Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 MIR6132-201ENST00000622083 109 ntBASIC2.03□□□□□ -2.08
FOXD3Q9UJU5 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
FOXD3Q9UJU5 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.03□□□□□ -2.09
FOXD3Q9UJU5 SNORD114-1-201ENST00000362705 72 ntBASIC2.02□□□□□ -2.09
FOXD3Q9UJU5 RNY1P10-201ENST00000363268 113 ntBASIC2.02□□□□□ -2.09
FOXD3Q9UJU5 RNY1P1-201ENST00000364372 112 ntBASIC2.02□□□□□ -2.09
FOXD3Q9UJU5 AC245517.4-201ENST00000448601 281 ntBASIC2.02□□□□□ -2.09
FOXD3Q9UJU5 MIR18B-201ENST00000454574 71 ntBASIC2.02□□□□□ -2.09
FOXD3Q9UJU5 snoU13.23-201ENST00000458863 104 ntBASIC2.02□□□□□ -2.09
FOXD3Q9UJU5 RNU6-165P-201ENST00000517170 99 ntBASIC2.02□□□□□ -2.09
FOXD3Q9UJU5 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.02□□□□□ -2.09
FOXD3Q9UJU5 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
FOXD3Q9UJU5 AC008163.1-202ENST00000636004 2889 ntBASIC2.02□□□□□ -2.09
FOXD3Q9UJU5 RNA5SP173-201ENST00000364857 136 ntBASIC2.01□□□□□ -2.09
FOXD3Q9UJU5 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
FOXD3Q9UJU5 RNU1-78P-201ENST00000391248 165 ntBASIC2.01□□□□□ -2.09
FOXD3Q9UJU5 RNU6-1054P-201ENST00000411293 104 ntBASIC2.01□□□□□ -2.09
FOXD3Q9UJU5 AC079804.2-201ENST00000490376 200 ntBASIC2.01□□□□□ -2.09
FOXD3Q9UJU5 MIR219B-201ENST00000637023 88 ntBASIC2.01□□□□□ -2.09
FOXD3Q9UJU5 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
FOXD3Q9UJU5 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
FOXD3Q9UJU5 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2□□□□□ -2.09
FOXD3Q9UJU5 RNU1-98P-201ENST00000458992 160 ntBASIC2□□□□□ -2.09
FOXD3Q9UJU5 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2□□□□□ -2.09
FOXD3Q9UJU5 AC090897.1-201ENST00000580909 226 ntBASIC2□□□□□ -2.09
FOXD3Q9UJU5 U6.109-201ENST00000636749 87 ntBASIC2□□□□□ -2.09
FOXD3Q9UJU5 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
FOXD3Q9UJU5 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
FOXD3Q9UJU5 RNU6-654P-201ENST00000364373 107 ntBASIC1.99□□□□□ -2.09
FOXD3Q9UJU5 SNORA2B-201ENST00000384583 137 ntBASIC1.99□□□□□ -2.09
FOXD3Q9UJU5 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.99□□□□□ -2.09
FOXD3Q9UJU5 RNA5SP200-201ENST00000516360 103 ntBASIC1.99□□□□□ -2.09
FOXD3Q9UJU5 MIR4668-201ENST00000582284 70 ntBASIC1.99□□□□□ -2.09
FOXD3Q9UJU5 RNA5SP133-201ENST00000363368 119 ntBASIC1.98□□□□□ -2.09
FOXD3Q9UJU5 RNU6-219P-201ENST00000364728 107 ntBASIC1.98□□□□□ -2.09
FOXD3Q9UJU5 RNU6-571P-201ENST00000384128 107 ntBASIC1.98□□□□□ -2.09
FOXD3Q9UJU5 RNU6-402P-201ENST00000410678 103 ntBASIC1.98□□□□□ -2.09
FOXD3Q9UJU5 Y_RNA.620-201ENST00000411009 88 ntBASIC1.98□□□□□ -2.09
FOXD3Q9UJU5 SNRPGP12-201ENST00000449481 213 ntBASIC1.98□□□□□ -2.09
FOXD3Q9UJU5 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
FOXD3Q9UJU5 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
FOXD3Q9UJU5 Y_RNA.119-201ENST00000363301 96 ntBASIC1.97□□□□□ -2.09
FOXD3Q9UJU5 MIR221-201ENST00000385135 110 ntBASIC1.97□□□□□ -2.09
FOXD3Q9UJU5 SNORA48.3-201ENST00000391081 134 ntBASIC1.97□□□□□ -2.09
FOXD3Q9UJU5 HMGN2P38-201ENST00000423806 265 ntBASIC1.97□□□□□ -2.09
FOXD3Q9UJU5 AC090255.1-201ENST00000495779 349 ntBASIC1.97□□□□□ -2.09
FOXD3Q9UJU5 AP003327.1-201ENST00000529684 127 ntBASIC1.97□□□□□ -2.09
FOXD3Q9UJU5 MIR4500-201ENST00000579472 76 ntBASIC1.97□□□□□ -2.09
FOXD3Q9UJU5 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.97□□□□□ -2.09
FOXD3Q9UJU5 Y_RNA.219-201ENST00000364232 113 ntBASIC1.96□□□□□ -2.1
FOXD3Q9UJU5 RNU6-53P-201ENST00000365367 106 ntBASIC1.96□□□□□ -2.1
FOXD3Q9UJU5 MIR181B2-201ENST00000385004 89 ntBASIC1.96□□□□□ -2.1
FOXD3Q9UJU5 MIR676-201ENST00000390702 67 ntBASIC1.96□□□□□ -2.1
FOXD3Q9UJU5 RNU6-482P-201ENST00000391068 107 ntBASIC1.96□□□□□ -2.1
FOXD3Q9UJU5 MIR934-201ENST00000401241 83 ntBASIC1.96□□□□□ -2.1
FOXD3Q9UJU5 RNA5SP489-201ENST00000410986 109 ntBASIC1.96□□□□□ -2.1
FOXD3Q9UJU5 AC022137.1-201ENST00000483735 151 ntBASIC1.96□□□□□ -2.1
FOXD3Q9UJU5 AC108210.2-201ENST00000503681 201 ntBASIC1.96□□□□□ -2.1
FOXD3Q9UJU5 AL513043.2-201ENST00000573941 143 ntBASIC1.96□□□□□ -2.1
FOXD3Q9UJU5 uc_338.6-201ENST00000613544 171 ntBASIC1.96□□□□□ -2.1
FOXD3Q9UJU5 ZNF355P-201ENST00000427301 3216 ntBASIC1.96□□□□□ -2.1
FOXD3Q9UJU5 RNU6-242P-201ENST00000384359 107 ntBASIC1.95□□□□□ -2.1
FOXD3Q9UJU5 RNU6-592P-201ENST00000411333 103 ntBASIC1.95□□□□□ -2.1
FOXD3Q9UJU5 RPS27P16-201ENST00000425758 201 ntBASIC1.95□□□□□ -2.1
FOXD3Q9UJU5 AL161932.1-201ENST00000437408 146 ntBASIC1.95□□□□□ -2.1
FOXD3Q9UJU5 RN7SKP88-201ENST00000516847 250 ntBASIC1.95□□□□□ -2.1
FOXD3Q9UJU5 7SK.8-201ENST00000612110 250 ntBASIC1.95□□□□□ -2.1
FOXD3Q9UJU5 7SK.11-201ENST00000615477 250 ntBASIC1.95□□□□□ -2.1
FOXD3Q9UJU5 MIR8066-201ENST00000617280 78 ntBASIC1.95□□□□□ -2.1
FOXD3Q9UJU5 7SK.13-201ENST00000622040 250 ntBASIC1.95□□□□□ -2.1
FOXD3Q9UJU5 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.94□□□□□ -2.1
FOXD3Q9UJU5 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
FOXD3Q9UJU5 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.94□□□□□ -2.1
FOXD3Q9UJU5 RNA5SP37-201ENST00000365420 130 ntBASIC1.94□□□□□ -2.1
FOXD3Q9UJU5 RNA5SP95-201ENST00000410319 137 ntBASIC1.94□□□□□ -2.1
FOXD3Q9UJU5 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
FOXD3Q9UJU5 AC015712.3-201ENST00000559380 164 ntBASIC1.94□□□□□ -2.1
FOXD3Q9UJU5 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.94□□□□□ -2.1
FOXD3Q9UJU5 RNU4-52P-201ENST00000384209 138 ntBASIC1.93□□□□□ -2.1
FOXD3Q9UJU5 RNY1P4-201ENST00000384595 115 ntBASIC1.93□□□□□ -2.1
FOXD3Q9UJU5 AL591806.2-201ENST00000433122 173 ntBASIC1.93□□□□□ -2.1
FOXD3Q9UJU5 AC104435.1-201ENST00000483483 166 ntBASIC1.93□□□□□ -2.1
FOXD3Q9UJU5 RNU6-902P-201ENST00000517212 91 ntBASIC1.93□□□□□ -2.1
FOXD3Q9UJU5 MIR1245B-201ENST00000636115 69 ntBASIC1.93□□□□□ -2.1
FOXD3Q9UJU5 MIRLET7G-201ENST00000362280 84 ntBASIC1.92□□□□□ -2.1
FOXD3Q9UJU5 Y_RNA.57-201ENST00000362806 113 ntBASIC1.92□□□□□ -2.1
FOXD3Q9UJU5 RNU4-58P-201ENST00000363192 141 ntBASIC1.92□□□□□ -2.1
FOXD3Q9UJU5 SNORD113.3-201ENST00000364630 78 ntBASIC1.92□□□□□ -2.1
FOXD3Q9UJU5 RNU1-36P-201ENST00000365130 165 ntBASIC1.92□□□□□ -2.1
FOXD3Q9UJU5 RNU6-573P-201ENST00000383938 106 ntBASIC1.92□□□□□ -2.1
FOXD3Q9UJU5 SNORD93-201ENST00000408813 74 ntBASIC1.92□□□□□ -2.1
FOXD3Q9UJU5 Y_RNA.609-201ENST00000410669 89 ntBASIC1.92□□□□□ -2.1
FOXD3Q9UJU5 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.92□□□□□ -2.1
FOXD3Q9UJU5 RNU6-1194P-201ENST00000516208 104 ntBASIC1.92□□□□□ -2.1
FOXD3Q9UJU5 RNU6-850P-201ENST00000516934 103 ntBASIC1.92□□□□□ -2.1
FOXD3Q9UJU5 MIR4491-201ENST00000581087 68 ntBASIC1.92□□□□□ -2.1
FOXD3Q9UJU5 AL161722.3-201ENST00000605789 2983 ntBASIC1.92□□□□□ -2.1
FOXD3Q9UJU5 AC025521.1-201ENST00000621624 286 ntBASIC1.92□□□□□ -2.1
FOXD3Q9UJU5 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.92□□□□□ -2.1
FOXD3Q9UJU5 AP000553.5-201ENST00000641933 54 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 236.3 ms