Protein–RNA interactions for Protein: Q9NY35

CLDND1, Claudin domain-containing protein 1, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1Q9NY35 MIR4264-201ENST00000583520 66 ntBASIC1.73□□□□□ -2.13
CLDND1Q9NY35 AL662814.1-201ENST00000617364 121 ntBASIC1.73□□□□□ -2.13
CLDND1Q9NY35 MIR6516-201ENST00000630554 81 ntBASIC1.73□□□□□ -2.13
CLDND1Q9NY35 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
CLDND1Q9NY35 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.73□□□□□ -2.13
CLDND1Q9NY35 RNU6-832P-201ENST00000363319 107 ntBASIC1.72□□□□□ -2.13
CLDND1Q9NY35 RNU4-36P-201ENST00000364294 144 ntBASIC1.72□□□□□ -2.13
CLDND1Q9NY35 RNY1P13-201ENST00000365030 105 ntBASIC1.72□□□□□ -2.13
CLDND1Q9NY35 RNU6-905P-201ENST00000384434 107 ntBASIC1.72□□□□□ -2.13
CLDND1Q9NY35 MIR588-201ENST00000384900 83 ntBASIC1.72□□□□□ -2.13
CLDND1Q9NY35 SNORA67.6-201ENST00000391093 99 ntBASIC1.72□□□□□ -2.13
CLDND1Q9NY35 RNA5SP237-201ENST00000410414 113 ntBASIC1.72□□□□□ -2.13
CLDND1Q9NY35 Y_RNA.694-201ENST00000516677 117 ntBASIC1.72□□□□□ -2.13
CLDND1Q9NY35 RNU7-137P-201ENST00000516788 62 ntBASIC1.72□□□□□ -2.13
CLDND1Q9NY35 MIR4448-201ENST00000584360 86 ntBASIC1.72□□□□□ -2.13
CLDND1Q9NY35 AP000753.3-201ENST00000604083 169 ntBASIC1.72□□□□□ -2.13
CLDND1Q9NY35 RMST_2.1-201ENST00000617263 136 ntBASIC1.72□□□□□ -2.13
CLDND1Q9NY35 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CLDND1Q9NY35 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
CLDND1Q9NY35 SNORD114-10-201ENST00000363409 72 ntBASIC1.71□□□□□ -2.14
CLDND1Q9NY35 RNU6-640P-201ENST00000363693 105 ntBASIC1.71□□□□□ -2.14
CLDND1Q9NY35 RNU6-1201P-201ENST00000384227 107 ntBASIC1.71□□□□□ -2.14
CLDND1Q9NY35 MIR563-201ENST00000385080 79 ntBASIC1.71□□□□□ -2.14
CLDND1Q9NY35 RNU6-1307P-201ENST00000391012 103 ntBASIC1.71□□□□□ -2.14
CLDND1Q9NY35 RNU1-123P-201ENST00000458950 160 ntBASIC1.71□□□□□ -2.14
CLDND1Q9NY35 RNA5SP102-201ENST00000516865 106 ntBASIC1.71□□□□□ -2.14
CLDND1Q9NY35 AC024614.2-201ENST00000577584 372 ntBASIC1.71□□□□□ -2.14
CLDND1Q9NY35 MIR6740-201ENST00000618268 113 ntBASIC1.71□□□□□ -2.14
CLDND1Q9NY35 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.71□□□□□ -2.14
CLDND1Q9NY35 RNU6-1313P-201ENST00000362622 102 ntBASIC1.7□□□□□ -2.14
CLDND1Q9NY35 Y_RNA.377-201ENST00000365644 108 ntBASIC1.7□□□□□ -2.14
CLDND1Q9NY35 MIR934-201ENST00000401241 83 ntBASIC1.7□□□□□ -2.14
CLDND1Q9NY35 RNU6-613P-201ENST00000410412 108 ntBASIC1.7□□□□□ -2.14
CLDND1Q9NY35 MIR4421-201ENST00000578133 69 ntBASIC1.7□□□□□ -2.14
CLDND1Q9NY35 uc_338.20-201ENST00000621563 178 ntBASIC1.7□□□□□ -2.14
CLDND1Q9NY35 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.7□□□□□ -2.14
CLDND1Q9NY35 ZNF209P-201ENST00000593450 2304 ntBASIC1.69□□□□□ -2.14
CLDND1Q9NY35 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.69□□□□□ -2.14
CLDND1Q9NY35 MIR377-201ENST00000362145 69 ntBASIC1.69□□□□□ -2.14
CLDND1Q9NY35 RNU6-205P-201ENST00000390858 107 ntBASIC1.69□□□□□ -2.14
CLDND1Q9NY35 Y_RNA.601-201ENST00000410500 113 ntBASIC1.69□□□□□ -2.14
CLDND1Q9NY35 RNU6-1054P-201ENST00000411293 104 ntBASIC1.69□□□□□ -2.14
CLDND1Q9NY35 SNORA40.13-201ENST00000516379 120 ntBASIC1.69□□□□□ -2.14
CLDND1Q9NY35 RNU6-158P-201ENST00000517104 100 ntBASIC1.69□□□□□ -2.14
CLDND1Q9NY35 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.69□□□□□ -2.14
CLDND1Q9NY35 Y_RNA.10-201ENST00000362371 110 ntBASIC1.68□□□□□ -2.14
CLDND1Q9NY35 Y_RNA.43-201ENST00000362670 111 ntBASIC1.68□□□□□ -2.14
CLDND1Q9NY35 RNU6-654P-201ENST00000364373 107 ntBASIC1.68□□□□□ -2.14
CLDND1Q9NY35 Y_RNA.448-201ENST00000384185 108 ntBASIC1.68□□□□□ -2.14
CLDND1Q9NY35 SCARNA23-201ENST00000516060 130 ntBASIC1.68□□□□□ -2.14
CLDND1Q9NY35 RNU6-902P-201ENST00000517212 91 ntBASIC1.68□□□□□ -2.14
CLDND1Q9NY35 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.68□□□□□ -2.14
CLDND1Q9NY35 AC105081.1-201ENST00000617727 106 ntBASIC1.68□□□□□ -2.14
CLDND1Q9NY35 AL512310.12-203ENST00000640543 90 ntBASIC1.68□□□□□ -2.14
CLDND1Q9NY35 Y_RNA.93-201ENST00000363066 109 ntBASIC1.67□□□□□ -2.14
CLDND1Q9NY35 RNU6-949P-201ENST00000384040 107 ntBASIC1.67□□□□□ -2.14
CLDND1Q9NY35 RNU6-1321P-201ENST00000390905 107 ntBASIC1.67□□□□□ -2.14
CLDND1Q9NY35 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.67□□□□□ -2.14
CLDND1Q9NY35 RNU7-62P-201ENST00000458856 62 ntBASIC1.67□□□□□ -2.14
CLDND1Q9NY35 UBL5P1-201ENST00000507979 193 ntBASIC1.67□□□□□ -2.14
CLDND1Q9NY35 RN7SKP88-201ENST00000516847 250 ntBASIC1.67□□□□□ -2.14
CLDND1Q9NY35 7SK.8-201ENST00000612110 250 ntBASIC1.67□□□□□ -2.14
CLDND1Q9NY35 AL442128.1-201ENST00000615151 90 ntBASIC1.67□□□□□ -2.14
CLDND1Q9NY35 7SK.11-201ENST00000615477 250 ntBASIC1.67□□□□□ -2.14
CLDND1Q9NY35 7SK.13-201ENST00000622040 250 ntBASIC1.67□□□□□ -2.14
CLDND1Q9NY35 MIR30D-201ENST00000362283 70 ntBASIC1.66□□□□□ -2.14
CLDND1Q9NY35 SNORD114-22-201ENST00000365423 72 ntBASIC1.66□□□□□ -2.14
CLDND1Q9NY35 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.66□□□□□ -2.14
CLDND1Q9NY35 RNU6-1165P-201ENST00000410119 107 ntBASIC1.66□□□□□ -2.14
CLDND1Q9NY35 RNU6-447P-201ENST00000410293 104 ntBASIC1.66□□□□□ -2.14
CLDND1Q9NY35 RNA5SP95-201ENST00000410319 137 ntBASIC1.66□□□□□ -2.14
CLDND1Q9NY35 RNU6-1118P-201ENST00000410382 104 ntBASIC1.66□□□□□ -2.14
CLDND1Q9NY35 RNU6-1076P-201ENST00000410397 104 ntBASIC1.66□□□□□ -2.14
CLDND1Q9NY35 RNU6-355P-201ENST00000410427 104 ntBASIC1.66□□□□□ -2.14
CLDND1Q9NY35 RNU6-791P-201ENST00000410467 104 ntBASIC1.66□□□□□ -2.14
CLDND1Q9NY35 RNU6-705P-201ENST00000410601 104 ntBASIC1.66□□□□□ -2.14
CLDND1Q9NY35 RNU6-1100P-201ENST00000410691 104 ntBASIC1.66□□□□□ -2.14
CLDND1Q9NY35 RNU6-860P-201ENST00000410860 104 ntBASIC1.66□□□□□ -2.14
CLDND1Q9NY35 RNU6-1217P-201ENST00000411276 104 ntBASIC1.66□□□□□ -2.14
CLDND1Q9NY35 RNU6-785P-201ENST00000411324 104 ntBASIC1.66□□□□□ -2.14
CLDND1Q9NY35 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.66□□□□□ -2.14
CLDND1Q9NY35 MTATP8P2-201ENST00000435212 202 ntBASIC1.66□□□□□ -2.14
CLDND1Q9NY35 AC048334.1-201ENST00000477975 159 ntBASIC1.66□□□□□ -2.14
CLDND1Q9NY35 U6.90-201ENST00000614007 104 ntBASIC1.66□□□□□ -2.14
CLDND1Q9NY35 U6.70-201ENST00000620287 104 ntBASIC1.66□□□□□ -2.14
CLDND1Q9NY35 RNU6-1255P-201ENST00000363434 112 ntBASIC1.65□□□□□ -2.15
CLDND1Q9NY35 RNU6-580P-201ENST00000365159 107 ntBASIC1.65□□□□□ -2.15
CLDND1Q9NY35 MIR34C-201ENST00000384831 77 ntBASIC1.65□□□□□ -2.15
CLDND1Q9NY35 MIR517C-201ENST00000385103 95 ntBASIC1.65□□□□□ -2.15
CLDND1Q9NY35 MIR1323-201ENST00000408090 73 ntBASIC1.65□□□□□ -2.15
CLDND1Q9NY35 RNU2-40P-201ENST00000410833 196 ntBASIC1.65□□□□□ -2.15
CLDND1Q9NY35 RNU6-1006P-201ENST00000516998 103 ntBASIC1.65□□□□□ -2.15
CLDND1Q9NY35 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.65□□□□□ -2.15
CLDND1Q9NY35 uc_338.6-201ENST00000613544 171 ntBASIC1.65□□□□□ -2.15
CLDND1Q9NY35 Y_RNA.107-201ENST00000363190 121 ntBASIC1.64□□□□□ -2.15
CLDND1Q9NY35 RNU6-865P-201ENST00000364772 107 ntBASIC1.64□□□□□ -2.15
CLDND1Q9NY35 RNU7-48P-201ENST00000458875 63 ntBASIC1.64□□□□□ -2.15
CLDND1Q9NY35 SNORA31.2-201ENST00000516019 134 ntBASIC1.64□□□□□ -2.15
CLDND1Q9NY35 RNU6-970P-201ENST00000516312 107 ntBASIC1.64□□□□□ -2.15
CLDND1Q9NY35 SNORA31.24-201ENST00000517232 57 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 201.3 ms