7
MSH5O43196 RNU1-68P-201ENST00000615382 146 ntBASIC4.44□□□□□ -1.7
MSH5O43196 U1.39-201ENST00000621562 146 ntBASIC4.44□□□□□ -1.7
MSH5O43196 AP003355.3-201ENST00000623465 114 ntBASIC4.44□□□□□ -1.7
MSH5O43196 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
MSH5O43196 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
MSH5O43196 AL359851.1-201ENST00000569460 4997 ntBASIC4.43□□□□□ -1.7
MSH5O43196 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
MSH5O43196 HMGN1P18-201ENST00000457642 277 ntBASIC4.43□□□□□ -1.7
MSH5O43196 SCARNA20.6-201ENST00000517251 106 ntBASIC4.43□□□□□ -1.7
MSH5O43196 AC026333.2-201ENST00000542164 106 ntBASIC4.43□□□□□ -1.7
MSH5O43196 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
MSH5O43196 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
MSH5O43196 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC4.43□□□□□ -1.7
MSH5O43196 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
MSH5O43196 RNA5SP264-201ENST00000363115 107 ntBASIC4.42□□□□□ -1.7
MSH5O43196 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
MSH5O43196 AC104984.5-201ENST00000586878 94 ntBASIC4.42□□□□□ -1.7
MSH5O43196 AC090617.8-201ENST00000623339 167 ntBASIC4.42□□□□□ -1.7
MSH5O43196 AC067863.3-201ENST00000624172 122 ntBASIC4.42□□□□□ -1.7
MSH5O43196 U6.98-201ENST00000637157 84 ntBASIC4.42□□□□□ -1.7
MSH5O43196 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
MSH5O43196 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.42□□□□□ -1.7
MSH5O43196 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.41□□□□□ -1.7
MSH5O43196 MIR194-1-201ENST00000384892 85 ntBASIC4.41□□□□□ -1.7
MSH5O43196 RNA5SP465-201ENST00000391195 109 ntBASIC4.41□□□□□ -1.7
MSH5O43196 AL133373.1-201ENST00000497098 94 ntBASIC4.41□□□□□ -1.7
MSH5O43196 RNU5B-6P-201ENST00000516765 68 ntBASIC4.41□□□□□ -1.7
MSH5O43196 MIR3126-201ENST00000577443 74 ntBASIC4.41□□□□□ -1.7
MSH5O43196 IGKV1OR2-6-201ENST00000603485 277 ntBASIC4.41□□□□□ -1.7
MSH5O43196 MIR6715A-201ENST00000615929 79 ntBASIC4.41□□□□□ -1.7
MSH5O43196 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.41□□□□□ -1.7
MSH5O43196 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC4.41□□□□□ -1.7
MSH5O43196 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
MSH5O43196 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC4.4□□□□□ -1.7
MSH5O43196 U8.2-201ENST00000363156 134 ntBASIC4.4□□□□□ -1.71
MSH5O43196 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 185.6 ms