Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 RNU6-228P-201ENST00000362700 106 ntBASIC1.68□□□□□ -2.14
SEC61A2Q9H9S3 RNU6-1276P-201ENST00000365372 104 ntBASIC1.68□□□□□ -2.14
SEC61A2Q9H9S3 SNORD38.2-201ENST00000384470 69 ntBASIC1.68□□□□□ -2.14
SEC61A2Q9H9S3 RNA5SP225-201ENST00000410874 135 ntBASIC1.68□□□□□ -2.14
SEC61A2Q9H9S3 AC005908.1-201ENST00000468701 347 ntBASIC1.68□□□□□ -2.14
SEC61A2Q9H9S3 MIR3122-201ENST00000577243 73 ntBASIC1.68□□□□□ -2.14
SEC61A2Q9H9S3 MIR4299-201ENST00000577899 72 ntBASIC1.68□□□□□ -2.14
SEC61A2Q9H9S3 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.68□□□□□ -2.14
SEC61A2Q9H9S3 AL357312.1-201ENST00000603879 298 ntBASIC1.68□□□□□ -2.14
SEC61A2Q9H9S3 AC020891.4-201ENST00000605745 93 ntBASIC1.68□□□□□ -2.14
SEC61A2Q9H9S3 AL161722.3-201ENST00000605789 2983 ntBASIC1.68□□□□□ -2.14
SEC61A2Q9H9S3 GHRLOS.1-201ENST00000610995 70 ntBASIC1.68□□□□□ -2.14
SEC61A2Q9H9S3 MIR8074-201ENST00000615081 81 ntBASIC1.68□□□□□ -2.14
SEC61A2Q9H9S3 MIR6740-201ENST00000618268 113 ntBASIC1.68□□□□□ -2.14
SEC61A2Q9H9S3 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.68□□□□□ -2.14
SEC61A2Q9H9S3 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.68□□□□□ -2.14
SEC61A2Q9H9S3 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SEC61A2Q9H9S3 RNU6-396P-201ENST00000365369 105 ntBASIC1.67□□□□□ -2.14
SEC61A2Q9H9S3 RNU6-949P-201ENST00000384040 107 ntBASIC1.67□□□□□ -2.14
SEC61A2Q9H9S3 MIR181B2-201ENST00000385004 89 ntBASIC1.67□□□□□ -2.14
SEC61A2Q9H9S3 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.67□□□□□ -2.14
SEC61A2Q9H9S3 MIR764-201ENST00000390811 85 ntBASIC1.67□□□□□ -2.14
SEC61A2Q9H9S3 Y_RNA.620-201ENST00000411009 88 ntBASIC1.67□□□□□ -2.14
SEC61A2Q9H9S3 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.67□□□□□ -2.14
SEC61A2Q9H9S3 AC019176.1-201ENST00000518519 225 ntBASIC1.67□□□□□ -2.14
SEC61A2Q9H9S3 MIR4713-201ENST00000582691 75 ntBASIC1.67□□□□□ -2.14
SEC61A2Q9H9S3 MIR6715A-201ENST00000615929 79 ntBASIC1.67□□□□□ -2.14
SEC61A2Q9H9S3 MIR1255A-201ENST00000408338 113 ntBASIC1.66□□□□□ -2.14
SEC61A2Q9H9S3 Y_RNA.611-201ENST00000410682 108 ntBASIC1.66□□□□□ -2.14
SEC61A2Q9H9S3 HMGN2P19-201ENST00000425149 265 ntBASIC1.66□□□□□ -2.14
SEC61A2Q9H9S3 AC090897.1-201ENST00000580909 226 ntBASIC1.66□□□□□ -2.14
SEC61A2Q9H9S3 MIR5588-201ENST00000581890 63 ntBASIC1.66□□□□□ -2.14
SEC61A2Q9H9S3 MIR6845-201ENST00000613182 61 ntBASIC1.66□□□□□ -2.14
SEC61A2Q9H9S3 AC025521.1-201ENST00000621624 286 ntBASIC1.66□□□□□ -2.14
SEC61A2Q9H9S3 Y_RNA.173-201ENST00000363776 113 ntBASIC1.65□□□□□ -2.15
SEC61A2Q9H9S3 SNORA16.1-201ENST00000364597 132 ntBASIC1.65□□□□□ -2.15
SEC61A2Q9H9S3 U8.13-201ENST00000390842 128 ntBASIC1.65□□□□□ -2.15
SEC61A2Q9H9S3 RNA5SP95-201ENST00000410319 137 ntBASIC1.65□□□□□ -2.15
SEC61A2Q9H9S3 Y_RNA.685-201ENST00000516532 108 ntBASIC1.65□□□□□ -2.15
SEC61A2Q9H9S3 RNU6-638P-201ENST00000516582 104 ntBASIC1.65□□□□□ -2.15
SEC61A2Q9H9S3 AL513043.2-201ENST00000573941 143 ntBASIC1.65□□□□□ -2.15
SEC61A2Q9H9S3 MIR4500-201ENST00000579472 76 ntBASIC1.65□□□□□ -2.15
SEC61A2Q9H9S3 U6.109-201ENST00000636749 87 ntBASIC1.65□□□□□ -2.15
SEC61A2Q9H9S3 ZNF355P-201ENST00000427301 3216 ntBASIC1.65□□□□□ -2.15
SEC61A2Q9H9S3 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
SEC61A2Q9H9S3 RNU6-979P-201ENST00000383896 107 ntBASIC1.64□□□□□ -2.15
SEC61A2Q9H9S3 SNORA2B-201ENST00000384583 137 ntBASIC1.64□□□□□ -2.15
SEC61A2Q9H9S3 SNORA40.18-201ENST00000391200 128 ntBASIC1.64□□□□□ -2.15
SEC61A2Q9H9S3 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.64□□□□□ -2.15
SEC61A2Q9H9S3 RNU7-62P-201ENST00000458856 62 ntBASIC1.64□□□□□ -2.15
SEC61A2Q9H9S3 RPS29P11-201ENST00000496507 171 ntBASIC1.64□□□□□ -2.15
SEC61A2Q9H9S3 RNU6-250P-201ENST00000516958 103 ntBASIC1.64□□□□□ -2.15
SEC61A2Q9H9S3 AP000753.3-201ENST00000604083 169 ntBASIC1.64□□□□□ -2.15
SEC61A2Q9H9S3 uc_338.6-201ENST00000613544 171 ntBASIC1.64□□□□□ -2.15
SEC61A2Q9H9S3 MIR6516-201ENST00000630554 81 ntBASIC1.64□□□□□ -2.15
SEC61A2Q9H9S3 Y_RNA.4-201ENST00000362333 112 ntBASIC1.63□□□□□ -2.15
SEC61A2Q9H9S3 RNU6-654P-201ENST00000364373 107 ntBASIC1.63□□□□□ -2.15
SEC61A2Q9H9S3 Y_RNA.437-201ENST00000384113 113 ntBASIC1.63□□□□□ -2.15
SEC61A2Q9H9S3 MIR9-3-201ENST00000385084 90 ntBASIC1.63□□□□□ -2.15
SEC61A2Q9H9S3 MIR676-201ENST00000390702 67 ntBASIC1.63□□□□□ -2.15
SEC61A2Q9H9S3 RNU6-613P-201ENST00000410412 108 ntBASIC1.63□□□□□ -2.15
SEC61A2Q9H9S3 HMGN2P23-201ENST00000456759 269 ntBASIC1.63□□□□□ -2.15
SEC61A2Q9H9S3 AC138749.4-201ENST00000563970 127 ntBASIC1.63□□□□□ -2.15
SEC61A2Q9H9S3 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
SEC61A2Q9H9S3 MIR103A2-201ENST00000362154 78 ntBASIC1.62□□□□□ -2.15
SEC61A2Q9H9S3 MIR30D-201ENST00000362283 70 ntBASIC1.62□□□□□ -2.15
SEC61A2Q9H9S3 RNA5SP133-201ENST00000363368 119 ntBASIC1.62□□□□□ -2.15
SEC61A2Q9H9S3 RNY1P2-201ENST00000364820 117 ntBASIC1.62□□□□□ -2.15
SEC61A2Q9H9S3 RNU6-787P-201ENST00000384032 107 ntBASIC1.62□□□□□ -2.15
SEC61A2Q9H9S3 MIR583-201ENST00000384846 75 ntBASIC1.62□□□□□ -2.15
SEC61A2Q9H9S3 MIR1185-1-201ENST00000408598 86 ntBASIC1.62□□□□□ -2.15
SEC61A2Q9H9S3 RNU6-1165P-201ENST00000410119 107 ntBASIC1.62□□□□□ -2.15
SEC61A2Q9H9S3 AC245517.4-201ENST00000448601 281 ntBASIC1.62□□□□□ -2.15
SEC61A2Q9H9S3 snoU13.9-201ENST00000458927 103 ntBASIC1.62□□□□□ -2.15
SEC61A2Q9H9S3 RPL23AP42-201ENST00000471152 471 ntBASIC1.62□□□□□ -2.15
SEC61A2Q9H9S3 MIR2115-201ENST00000516657 100 ntBASIC1.62□□□□□ -2.15
SEC61A2Q9H9S3 RNU6-295P-201ENST00000516901 104 ntBASIC1.62□□□□□ -2.15
SEC61A2Q9H9S3 MIR4419B-201ENST00000577260 68 ntBASIC1.62□□□□□ -2.15
SEC61A2Q9H9S3 MIR4264-201ENST00000583520 66 ntBASIC1.62□□□□□ -2.15
SEC61A2Q9H9S3 SNORA4-201ENST00000584302 138 ntBASIC1.62□□□□□ -2.15
SEC61A2Q9H9S3 AC103810.8-201ENST00000607347 118 ntBASIC1.62□□□□□ -2.15
SEC61A2Q9H9S3 MIR7843-201ENST00000622274 79 ntBASIC1.62□□□□□ -2.15
SEC61A2Q9H9S3 MIR548BB-201ENST00000626714 66 ntBASIC1.62□□□□□ -2.15
SEC61A2Q9H9S3 MIR3202-2-201ENST00000635980 79 ntBASIC1.62□□□□□ -2.15
SEC61A2Q9H9S3 RNU6-509P-201ENST00000363519 107 ntBASIC1.61□□□□□ -2.15
SEC61A2Q9H9S3 RNU6-1125P-201ENST00000363601 107 ntBASIC1.61□□□□□ -2.15
SEC61A2Q9H9S3 Y_RNA.313-201ENST00000365095 103 ntBASIC1.61□□□□□ -2.15
SEC61A2Q9H9S3 RNU6-480P-201ENST00000384332 107 ntBASIC1.61□□□□□ -2.15
SEC61A2Q9H9S3 MIR563-201ENST00000385080 79 ntBASIC1.61□□□□□ -2.15
SEC61A2Q9H9S3 RNU4-83P-201ENST00000410863 133 ntBASIC1.61□□□□□ -2.15
SEC61A2Q9H9S3 BX276092.1-201ENST00000427368 251 ntBASIC1.61□□□□□ -2.15
SEC61A2Q9H9S3 AL133373.1-201ENST00000497098 94 ntBASIC1.61□□□□□ -2.15
SEC61A2Q9H9S3 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.61□□□□□ -2.15
SEC61A2Q9H9S3 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
SEC61A2Q9H9S3 Y_RNA.119-201ENST00000363301 96 ntBASIC1.6□□□□□ -2.15
SEC61A2Q9H9S3 Y_RNA.168-201ENST00000363740 102 ntBASIC1.6□□□□□ -2.15
SEC61A2Q9H9S3 SNORD115-27-201ENST00000364430 82 ntBASIC1.6□□□□□ -2.15
SEC61A2Q9H9S3 SNORD1A-201ENST00000364968 72 ntBASIC1.6□□□□□ -2.15
SEC61A2Q9H9S3 MIR504-201ENST00000385065 83 ntBASIC1.6□□□□□ -2.15
SEC61A2Q9H9S3 AL591806.2-201ENST00000433122 173 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 174 ms