Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 SNORD116-10-201ENST00000363791 102 ntBASIC1.88□□□□□ -2.11
RNF38Q9H0F5 SNORD1A-201ENST00000364968 72 ntBASIC1.88□□□□□ -2.11
RNF38Q9H0F5 RNY1P13-201ENST00000365030 105 ntBASIC1.88□□□□□ -2.11
RNF38Q9H0F5 RNU6-242P-201ENST00000384359 107 ntBASIC1.88□□□□□ -2.11
RNF38Q9H0F5 MIR934-201ENST00000401241 83 ntBASIC1.88□□□□□ -2.11
RNF38Q9H0F5 MIR548G-201ENST00000408442 89 ntBASIC1.88□□□□□ -2.11
RNF38Q9H0F5 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.88□□□□□ -2.11
RNF38Q9H0F5 RNU7-48P-201ENST00000458875 63 ntBASIC1.88□□□□□ -2.11
RNF38Q9H0F5 RNU6-638P-201ENST00000516582 104 ntBASIC1.88□□□□□ -2.11
RNF38Q9H0F5 AC141846.1-201ENST00000568348 142 ntBASIC1.88□□□□□ -2.11
RNF38Q9H0F5 MIR4668-201ENST00000582284 70 ntBASIC1.88□□□□□ -2.11
RNF38Q9H0F5 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.88□□□□□ -2.11
RNF38Q9H0F5 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
RNF38Q9H0F5 MIR302D-201ENST00000362275 68 ntBASIC1.87□□□□□ -2.11
RNF38Q9H0F5 RNA5SP48-201ENST00000363969 126 ntBASIC1.87□□□□□ -2.11
RNF38Q9H0F5 RNU6-219P-201ENST00000364728 107 ntBASIC1.87□□□□□ -2.11
RNF38Q9H0F5 RNU6-1276P-201ENST00000365372 104 ntBASIC1.87□□□□□ -2.11
RNF38Q9H0F5 RNU6-675P-201ENST00000384236 104 ntBASIC1.87□□□□□ -2.11
RNF38Q9H0F5 Y_RNA.567-201ENST00000384736 106 ntBASIC1.87□□□□□ -2.11
RNF38Q9H0F5 RNU1-98P-201ENST00000458992 160 ntBASIC1.87□□□□□ -2.11
RNF38Q9H0F5 AC079140.2-201ENST00000506193 142 ntBASIC1.87□□□□□ -2.11
RNF38Q9H0F5 RNU6-947P-201ENST00000516264 106 ntBASIC1.87□□□□□ -2.11
RNF38Q9H0F5 RNU6-250P-201ENST00000516958 103 ntBASIC1.87□□□□□ -2.11
RNF38Q9H0F5 MTND5P40-201ENST00000559945 246 ntBASIC1.87□□□□□ -2.11
RNF38Q9H0F5 AL096861.1-201ENST00000610899 123 ntBASIC1.87□□□□□ -2.11
RNF38Q9H0F5 WWP1P1-201ENST00000466609 2769 ntBASIC1.87□□□□□ -2.11
RNF38Q9H0F5 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
RNF38Q9H0F5 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
RNF38Q9H0F5 RNU6-1244P-201ENST00000363614 108 ntBASIC1.86□□□□□ -2.11
RNF38Q9H0F5 Y_RNA.191-201ENST00000363972 113 ntBASIC1.86□□□□□ -2.11
RNF38Q9H0F5 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.86□□□□□ -2.11
RNF38Q9H0F5 MIR3122-201ENST00000577243 73 ntBASIC1.86□□□□□ -2.11
RNF38Q9H0F5 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.86□□□□□ -2.11
RNF38Q9H0F5 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.86□□□□□ -2.11
RNF38Q9H0F5 RNU6-90P-201ENST00000606352 106 ntBASIC1.86□□□□□ -2.11
RNF38Q9H0F5 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.86□□□□□ -2.11
RNF38Q9H0F5 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
RNF38Q9H0F5 Y_RNA.98-201ENST00000363109 102 ntBASIC1.85□□□□□ -2.11
RNF38Q9H0F5 SNORA16.1-201ENST00000364597 132 ntBASIC1.85□□□□□ -2.11
RNF38Q9H0F5 RNA5SP190-201ENST00000365222 118 ntBASIC1.85□□□□□ -2.11
RNF38Q9H0F5 SNORA17.3-201ENST00000391159 129 ntBASIC1.85□□□□□ -2.11
RNF38Q9H0F5 RNU1-78P-201ENST00000391248 165 ntBASIC1.85□□□□□ -2.11
RNF38Q9H0F5 Y_RNA.609-201ENST00000410669 89 ntBASIC1.85□□□□□ -2.11
RNF38Q9H0F5 Y_RNA.620-201ENST00000411009 88 ntBASIC1.85□□□□□ -2.11
RNF38Q9H0F5 AC244023.1-201ENST00000426884 112 ntBASIC1.85□□□□□ -2.11
RNF38Q9H0F5 SNORA25.15-201ENST00000516487 89 ntBASIC1.85□□□□□ -2.11
RNF38Q9H0F5 AC133485.1-201ENST00000567176 124 ntBASIC1.85□□□□□ -2.11
RNF38Q9H0F5 MIR5588-201ENST00000581890 63 ntBASIC1.85□□□□□ -2.11
RNF38Q9H0F5 MIR4422-201ENST00000581938 83 ntBASIC1.85□□□□□ -2.11
RNF38Q9H0F5 AC242498.1-201ENST00000604134 111 ntBASIC1.85□□□□□ -2.11
RNF38Q9H0F5 PRELID3BP2-201ENST00000605362 201 ntBASIC1.85□□□□□ -2.11
RNF38Q9H0F5 AL662814.1-201ENST00000617364 121 ntBASIC1.85□□□□□ -2.11
RNF38Q9H0F5 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
RNF38Q9H0F5 MIR588-201ENST00000384900 83 ntBASIC1.84□□□□□ -2.11
RNF38Q9H0F5 MIR1255A-201ENST00000408338 113 ntBASIC1.84□□□□□ -2.11
RNF38Q9H0F5 RNU6-447P-201ENST00000410293 104 ntBASIC1.84□□□□□ -2.11
RNF38Q9H0F5 RNU6-1118P-201ENST00000410382 104 ntBASIC1.84□□□□□ -2.11
RNF38Q9H0F5 RNU6-1076P-201ENST00000410397 104 ntBASIC1.84□□□□□ -2.11
RNF38Q9H0F5 RNU6-355P-201ENST00000410427 104 ntBASIC1.84□□□□□ -2.11
RNF38Q9H0F5 RNU6-791P-201ENST00000410467 104 ntBASIC1.84□□□□□ -2.11
RNF38Q9H0F5 RNU6-705P-201ENST00000410601 104 ntBASIC1.84□□□□□ -2.11
RNF38Q9H0F5 RNU6-1100P-201ENST00000410691 104 ntBASIC1.84□□□□□ -2.11
RNF38Q9H0F5 RNU6-860P-201ENST00000410860 104 ntBASIC1.84□□□□□ -2.11
RNF38Q9H0F5 RNU6-1217P-201ENST00000411276 104 ntBASIC1.84□□□□□ -2.11
RNF38Q9H0F5 RNU6-785P-201ENST00000411324 104 ntBASIC1.84□□□□□ -2.11
RNF38Q9H0F5 Y_RNA.685-201ENST00000516532 108 ntBASIC1.84□□□□□ -2.11
RNF38Q9H0F5 AC019176.1-201ENST00000518519 225 ntBASIC1.84□□□□□ -2.11
RNF38Q9H0F5 AC020891.4-201ENST00000605745 93 ntBASIC1.84□□□□□ -2.11
RNF38Q9H0F5 U6.90-201ENST00000614007 104 ntBASIC1.84□□□□□ -2.11
RNF38Q9H0F5 AC012676.2-201ENST00000619258 186 ntBASIC1.84□□□□□ -2.11
RNF38Q9H0F5 U6.70-201ENST00000620287 104 ntBASIC1.84□□□□□ -2.11
RNF38Q9H0F5 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.84□□□□□ -2.11
RNF38Q9H0F5 AP001362.1-201ENST00000625165 124 ntBASIC1.84□□□□□ -2.11
RNF38Q9H0F5 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.84□□□□□ -2.11
RNF38Q9H0F5 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.83□□□□□ -2.12
RNF38Q9H0F5 Y_RNA.611-201ENST00000410682 108 ntBASIC1.83□□□□□ -2.12
RNF38Q9H0F5 SNORD13-201ENST00000459299 104 ntBASIC1.83□□□□□ -2.12
RNF38Q9H0F5 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.83□□□□□ -2.12
RNF38Q9H0F5 MIR3937-201ENST00000580135 106 ntBASIC1.83□□□□□ -2.12
RNF38Q9H0F5 AP000942.3-201ENST00000603702 160 ntBASIC1.83□□□□□ -2.12
RNF38Q9H0F5 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
RNF38Q9H0F5 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
RNF38Q9H0F5 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.83□□□□□ -2.12
RNF38Q9H0F5 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.82□□□□□ -2.12
RNF38Q9H0F5 RNU6-979P-201ENST00000383896 107 ntBASIC1.82□□□□□ -2.12
RNF38Q9H0F5 SNORD38.2-201ENST00000384470 69 ntBASIC1.82□□□□□ -2.12
RNF38Q9H0F5 RNU6-1065P-201ENST00000384513 106 ntBASIC1.82□□□□□ -2.12
RNF38Q9H0F5 RNU6-205P-201ENST00000390858 107 ntBASIC1.82□□□□□ -2.12
RNF38Q9H0F5 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.82□□□□□ -2.12
RNF38Q9H0F5 MIR1302-7-201ENST00000408841 72 ntBASIC1.82□□□□□ -2.12
RNF38Q9H0F5 MIR4419B-201ENST00000577260 68 ntBASIC1.82□□□□□ -2.12
RNF38Q9H0F5 MIR3202-2-201ENST00000635980 79 ntBASIC1.82□□□□□ -2.12
RNF38Q9H0F5 Y_RNA.4-201ENST00000362333 112 ntBASIC1.81□□□□□ -2.12
RNF38Q9H0F5 snoU13.2-201ENST00000459201 104 ntBASIC1.81□□□□□ -2.12
RNF38Q9H0F5 AC090897.1-201ENST00000580909 226 ntBASIC1.81□□□□□ -2.12
RNF38Q9H0F5 MIR6740-201ENST00000618268 113 ntBASIC1.81□□□□□ -2.12
RNF38Q9H0F5 RNU6-1125P-201ENST00000363601 107 ntBASIC1.8□□□□□ -2.12
RNF38Q9H0F5 RNU6-949P-201ENST00000384040 107 ntBASIC1.8□□□□□ -2.12
RNF38Q9H0F5 Y_RNA.437-201ENST00000384113 113 ntBASIC1.8□□□□□ -2.12
RNF38Q9H0F5 MIR181B2-201ENST00000385004 89 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 188.6 ms