Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 AC093726.3-201ENST00000637588 150 ntBASIC-0.88□□□□□ -2.55
NKX6-2Q9C056 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-0.89□□□□□ -2.55
NKX6-2Q9C056 Y_RNA.318-201ENST00000365131 97 ntBASIC-0.89□□□□□ -2.55
NKX6-2Q9C056 MIR604-201ENST00000384880 94 ntBASIC-0.89□□□□□ -2.55
NKX6-2Q9C056 MIR616-201ENST00000385293 97 ntBASIC-0.89□□□□□ -2.55
NKX6-2Q9C056 AL445193.1-201ENST00000441183 141 ntBASIC-0.89□□□□□ -2.55
NKX6-2Q9C056 RNU7-195P-201ENST00000458793 62 ntBASIC-0.89□□□□□ -2.55
NKX6-2Q9C056 RNU6-561P-201ENST00000516222 102 ntBASIC-0.89□□□□□ -2.55
NKX6-2Q9C056 RNA5SP169-201ENST00000517268 117 ntBASIC-0.89□□□□□ -2.55
NKX6-2Q9C056 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-0.89□□□□□ -2.55
NKX6-2Q9C056 YWHAEP2-201ENST00000580066 112 ntBASIC-0.89□□□□□ -2.55
NKX6-2Q9C056 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-0.89□□□□□ -2.55
NKX6-2Q9C056 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.9□□□□□ -2.55
NKX6-2Q9C056 SNORD114-29-201ENST00000364819 70 ntBASIC-0.9□□□□□ -2.55
NKX6-2Q9C056 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.9□□□□□ -2.55
NKX6-2Q9C056 MIR1302-11-201ENST00000408051 138 ntBASIC-0.9□□□□□ -2.55
NKX6-2Q9C056 MIR1302-9-201ENST00000408365 138 ntBASIC-0.9□□□□□ -2.55
NKX6-2Q9C056 MIR1302-10-201ENST00000408734 138 ntBASIC-0.9□□□□□ -2.55
NKX6-2Q9C056 Y_RNA.632-201ENST00000459189 102 ntBASIC-0.9□□□□□ -2.55
NKX6-2Q9C056 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.9□□□□□ -2.55
NKX6-2Q9C056 MIR548AE1-201ENST00000583292 70 ntBASIC-0.9□□□□□ -2.55
NKX6-2Q9C056 MIR1302-2-201ENST00000607096 138 ntBASIC-0.9□□□□□ -2.55
NKX6-2Q9C056 snoU2_19.2-201ENST00000363024 80 ntBASIC-0.91□□□□□ -2.56
NKX6-2Q9C056 MIR539-201ENST00000365690 78 ntBASIC-0.91□□□□□ -2.56
NKX6-2Q9C056 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.91□□□□□ -2.56
NKX6-2Q9C056 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.91□□□□□ -2.56
NKX6-2Q9C056 RNU6-1289P-201ENST00000384431 106 ntBASIC-0.91□□□□□ -2.56
NKX6-2Q9C056 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.91□□□□□ -2.56
NKX6-2Q9C056 SNORD116-4-201ENST00000384733 96 ntBASIC-0.91□□□□□ -2.56
NKX6-2Q9C056 MT-TQ-201ENST00000387372 72 ntBASIC-0.91□□□□□ -2.56
NKX6-2Q9C056 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.91□□□□□ -2.56
NKX6-2Q9C056 AL603914.1-201ENST00000401964 204 ntBASIC-0.91□□□□□ -2.56
NKX6-2Q9C056 RNU6-175P-201ENST00000516896 107 ntBASIC-0.91□□□□□ -2.56
NKX6-2Q9C056 AC069503.3-201ENST00000618674 145 ntBASIC-0.91□□□□□ -2.56
NKX6-2Q9C056 SNORD115-2-201ENST00000362842 82 ntBASIC-0.92□□□□□ -2.56
NKX6-2Q9C056 RNU4-73P-201ENST00000363164 141 ntBASIC-0.92□□□□□ -2.56
NKX6-2Q9C056 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.92□□□□□ -2.56
NKX6-2Q9C056 RNU6-450P-201ENST00000364654 107 ntBASIC-0.92□□□□□ -2.56
NKX6-2Q9C056 SNORD115-20-201ENST00000365099 82 ntBASIC-0.92□□□□□ -2.56
NKX6-2Q9C056 SNORA63.7-201ENST00000365579 123 ntBASIC-0.92□□□□□ -2.56
NKX6-2Q9C056 RNU6-524P-201ENST00000384270 107 ntBASIC-0.92□□□□□ -2.56
NKX6-2Q9C056 RNY1P7-201ENST00000384743 110 ntBASIC-0.92□□□□□ -2.56
NKX6-2Q9C056 FGF7P6-202ENST00000451282 293 ntBASIC-0.92□□□□□ -2.56
NKX6-2Q9C056 SNORD19B-201ENST00000459623 84 ntBASIC-0.92□□□□□ -2.56
NKX6-2Q9C056 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-0.92□□□□□ -2.56
NKX6-2Q9C056 UBE2WP1-201ENST00000362030 340 ntBASIC-0.93□□□□□ -2.56
NKX6-2Q9C056 Y_RNA.16-201ENST00000362421 102 ntBASIC-0.93□□□□□ -2.56
NKX6-2Q9C056 Y_RNA.117-201ENST00000363294 101 ntBASIC-0.93□□□□□ -2.56
NKX6-2Q9C056 RNU6-728P-201ENST00000365375 104 ntBASIC-0.93□□□□□ -2.56
NKX6-2Q9C056 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.93□□□□□ -2.56
NKX6-2Q9C056 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.93□□□□□ -2.56
NKX6-2Q9C056 RNU6-154P-201ENST00000384306 106 ntBASIC-0.93□□□□□ -2.56
NKX6-2Q9C056 MIR519E-201ENST00000385075 84 ntBASIC-0.93□□□□□ -2.56
NKX6-2Q9C056 SNORD63B-201ENST00000411005 70 ntBASIC-0.93□□□□□ -2.56
NKX6-2Q9C056 AC074198.2-201ENST00000508153 258 ntBASIC-0.93□□□□□ -2.56
NKX6-2Q9C056 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.93□□□□□ -2.56
NKX6-2Q9C056 MIR548AG2-201ENST00000581228 64 ntBASIC-0.93□□□□□ -2.56
NKX6-2Q9C056 Y_RNA.31-201ENST00000362574 102 ntBASIC-0.94□□□□□ -2.56
NKX6-2Q9C056 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.94□□□□□ -2.56
NKX6-2Q9C056 MIR196A1-201ENST00000388006 70 ntBASIC-0.94□□□□□ -2.56
NKX6-2Q9C056 AC098614.3-201ENST00000438957 440 ntBASIC-0.94□□□□□ -2.56
NKX6-2Q9C056 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-0.94□□□□□ -2.56
NKX6-2Q9C056 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-0.94□□□□□ -2.56
NKX6-2Q9C056 AL132765.2-201ENST00000610812 351 ntBASIC-0.94□□□□□ -2.56
NKX6-2Q9C056 Y_RNA.142-201ENST00000363491 102 ntBASIC-0.95□□□□□ -2.56
NKX6-2Q9C056 MIR9-2-201ENST00000384838 87 ntBASIC-0.95□□□□□ -2.56
NKX6-2Q9C056 MIR519A1-201ENST00000385257 85 ntBASIC-0.95□□□□□ -2.56
NKX6-2Q9C056 RNU7-48P-201ENST00000458875 63 ntBASIC-0.95□□□□□ -2.56
NKX6-2Q9C056 MIR1270-201ENST00000459320 83 ntBASIC-0.95□□□□□ -2.56
NKX6-2Q9C056 SNORD116-25-201ENST00000516517 92 ntBASIC-0.95□□□□□ -2.56
NKX6-2Q9C056 MIR4460-201ENST00000577862 86 ntBASIC-0.95□□□□□ -2.56
NKX6-2Q9C056 RNU6-978P-201ENST00000364371 103 ntBASIC-0.96□□□□□ -2.56
NKX6-2Q9C056 Y_RNA.275-201ENST00000364726 110 ntBASIC-0.96□□□□□ -2.56
NKX6-2Q9C056 Y_RNA.315-201ENST00000365117 102 ntBASIC-0.96□□□□□ -2.56
NKX6-2Q9C056 RNU6-901P-201ENST00000384593 106 ntBASIC-0.96□□□□□ -2.56
NKX6-2Q9C056 MIR204-201ENST00000385200 110 ntBASIC-0.96□□□□□ -2.56
NKX6-2Q9C056 MIR624-201ENST00000385217 97 ntBASIC-0.96□□□□□ -2.56
NKX6-2Q9C056 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.96□□□□□ -2.56
NKX6-2Q9C056 SNORA40.15-201ENST00000516884 107 ntBASIC-0.96□□□□□ -2.56
NKX6-2Q9C056 AP000676.1-201ENST00000533307 52 ntBASIC-0.96□□□□□ -2.56
NKX6-2Q9C056 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-0.96□□□□□ -2.56
NKX6-2Q9C056 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-0.96□□□□□ -2.56
NKX6-2Q9C056 RNU6-170P-201ENST00000362832 104 ntBASIC-0.97□□□□□ -2.56
NKX6-2Q9C056 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.97□□□□□ -2.56
NKX6-2Q9C056 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.97□□□□□ -2.56
NKX6-2Q9C056 MIR206-201ENST00000384872 86 ntBASIC-0.97□□□□□ -2.56
NKX6-2Q9C056 MIR617-201ENST00000385030 97 ntBASIC-0.97□□□□□ -2.56
NKX6-2Q9C056 RNU6-381P-201ENST00000391259 108 ntBASIC-0.97□□□□□ -2.56
NKX6-2Q9C056 MIR548I2-201ENST00000408348 149 ntBASIC-0.97□□□□□ -2.56
NKX6-2Q9C056 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.97□□□□□ -2.56
NKX6-2Q9C056 AC093423.1-201ENST00000440817 142 ntBASIC-0.97□□□□□ -2.56
NKX6-2Q9C056 RNU6-758P-201ENST00000516292 89 ntBASIC-0.97□□□□□ -2.56
NKX6-2Q9C056 SCARNA24.2-201ENST00000516968 130 ntBASIC-0.97□□□□□ -2.56
NKX6-2Q9C056 MIR3681-201ENST00000580089 72 ntBASIC-0.97□□□□□ -2.56
NKX6-2Q9C056 AC108676.2-201ENST00000605225 163 ntBASIC-0.97□□□□□ -2.56
NKX6-2Q9C056 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.98□□□□□ -2.57
NKX6-2Q9C056 SNORD56B-201ENST00000384713 71 ntBASIC-0.98□□□□□ -2.57
NKX6-2Q9C056 SNORD83B-201ENST00000386745 93 ntBASIC-0.98□□□□□ -2.57
NKX6-2Q9C056 RNU4-43P-201ENST00000410628 137 ntBASIC-0.98□□□□□ -2.57
NKX6-2Q9C056 RNU4-63P-201ENST00000411313 118 ntBASIC-0.98□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 276.9 ms